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View Full Version : Arab, M142638, pigmentation SNPs and Eurogenes K13



Fire Haired
04-29-2014, 10:37 PM
This is a personal message.

Kit number: M142638

> 1.Eye color: Hazel, light brown >
> 2.Hair color: Black
>
> 3.Skin color: light but not wight. Middle eastern light color.
>
> 4.Brief on relative's pigmentation: my mother and father are light like me. I have two brothers with darker skin. My sister is light. My Antes and ancule are between light and dark.... Dark is not black
>
> 5.Tanning ability: I have ability to get tan easly as 30min under the sun will make different. It give me dark nick and armes as they are exposed
>
> 6.Nations, ethnic groups, etc. you descend from: Saudi Arabia, Arab J1 L222 (FGC4,2) male side
Female side is J1d1a


Eurogenes K13 Oracle results:

K13 Oracle ref data revised 19 Mar 2014

Kit M142638

Admix Results (sorted):


<tbody>
#
Population
Percent


1
East_Med
30.74


2
Red_Sea
28.23


3
Northeast_African
13.67


4
Sub-Saharan
10.16


5
West_Asian
7.52


6
South_Asian
5.7


7
West_Med
3.36


8
Siberian
0.62

</tbody>

Single Population Sharing:


<tbody>
#
Population (source)
Distance


1
Egyptian
15.74


2
Bedouin
17.61


3
Saudi
19.93


4
Jordanian
22.88


5
Palestinian
23.87


6
Yemenite_Jewish
23.97


7
Tunisian
24.43


8
Algerian
24.58


9
Moroccan
25.52


10
Mozabite_Berber
25.9


11
Syrian
26.23


12
Libyan_Jewish
28.85


13
Samaritan
29.53


14
Lebanese_Muslim
29.77


15
Tunisian_Jewish
29.98


16
Lebanese_Christian
31.82


17
Lebanese_Druze
32.97


18
Algerian_Jewish
33.28


19
Sephardic_Jewish
33.28


20
Iranian_Jewish
33.31

</tbody>

Mixed Mode Population Sharing:


<tbody>
#

Primary Population (source)
Secondary Population (source)
Distance


1

74.8%
Saudi
+
25.2%
Sandawe
@
5.46


2

78.7%
Saudi
+
21.3%
Sudanese
@
5.49


3

74.9%
Saudi
+
25.1%
Maasai
@
5.99


4

79.2%
Saudi
+
20.8%
San
@
6.08


5

79%
Saudi
+
21%
Ethiopian_Anuak
@
6.12


6

78.2%
Saudi
+
21.8%
Hadza
@
6.62


7

80.8%
Saudi
+
19.2%
Mbuti_Pygmy
@
7.52


8

80.7%
Saudi
+
19.3%
Ethiopian_Gumuz
@
8.67


9

81.8%
Saudi
+
18.2%
Bantu_N.E.
@
8.96


10

82.1%
Saudi
+
17.9%
Luhya
@
9.05


11

83.5%
Saudi
+
16.5%
Biaka_Pygmy
@
9.99


12

84.8%
Saudi
+
15.2%
Bantu_S.E.
@
11.1


13

72.5%
Yemenite_Jewish
+
27.5%
Maasai
@
11.23


14

85.2%
Saudi
+
14.8%
Bantu_S.W.
@
11.4


15

80.7%
Bedouin
+
19.3%
Maasai
@
11.44


16

81.5%
Saudi
+
18.5%
Ethiopian_Ari_cultivator
@
11.85


17

72.8%
Yemenite_Jewish
+
27.2%
Sandawe
@
11.89


18

77.5%
Yemenite_Jewish
+
22.5%
San
@
11.93


19

74.3%
Saudi
+
25.7%
Ethiopian_Oromo
@
12.05


20

81.3%
Bedouin
+
18.7%
Sandawe
@
12.06


</tbody>


<tbody>
8-plex SNPs
Gene
Ancestral
Derived
M142638
Loschbour
La Brana-1
Motala12
Stuttgart
Africa
Asia
Europe



rs1291382
HERC2
?
?
?
G/G
?
G/G (1x)
A/A
?
?
?



rs1545397
OCA2
A
T
?
A/A
A(1x)
?
A/A
97<a< td=""></a<>
8<a< td=""></a<>
92<a< td=""></a<>



rs16891982
SLC45A2
C
G
C/C
C/C
CC(6x)
?
C/C
?
?
96<g< td=""></g<>



rs885479
MC1R
G
A
G/G
?
G(6x)
?
?
99<g< td=""></g<>
35<g< td=""></g<>
92<g< td=""></g<>



rs1426654
SLC24A5
G
A
A/A
G/G
G/G(3x)
A/A (3x)
A/A
?
?
100<a< td=""></a<>



rs12896399
SLC45A2
G
T
G/G
G/G
?
?
T/T
?
?
?



