Fire Haired
05-01-2014, 01:41 AM
Note to self: Check word documents titled with these kit numbers.
<tbody>
Hirisplex SNPs
Gene
Ancestral
Derived
M212746
M751841
M144730
M374546
Loschbour
La Brana-1
Motala12
Stuttgart
Africa
Asia
Europe
N29insA
MC1R
C
A
?
?
?
?
C/C
C(10x)
C/C(5x)
C/C
?
?
?
rs11547464
MC1R
G
A
G/G
G/G
G/G
G/G
G/G
G(7x
?
G/G
100<G
100<G
99<G
rs885479
MC1R
G
A
G/G
G/G
G/G
G/G
?
G(6x)
?
?
99<G
35<G
92<G
rs1805008
MC1R
C
T
C/C
C/C
C/C
C/T
C/C
C(6x)
C/C (2x)
C/C
99<C
100<C
93<C
rs1805005
MC1R
G
T
G/G
G/G
G/T
G/G
G/G
G(12x)
G/G (6x)
G/G
99<G
100<G
89<G
rs1805006
MC1R
C
A
C/C
C/C
C/C
C/C
C/C
C(11x)
C/C (6x)
C/C
100<C
100<C
99<C
rs1805007
MC1R
C
T
C/T
C/C
C/C
C/C
C/C
C(8x)
?
C/C
100<C
100<C
92<C
rs1805009
MC1R
G
C
?
?
?
?
G/G
G(5x)
G/G (4x)
G/G
100<G
100<G
99<G
Y152OCH
MC1R
C
A
?
?
?
?
C/C
C(7x)
?
C/C
?
?
?
rs2228479
MC1R
G
A
G/G
C/C
G/G
G/G
G/G
G(11x)
G/G (4x
G/G
100<G
76<G
93<G
rs1110400
MC1R
T
C
T/T
T/T
T/T
T/T
C/C
T(8x)
?
C/C
100<T
100<T
100<T
rs28777
SLC45A2
C
A
A/C
A/A
A/C
A/A
C/A
C(8x)
A/A (4x)
C/C
80<C
88<C
2<C
rs16891982
SLC45A2
C
G
C/G
G/G
C/G
G/G
C/C
CC(6x)
?
C/C
?
?
96<G
rs12821256
KITLG
T
C
T/T
T/T
T/T
T/T
T/T
T(8x)
T/T (3x)
T/T
100<T
100<T
86<T
rs4959270
EXOC2
C
A
C/C
C/C
A/C
A/C
A/A
C(7x)
A/A (1x)
C/C
81<C
66<C
53<C
rs12203592
IRF4
C
T
C/C
C/C
C/C
C/C
T/T
CT(1x,2x)
T/T (3x)
C/C
1<T
0<T
11<T
rs1042602
TYR
C
A
C/C
A/C
C/C
A/C
C/C
C(6x)
C/C (3x)
C/A
99<C
100<C
63<C
rs1800407
OCA2
C
T
C/C
?
C/C
C/C
C/C
C(12x)
C/C()1x)
C/C
100<C
100<C
92<C
rs2402130
SLC45A2
G
A
A/A
A/A
A/A
A/G
G/A
GA(2x,4x)
A/A (1x)
G/G
41<A
93<A
77<A
rs12913832
OCA2-HERC2
A
G
G/G
A/G
G/G
A/G
G/G
G(3x)
G/G (1x)
A/A
4<G
0<G
71<G
rs2378249
ASIP/PIGU
A
G
A/A
A/G
A/G
A/A
A/A
A(6x)
A/A (1x)
A/A
86<A
85<A
88<A
rs12896399
SLC45A2
G
T
G/G
G/G
T/T
G/T
G/G
?
?
T/T
?
?
?
rs1393350
TYR
G
A
G/A
G/A
G/G
G/A
G/G
G(6x)
G/G (4x)
G/G
99<G
100<G
76<G
rs683
TYRP1
A
C
A/C
A/A
A/A
A/C
A/A
A(1x)
A/A (1x)
A/A
13<A
1<A
63<A
Haplotype
Blue eye allele
SNP
Gene
Ancestral
Derived
M212746
M751841
M144730
M374546
Loschbour
La Brana-1
Motala12
Stuttgart
Africa
BEH1
A
rs4778138
OCA2-HERC2
?
?
A/A
A/A
A/A
A/A
A/A
?
A/A (3x)
A/G
?
