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View Full Version : PCA for Dodecad V3



MysteriousWays
08-24-2017, 10:23 PM
Please post your results for Dodecad v3 here. I will be making a new PCA for all who are interested.

de Burgh II
08-24-2017, 10:30 PM
Much obliged! :icon_cheers:
http://www.mtv.co.uk/sites/default/files/styles/image-w-760-scale/public/mtv_uk/galleries/large/2016/12/20/greatgatsby.gif?itok=h1txs6qU

Admix Results (sorted):

# Population Percent
1 West_European 52.72
2 Mediterranean 27.31
3 East_European 8.84
4 West_Asian 7.9
5 Southwest_Asian 1.68
6 Northeast_Asian 0.76
7 Northwest_African 0.44
8 South_Asian 0.17
9 Palaeo_African 0.12
10 Neo_African 0.06

Freeroostah
08-24-2017, 10:30 PM
Thanks man :thumb001:

(Kinda weird calculator tbh...)

# Population Percent
1 Mediterranean 31.69
2 West_European 25.48
3 West_Asian 20.89
4 East_European 11.32
5 Southwest_Asian 8.68
6 Northwest_African 1.23
7 East_African 0.37
8 Northeast_Asian 0.2
9 Southeast_Asian 0.15

MysteriousWays
08-24-2017, 10:31 PM
Thanks man :thumb001:

(Kinda weird calculator tbh...)

# Population Percent
1 Mediterranean 31.69
2 West_European 25.48
3 West_Asian 20.89
4 East_European 11.32
5 Southwest_Asian 8.68
6 Northwest_African 1.23
7 East_African 0.37
8 Northeast_Asian 0.2
9 Southeast_Asian 0.15

Yes it is, but many say it is good, so let's see for ourselves...

Dick
08-24-2017, 10:35 PM
I have 3


# Population Percent
1 West_European 33.32
2 Mediterranean 25.43
3 East_European 19.66
4 West_Asian 14.26
5 Southwest_Asian 5.16
6 Northeast_Asian 1.32
7 East_African 0.53
8 Southeast_Asian 0.32


# Population Percent
1 West_European 33.04
2 Mediterranean 27.99
3 East_European 18.58
4 West_Asian 13.3
5 Southwest_Asian 4.43
6 Northeast_Asian 2.05
7 Southeast_Asian 0.26
8 South_Asian 0.18
9 East_African 0.17

# Population Percent
1 West_European 33.73
2 Mediterranean 26.53
3 East_European 21.77
4 West_Asian 13.89
5 Southwest_Asian 3.71
6 Southeast_Asian 0.27
7 East_African 0.09

RN97
08-24-2017, 10:38 PM
This one really fits me!

Population
East_European 12.29
West_European 42.49
Mediterranean 27.57
Neo_African 0.11
West_Asian 13.05
South_Asian 1.30
Northeast_Asian 0.91
Southeast_Asian 0.05
East_African -
Southwest_Asian 1.82
Northwest_African 0.40
Palaeo_African -





# Primary Population (source) Secondary Population (source) Distance
1 52.7% Romanians_14 (Behar) + 47.3% Cornwall (1000 Genomes) @ 1.76
2 54.6% Mixed_Germanic (Dodecad) + 45.4% Romanians_14 (Behar) @ 1.87
3 55.1% Romanians_14 (Behar) + 44.9% Irish (Dodecad) @ 1.97
4 52.5% Dutch (Dodecad) + 47.5% Romanians_14 (Behar) @ 2
5 52.3% Romanians_14 (Behar) + 47.7% British (Dodecad) @ 2.02
6 71.1% Argyll (1000 Genomes) + 28.9% Greek (Dodecad) @ 2.06
7 50.1% Romanians_14 (Behar) + 49.9% Kent (1000 Genomes) @ 2.06
8 72.5% N._European (Xing) + 27.5% Greek (Dodecad) @ 2.11
9 55.5% Swedish (Dodecad) + 44.5% Greek (Dodecad) @ 2.17
10 52.2% Romanians_14 (Behar) + 47.8% British_Isles (Dodecad) @ 2.2
11 54.2% Norwegian (Dodecad) + 45.8% Greek (Dodecad) @ 2.59
12 74.3% German (Dodecad) + 25.7% S_Italian (Dodecad) @ 2.63
13 58.1% German (Dodecad) + 41.9% Tuscan (Xing) @ 2.72
14 72.6% German (Dodecad) + 27.4% S_Italian_Sicilian (Dodecad) @ 2.82
15 69.2% German (Dodecad) + 30.8% C_Italian (Dodecad) @ 2.9
16 58.3% German (Dodecad) + 41.7% TSI (HapMap) @ 2.91
17 69.9% Orkney (1000 Genomes) + 30.1% Greek (Dodecad) @ 2.99
18 64.7% German (Dodecad) + 35.3% O_Italian (Dodecad) @ 3.13
19 78.5% CEU (HapMap) + 21.5% Turkish (Dodecad) @ 3.13
20 73.6% German (Dodecad) + 26.4% Sicilian (Dodecad) @ 3.14