rs6119471
ASIP
G
C
?
C/C
C(3x)
C/C (3x)
C/C
36<c< td=""></c<>
100<c< td=""></c<>
100<c< td=""></c<>



rs12203592
IRF4
C
T
C/C
T/T
CT(1x,2x)
T/T (3x)
C/C
1<t< td=""></t<>
0<t< td=""></t<>
11<t< td=""></t<>

































Hirisplex SNPs
Gene
Ancestral
Derived

Loschbour
La Brana-1
Motala12
Stuttgart
Africa
Asia
Europe



N29insA
MC1R
C
A
?
C/C
C(10x)
C/C(5x)
C/C
?
?
?



rs11547464
MC1R
G
A
G/G
G/G
G(7x
?
G/G
100<g< td=""></g<>
100<g< td=""></g<>
99<g< td=""></g<>



rs885479
MC1R
G
A
G/G
?
G(6x)
?
?
99<g< td=""></g<>
35<g< td=""></g<>
92<g< td=""></g<>



rs1805008
MC1R
C
T
C/C
C/C
C(6x)
C/C (2x)
C/C
99<c< td=""></c<>
100<c< td=""></c<>
93<c< td=""></c<>



rs1805005
MC1R
G
T
G/G
G/G
G(12x)
G/G (6x)
G/G
99<g< td=""></g<>
100<g< td=""></g<>
89<g< td=""></g<>



rs1805006
MC1R
C
A
C/C
C/C
C(11x)
C/C (6x)
C/C
100<c< td=""></c<>
100<c< td=""></c<>
99<c< td=""></c<>



rs1805007
MC1R
C
T
C/C
C/C
C(8x)
?
C/C
100<c< td=""></c<>
100<c< td=""></c<>
92<c< td=""></c<>



rs1805009
MC1R
G
C
?
G/G
G(5x)
G/G (4x)
G/G
100<g< td=""></g<>
100<g< td=""></g<>
99<g< td=""></g<>



Y152OCH
MC1R
C
A
?
C/C
C(7x)
?
C/C
?
?
?



rs2228479
MC1R
G
A
A/A
G/G
G(11x)
G/G (4x
G/G
100<g< td=""></g<>
76<g< td=""></g<>
93<g< td=""></g<>



rs1110400
MC1R
T
C
T/T
C/C
T(8x)
?
C/C
100<t< td=""></t<>
100<t< td=""></t<>
100<t< td=""></t<>



rs28777
SLC45A2
C
A
A/A
C/A
C(8x)
A/A (4x)
C/C
80<c< td=""></c<>
88<c< td=""></c<>
2<c< td=""></c<>



rs16891982
SLC45A2
C
G
C/C
C/C
CC(6x)
?
C/C
?
?
96<g< td=""></g<>



rs12821256
KITLG
T
C
T/T
T/T
T(8x)
T/T (3x)
T/T
100<t< td=""></t<>
100<t< td=""></t<>
86<t< td=""></t<>



rs4959270
EXOC2
C
A
C/C
A/A
C(7x)
A/A (1x)
C/C
81<c< td=""></c<>
66<c< td=""></c<>
53<c< td=""></c<>



rs12203592
IRF4
C
T
C/C
T/T
CT(1x,2x)
T/T (3x)
C/C
1<t< td=""></t<>
0<t< td=""></t<>
11<t< td=""></t<>



rs1042602
TYR
C
A
A/C
C/C
C(6x)
C/C (3x)
C/A
99<c< td=""></c<>
100<c< td=""></c<>
63<c< td=""></c<>



rs1800407
OCA2
C
T
C/C
C/C
C(12x)
C/C()1x)
C/C
100<c< td=""></c<>
100<c< td=""></c<>
92<c< td=""></c<>



rs2402130
SLC45A2
G
A
A/G
G/A
GA(2x,4x)
A/A (1x)
G/G
41<a< td=""></a<>
93<a< td=""></a<>
77<a< td=""></a<>



rs12913832
OCA2-HERC2
A
G
A/G
G/G
G(3x)
G/G (1x)
A/A
4<g< td=""></g<>
0<g< td=""></g<>
71<g< td=""></g<>



rs2378249
ASIP/PIGU
A
G
A/A
A/A
A(6x)
A/A (1x)
A/A
86<a< td=""></a<>
85<a< td=""></a<>
88<a< td=""></a<>



rs12896399
SLC45A2
G
T
G/G
G/G
?
?
T/T
?
?
?