BEH1
C
rs4778241
OCA2-HERC2
A
C
C/C
A/C
C/C
C/C
C/C
C(7x)
C/C (5x)
A/C
40<C
BEH1
A
rs7495174
OCA2-HERC2
?
?
A/A
A/A
A/A
A/A
A/A
?
A/A (1x)
A/A
?
BEH2
T
rs1129038
OCA2-HERC2
?
?
T/T
C/T
T/T
C/T
T/T
?
T/T (3x)
C/C
?
BEH2
G
rs1291382
HERC2
?
?
?
?
?
?
G/G
?
G/G (1x)
A/A
?
BEH2
C
rs916977
OCA2-HERC2
T
C
C/C
C/T
C/C
C/C
C/C
C(9x
C/C (2x)
C/C
10<C
BEH2
T
rs1667394
?
?
?
T/T
C/T
T/T
T/T
T/T
?
T/T (4x)
T/T
?
SNP
Gene
Ancestral
Derived
M212746
M751841
M144730
M374546
Loschbour
La brana-1
Motala12
Stuttgart
Africa
Asia
Europe
rs4778241
OCA2-HERC2
A
C
C/C
A/C
C/C
C/C
C/C
C(7x)
C/C (5x)
A/C
40<C
23<C
78<C
rs1129038
OCA2-HERC2
C
T
T/T
C/T
T/T
C/T
T/T
T(5x)
T/T (3x)
C/C
4<T
0<T
71<T
rs12593929
OCA2-HERC2
G
A
?
?
?
?
A/A
A(7x)
A/A (2x)
A/A
37<A
58<A
97<A
rs12913832
OCA2-HERC2
A
G
G/G
A/G
G/G
A/G
G/G
G(3x)
G/G (1x)
A/A
4<G
0<G
71<G
rs7183877
OCA2-HERC2
C
A
C/C
C/A
C/C
C/C
C/C
C(1x)
?
C/C
92<C
70<C
90<C
rs3935591
OCA2-HERC2
T
C
?
?
?
?
C/C
C(9x)
T/C (7x)
C/C
21<C
27<C
82<C
rs7170852
OCA2-HERC2
T
A
?
?
?
?
A/A
A(9x)
A/A (7x)
A/A
20<A
27<A
81<A
rs2238289
OCA2-HERC2
A
G
?
?
?
?
A/A
A(3x)
A/A (3x)
A/A
32<A
29<A
84<A
rs3940272
OCA2-HERC2
T
G
?
?
?
?
G/G
G(1x)
?
?
21<G
27<G
81<G
rs8028689
OCA2-HERC2
C
T
?
?
?
?
T/T
T(3x)
T/T (2x)
T/T
59<T
61<T
93<T
rs2240203
OCA2-HERC2
C
T
?
?
?
?
T/T
T(3x)
T/T (5x)
T/T
36<T
61<T
93<T
rs11631797
OCA2-HERC2
A
G
?
?
?
?
G/G
G(4x)
?
G/G
18<G
26<G
80<G
rs916977
OCA2-HERC2
T
C
C/C
C/T
C/C
C/C
C/C
C(9x
C/C (2x)
C/C
10<C
26<C
81<C
Haplotype
h1
h1
h1
h1
8-plex SNPs
Gene
Ancestral
Derived
M212746
M751841
M144730
M374546
Loschbour
La Brana-1
Motala12
Stuttgart
Africa
Asia
Europe
rs1291382
HERC2
?
?
?
?
?
?
G/G
?
G/G (1x)
A/A
?
?
?
rs1545397
OCA2
A
T
?
?
?
?
A/A
A(1x)
?
A/A
97<A
8<A
92<A
rs16891982
SLC45A2
C
G
C/G
G/G
C/G
G/G
C/C
CC(6x)
?
C/C
?
?
96<G
rs885479
MC1R
G
A
G/G
G/G
G/G
G/G
?
G(6x)
?
?
99<G
35<G
92<G
rs1426654
SLC24A5
G
A
A/A
A/A
A/A
A/A
G/G
G/G(3x)
A/A (3x)
A/A
?
?
100<A
rs12896399
SLC45A2
G
T
G/G
G/G
T/T
G/T
G/G
?
?
T/T
?
?
?
rs6119471
ASIP
G
C
?
?
?
?