MysteriousWays
08-24-2017, 10:39 PM
Much obliged! :icon_cheers:
http://www.mtv.co.uk/sites/default/files/styles/image-w-760-scale/public/mtv_uk/galleries/large/2016/12/20/greatgatsby.gif?itok=h1txs6qU

Admix Results (sorted):

# Population Percent
1 West_European 52.72
2 Mediterranean 27.31
3 East_European 8.84
4 West_Asian 7.9
5 Southwest_Asian 1.68
6 Northeast_Asian 0.76
7 Northwest_African 0.44
8 South_Asian 0.17
9 Palaeo_African 0.12
10 Neo_African 0.06

Seems to do a better job separating out N. European populations but worse for S. European compared with puntDNAL k15. It is also better for Europe overall in terms of model fit than PuntDNAL is.
https://s5.postimg.org/ldsxw0xev/deburghii.png

MysteriousWays
08-24-2017, 10:45 PM
Thanks man :thumb001:

(Kinda weird calculator tbh...)

# Population Percent
1 Mediterranean 31.69
2 West_European 25.48
3 West_Asian 20.89
4 East_European 11.32
5 Southwest_Asian 8.68
6 Northwest_African 1.23
7 East_African 0.37
8 Northeast_Asian 0.2
9 Southeast_Asian 0.15

Here you are...Places you decently IMO despite a lack of SE European references.

https://s5.postimg.org/min01ejvr/freeroostah.png

Freeroostah
08-24-2017, 10:49 PM
Here you are...Places you decently IMO despite a lack of SE European references.

https://s5.postimg.org/min01ejvr/freeroostah.png

Yeah it makes more sense than the Oracle

MysteriousWays
08-24-2017, 10:50 PM
This one really fits me!

Population
East_European 12.29
West_European 42.49
Mediterranean 27.57
Neo_African 0.11
West_Asian 13.05
South_Asian 1.30
Northeast_Asian 0.91
Southeast_Asian 0.05
East_African -
Southwest_Asian 1.82
Northwest_African 0.40
Palaeo_African -





# Primary Population (source) Secondary Population (source) Distance
1 52.7% Romanians_14 (Behar) + 47.3% Cornwall (1000 Genomes) @ 1.76
2 54.6% Mixed_Germanic (Dodecad) + 45.4% Romanians_14 (Behar) @ 1.87
3 55.1% Romanians_14 (Behar) + 44.9% Irish (Dodecad) @ 1.97
4 52.5% Dutch (Dodecad) + 47.5% Romanians_14 (Behar) @ 2
5 52.3% Romanians_14 (Behar) + 47.7% British (Dodecad) @ 2.02
6 71.1% Argyll (1000 Genomes) + 28.9% Greek (Dodecad) @ 2.06
7 50.1% Romanians_14 (Behar) + 49.9% Kent (1000 Genomes) @ 2.06
8 72.5% N._European (Xing) + 27.5% Greek (Dodecad) @ 2.11
9 55.5% Swedish (Dodecad) + 44.5% Greek (Dodecad) @ 2.17
10 52.2% Romanians_14 (Behar) + 47.8% British_Isles (Dodecad) @ 2.2
11 54.2% Norwegian (Dodecad) + 45.8% Greek (Dodecad) @ 2.59
12 74.3% German (Dodecad) + 25.7% S_Italian (Dodecad) @ 2.63
13 58.1% German (Dodecad) + 41.9% Tuscan (Xing) @ 2.72
14 72.6% German (Dodecad) + 27.4% S_Italian_Sicilian (Dodecad) @ 2.82
15 69.2% German (Dodecad) + 30.8% C_Italian (Dodecad) @ 2.9
16 58.3% German (Dodecad) + 41.7% TSI (HapMap) @ 2.91
17 69.9% Orkney (1000 Genomes) + 30.1% Greek (Dodecad) @ 2.99
18 64.7% German (Dodecad) + 35.3% O_Italian (Dodecad) @ 3.13
19 78.5% CEU (HapMap) + 21.5% Turkish (Dodecad) @ 3.13
20 73.6% German (Dodecad) + 26.4% Sicilian (Dodecad) @ 3.14