rs1393350
TYR
G
A
G/G
G/G
G(6x)
G/G (4x)
G/G
99<g< td=""></g<>
100<g< td=""></g<>
76<g< td=""></g<>



rs683
TYRP1
A
C
A/C
A/A
A(1x)
A/A (1x)
A/A
13<a< td=""></a<>
1<a< td=""></a<>
63<a< td=""></a<>

































SNP
Gene
Ancestral
Derived
M142638
Loschbour
La brana-1
Motala12
Stuttgart
Africa
Asia
Europe



rs4778241
OCA2-HERC2
A
C
C/C
C/C
C(7x)
C/C (5x)
A/C
40<c< td=""></c<>
23<c< td=""></c<>
78<c< td=""></c<>



rs1129038
OCA2-HERC2
C
T
C/T
T/T
T(5x)
T/T (3x)
C/C
4<t< td=""></t<>
0<t< td=""></t<>
71<t< td=""></t<>



rs12593929
OCA2-HERC2
G
A
?
A/A
A(7x)
A/A (2x)
A/A
37<a< td=""></a<>
58<a< td=""></a<>
97<a< td=""></a<>



rs12913832
OCA2-HERC2
A
G
A/G
G/G
G(3x)
G/G (1x)
A/A
4<g< td=""></g<>
0<g< td=""></g<>
71<g< td=""></g<>



rs7183877
OCA2-HERC2
C
A
C/C
C/C
C(1x)
?
C/C
92<c< td=""></c<>
70<c< td=""></c<>
90<c< td=""></c<>



rs3935591
OCA2-HERC2
T
C
?
C/C
C(9x)
T/C (7x)
C/C
21<c< td=""></c<>
27<c< td=""></c<>
82<c< td=""></c<>



rs7170852
OCA2-HERC2
T
A
?
A/A
A(9x)
A/A (7x)
A/A
20<a< td=""></a<>
27<a< td=""></a<>
81<a< td=""></a<>



rs2238289
OCA2-HERC2
A
G
?
A/A
A(3x)
A/A (3x)
A/A
32<a< td=""></a<>
29<a< td=""></a<>
84<a< td=""></a<>



rs3940272
OCA2-HERC2
T
G
?
G/G
G(1x)
?
?
21<g< td=""></g<>
27<g< td=""></g<>
81<g< td=""></g<>



rs8028689
OCA2-HERC2
C
T
?
T/T
T(3x)
T/T (2x)
T/T
59<t< td=""></t<>
61<t< td=""></t<>
93<t< td=""></t<>



rs2240203
OCA2-HERC2
C
T
?
T/T
T(3x)
T/T (5x)
T/T
36<t< td=""></t<>
61<t< td=""></t<>
93<t< td=""></t<>



rs11631797
OCA2-HERC2
A
G
?
G/G
G(4x)
?
G/G
18<g< td=""></g<>
26<g< td=""></g<>
80<g< td=""></g<>



rs916977
OCA2-HERC2
T
C
C/C
C/C
C(9x
C/C (2x)
C/C
10<c< td=""></c<>
26<c< td=""></c<>
81<c< td=""></c<>



Haplotype



h1
h1























Haplotype
Blue eye allele
SNP
Gene
Ancestral
Derived
Loschbour
La Brana-1
Motala12
Stuttgart
Africa
Asia
Europe


BEH1
A
rs4778138
OCA2-HERC2
?
?
A/A
?
A/A (3x)
A/G
?
?



BEH1
C
rs4778241
OCA2-HERC2
A
C
C/C
C(7x)
C/C (5x)
A/C
40<c< td=""></c<>
23<c< td=""></c<>
78<c< td=""></c<>


BEH1
A
rs7495174
OCA2-HERC2
?
?
A/A
?
A/A (1x)
A/A
?
?
?


BEH2
T
rs1129038
OCA2-HERC2
?
?
T/T
?
T/T (3x)
C/C
?
?
?


BEH2
G
rs1291382
HERC2
?
?
G/G
?
G/G (1x)
A/A
?
?
?


BEH2
C
rs916977
OCA2-HERC2
T
C
C/C
C(9x
C/C (2x)
C/C
10<c< td=""></c<>
26<c< td=""></c<>
81<c< td=""></c<>


BEH2
T
rs1667394
?
?
?
T/T
?
T/T (4x)
T/T
?
?
?


</tbody>