C/C
C(3x)
C/C (3x)
C/C
36<C
100<C
100<C
rs12203592
IRF4
C
T
C/C
C/C
C/C
C/C
T/T
CT(1x,2x)
T/T (3x)
C/C
1<T
0<T
11<T
</tbody>
<tbody>
Hirisplex SNPs
Gene
Ancestral
Derived
M212746
M751841
M144730
M374546
Loschbour
La Brana-1
Motala12
Stuttgart
Africa
Asia
Europe
N29insA
MC1R
C
A
?
?
?
?
C/C
C(10x)
C/C(5x)
C/C
?
?
?
rs11547464
MC1R
G
A
G/G
G/G
G/G
G/G
G/G
G(7x
?
G/G
100<G
100<G
99<G
rs885479
MC1R
G
A
G/G
G/G
G/G
G/G
?
G(6x)
?
?
99<G
35<G
92<G
rs1805008
MC1R
C
T
C/C
C/C
C/C
C/T
C/C
C(6x)
C/C (2x)
C/C
99<C
100<C
93<C
rs1805005
MC1R
G
T
G/G
G/G
G/T
G/G
G/G
G(12x)
G/G (6x)
G/G
99<G
100<G
89<G
rs1805006
MC1R
C
A
C/C
C/C
C/C
C/C
C/C
C(11x)
C/C (6x)
C/C
100<C
100<C
99<C
rs1805007
MC1R
C
T
C/T
C/C
C/C
C/C
C/C
C(8x)
?
C/C
100<C
100<C
92<C
rs1805009
MC1R
G
C
?
?
?
?
G/G
G(5x)
G/G (4x)
G/G
100<G
100<G
99<G
Y152OCH
MC1R
C
A
?
?
?
?
C/C
C(7x)
?
C/C
?
?
?
rs2228479
MC1R
G
A
G/G
C/C
G/G
G/G
G/G
G(11x)
G/G (4x
G/G
100<G
76<G
93<G
rs1110400
MC1R
T
C
T/T
T/T
T/T
T/T
C/C
T(8x)
?
C/C
100<T
100<T
100<T
rs28777
SLC45A2
C
A
A/C
A/A
A/C
A/A
C/A
C(8x)
A/A (4x)
C/C
80<C
88<C
2<C
rs16891982
SLC45A2
C
G
C/G
G/G
C/G
G/G
C/C
CC(6x)
?
C/C
?
?
96<G
rs12821256
KITLG
T
C
T/T
T/T
T/T
T/T
T/T
T(8x)
T/T (3x)
T/T
100<T
100<T
86<T
rs4959270
EXOC2
C
A
C/C
C/C
A/C
A/C
A/A
C(7x)
A/A (1x)
C/C
81<C
66<C
53<C
rs12203592
IRF4
C
T
C/C
C/C
C/C
C/C
T/T
CT(1x,2x)
T/T (3x)
C/C
1<T
0<T
11<T
rs1042602
TYR
C
A
C/C
A/C
C/C
A/C
C/C
C(6x)
C/C (3x)
C/A
99<C
100<C
63<C
rs1800407
OCA2
C
T
C/C
?
C/C
C/C
C/C
C(12x)
C/C()1x)
C/C
100<C
100<C
92<C
rs2402130
SLC45A2
G
A
A/A
A/A
A/A
A/G
G/A
GA(2x,4x)
A/A (1x)
G/G
41<A
93<A
77<A
rs12913832
OCA2-HERC2
A
G
G/G
A/G
G/G
A/G
G/G
G(3x)
G/G (1x)
A/A
4<G
0<G
71<G
rs2378249
ASIP/PIGU
A
G
A/A
A/G
A/G
A/A
A/A
A(6x)
A/A (1x)
A/A
86<A
85<A
88<A
rs12896399
SLC45A2
G
T
G/G
G/G
T/T
G/T
G/G
?
?
T/T
?
?
?
rs1393350
TYR
G
A
G/A
G/A
G/G
G/A
G/G
G(6x)
G/G (4x)
G/G
99<G
100<G
76<G
rs683
TYRP1
A
C
A/C
A/A
A/A
A/C
A/A
A(1x)
A/A (1x)
A/A
13<A
1<A
63<A
Haplotype
Blue eye allele
SNP
Gene
Ancestral
Derived
M212746
M751841
M144730
M374546
Loschbour
La Brana-1
Motala12
Stuttgart
Africa
BEH1
A
rs4778138
OCA2-HERC2
?
?
A/A
A/A
A/A
A/A
A/A
?
A/A (3x)
A/G
?