You are a bit of an isolate but it puts you close to halfway between Norwegian and Romanian (tiny bit south shifted).

https://s5.postimg.org/6my5y3tbb/RN97.png

RN97
08-24-2017, 10:54 PM
You are a bit of an isolate but it puts you close to halfway between Norwegian and Romanian (tiny bit south shifted).

[IMG3tbb/RN97.png[/IMG]

I'm 1/8th German :)

Pahli
08-24-2017, 10:57 PM
# Population Percent
1 West_Asian 42.19
2 Mediterranean 21.35
3 Southwest_Asian 14.16
4 South_Asian 10.74
5 West_European 7.4
6 East_European 2.71
7 East_African 0.49
8 Northeast_Asian 0.45
9 Palaeo_African 0.22
10 Northwest_African 0.14
11 Neo_African 0.14

Dat fucking high South Asian tho lmao

MysteriousWays
08-24-2017, 11:04 PM
Mine...
https://s5.postimg.org/5bv03dn3b/image.png

Kelmendasi
08-24-2017, 11:04 PM
Thanks

Population
East_European 12.14
West_European 24.47
Mediterranean 37.23
Neo_African -
West_Asian 18.97
South_Asian -
Northeast_Asian -
Southeast_Asian -
East_African -
Southwest_Asian 6.68
Northwest_African 0.51
Palaeo_African

MysteriousWays
08-24-2017, 11:11 PM
# Population Percent
1 West_Asian 42.19
2 Mediterranean 21.35
3 Southwest_Asian 14.16
4 South_Asian 10.74
5 West_European 7.4
6 East_European 2.71
7 East_African 0.49
8 Northeast_Asian 0.45
9 Palaeo_African 0.22
10 Northwest_African 0.14
11 Neo_African 0.14

Dat fucking high South Asian tho lmao

Unfortunately, I had to restrict the population comparisons quite a bit as the S_Asian causes issues with getting the model to work well. I restricted populations to those that were MENA on my list and had a S_Asian score of greater than 2 to get the placements decent. The Dagestan population might be wrong as well (it's from a population from Dagestan I believe-I put it in by hand).

https://s5.postimg.org/vlg2m690n/Pahli.png

MysteriousWays
08-24-2017, 11:14 PM
Thanks

Population
East_European 12.14
West_European 24.47
Mediterranean 37.23
Neo_African -
West_Asian 18.97
South_Asian -
Northeast_Asian -
Southeast_Asian -
East_African -
Southwest_Asian 6.68
Northwest_African 0.51
Palaeo_African

Similar to Freeroostah, you have pretty good placement in my opinion despite a lack of SE European referneces.

https://s5.postimg.org/9njlsdu07/Kelmendasi.png

Pahli
08-24-2017, 11:16 PM
...

Once again, thanks! Btw. this calculator is a bit shitty IMO, it gives me a lot more South Asian than many other calculators, but the plot is quite good actually.

alnortedelsur
08-24-2017, 11:17 PM
Do mine, please...