BEH1
C
rs4778241
OCA2-HERC2
A
C
C/C
A/C
C/C
C/C
C/C
C(7x)
C/C (5x)
A/C
40<C
BEH1
A
rs7495174
OCA2-HERC2
?
?
A/A
A/A
A/A
A/A
A/A
?
A/A (1x)
A/A
?
BEH2
T
rs1129038
OCA2-HERC2
?
?
T/T
C/T
T/T
C/T
T/T
?
T/T (3x)
C/C
?
BEH2
G
rs1291382
HERC2
?
?
?
?
?
?
G/G
?
G/G (1x)
A/A
?
BEH2
C
rs916977
OCA2-HERC2
T
C
C/C
C/T
C/C
C/C
C/C
C(9x
C/C (2x)
C/C
10<C
BEH2
T
rs1667394
?
?
?
T/T
C/T
T/T
T/T
T/T
?
T/T (4x)
T/T
?
SNP
Gene
Ancestral
Derived
M212746
M751841
M144730
M374546
Loschbour
La brana-1
Motala12
Stuttgart
Africa
Asia
Europe
rs4778241
OCA2-HERC2
A
C
C/C
A/C
C/C
C/C
C/C
C(7x)
C/C (5x)
A/C
40<C
23<C
78<C
rs1129038
OCA2-HERC2
C
T
T/T
C/T
T/T
C/T
T/T
T(5x)
T/T (3x)
C/C
4<T
0<T
71<T
rs12593929
OCA2-HERC2
G
A
?
?
?
?
A/A
A(7x)
A/A (2x)
A/A
37<A
58<A
97<A
rs12913832
OCA2-HERC2
A
G
G/G
A/G
G/G
A/G
G/G
G(3x)
G/G (1x)
A/A
4<G
0<G
71<G
rs7183877
OCA2-HERC2
C
A
C/C
C/A
C/C
C/C
C/C
C(1x)
?
C/C
92<C
70<C
90<C
rs3935591
OCA2-HERC2
T
C
?
?
?
?
C/C
C(9x)
T/C (7x)
C/C
21<C
27<C
82<C
rs7170852
OCA2-HERC2
T
A
?
?
?
?
A/A
A(9x)
A/A (7x)
A/A
20<A
27<A
81<A
rs2238289
OCA2-HERC2
A
G
?
?
?
?
A/A
A(3x)
A/A (3x)
A/A
32<A
29<A
84<A
rs3940272
OCA2-HERC2
T
G
?
?
?
?
G/G
G(1x)
?
?
21<G
27<G
81<G
rs8028689
OCA2-HERC2
C
T
?
?
?
?
T/T
T(3x)
T/T (2x)
T/T
59<T
61<T
93<T
rs2240203
OCA2-HERC2
C
T
?
?
?
?
T/T
T(3x)
T/T (5x)
T/T
36<T
61<T
93<T
rs11631797
OCA2-HERC2
A
G
?
?
?
?
G/G
G(4x)
?
G/G
18<G
26<G
80<G
rs916977
OCA2-HERC2
T
C
C/C
C/T
C/C
C/C
C/C
C(9x
C/C (2x)
C/C
10<C
26<C
81<C
Haplotype
h1
h1
h1
h1
8-plex SNPs
Gene
Ancestral
Derived
M212746
M751841
M144730
M374546
Loschbour
La Brana-1
Motala12
Stuttgart
Africa
Asia
Europe
rs1291382
HERC2
?
?
?
?
?
?
G/G
?
G/G (1x)
A/A
?
?
?
rs1545397
OCA2
A
T
?
?
?
?
A/A
A(1x)
?
A/A
97<A
8<A
92<A
rs16891982
SLC45A2
C
G
C/G
G/G
C/G
G/G
C/C
CC(6x)
?
C/C
?
?
96<G
rs885479
MC1R
G
A
G/G
G/G
G/G
G/G
?
G(6x)
?
?
99<G
35<G
92<G
rs1426654
SLC24A5
G
A
A/A
A/A
A/A
A/A
G/G
G/G(3x)
A/A (3x)
A/A
?
?
100<A
rs12896399
SLC45A2
G
T
G/G
G/G
T/T
G/T
G/G
?
?
T/T
?
?
?
rs6119471
ASIP
G
C
?
?
?
?
C/C
C(3x)
C/C (3x)
C/C
36<C
100<C
100<C
rs12203592
IRF4
C
T
C/C
C/C
C/C
C/C
T/T
CT(1x,2x)
T/T (3x)
C/C
1<T
0<T
11<T
</tbody>