With my 23Andme DNA kit:

East_European 7.96
West_European 31.17
Mediterranean 29.62
Neo_African 3.08
West_Asian 10.33
South_Asian -
Northeast_Asian 2.65
Southeast_Asian 2.49
East_African 0.98
Southwest_Asian 4.88
Northwest_African 4.81
Palaeo_African 2.05

With my Ancestry DNA kit:

East_European 7.37
West_European 30.43
Mediterranean 30.65
Neo_African 3.01
West_Asian 10.81
South_Asian -
Northeast_Asian 3.26
Southeast_Asian 2.27
East_African 1.36
Southwest_Asian 4.73
Northwest_African 4.22
Palaeo_African 1.89

Thanks in advance.

MysteriousWays
08-24-2017, 11:22 PM
I have 3


# Population Percent
1 West_European 33.32
2 Mediterranean 25.43
3 East_European 19.66
4 West_Asian 14.26
5 Southwest_Asian 5.16
6 Northeast_Asian 1.32
7 East_African 0.53
8 Southeast_Asian 0.32


# Population Percent
1 West_European 33.04
2 Mediterranean 27.99
3 East_European 18.58
4 West_Asian 13.3
5 Southwest_Asian 4.43
6 Northeast_Asian 2.05
7 Southeast_Asian 0.26
8 South_Asian 0.18
9 East_African 0.17

# Population Percent
1 West_European 33.73
2 Mediterranean 26.53
3 East_European 21.77
4 West_Asian 13.89
5 Southwest_Asian 3.71
6 Southeast_Asian 0.27
7 East_African 0.09

Sorry for the delay.Here you are.

https://s5.postimg.org/dl6vhsgtj/wulf.png

MysteriousWays
08-24-2017, 11:29 PM
Do mine, please...

With my 23Andme DNA kit:

East_European 7.96
West_European 31.17
Mediterranean 29.62
Neo_African 3.08
West_Asian 10.33
South_Asian -
Northeast_Asian 2.65
Southeast_Asian 2.49
East_African 0.98
Southwest_Asian 4.88
Northwest_African 4.81
Palaeo_African 2.05

With my Ancestry DNA kit:

East_European 7.37
West_European 30.43
Mediterranean 30.65
Neo_African 3.01
West_Asian 10.81
South_Asian -
Northeast_Asian 3.26
Southeast_Asian 2.27
East_African 1.36
Southwest_Asian 4.73
Northwest_African 4.22
Palaeo_African 1.89

Thanks in advance.

Here you are.
https://s5.postimg.org/66hjpeuxz/alnorte.png

Ibericus
08-24-2017, 11:29 PM
Me :

East_European 4.11
West_European 38.19
Mediterranean 47.53
Neo_African 0.22
West_Asian 2.22
South_Asian 0.53
Northeast_Asian -
Southeast_Asian 0.38
East_African 0.65
Southwest_Asian 4.46
Northwest_African 1.71
Palaeo_African -

Alessio
08-24-2017, 11:30 PM
Grazie mille in advance!

Here's mine:

Population
East_European 6.38
West_European 37.76
Mediterranean 31.96
West_Asian 17.61
South_Asian 0.11
Northeast_Asian 0.18
East_African 0.26
Southwest_Asian 5.76

Mom (North_Dutch1)

Population
East_European 12.77
West_European 56.18
Mediterranean 22.71
West_Asian 7.12
South_Asian 1.2

Grandfather (North_Dutch2)

Population
East_European 13.06
West_European 54.60
Mediterranean 25.24
West_Asian 6.74
Northeast_Asian 0.28
Southeast_Asian 0.08

Naples_1

Population
East_European 2.67
West_European 19.54
Mediterranean 37.04
West_Asian 24.33
South_Asian 0.88
East_African 1.54
Southwest_Asian 10.78
Northwest_African 3.21

Naples_2

Population
East_European 4.12
West_European 20.37
Mediterranean 34.95
West_Asian 24.96
Southwest_Asian 10.72
Northwest_African 4.89

firemonkey
08-24-2017, 11:34 PM
Thanks

1 West_European 54.14
2 Mediterranean 24.57
3 East_European 12.3
4 West_Asian 6.34
5 South_Asian 1.17
6 Northwest_African 0.75
7 East_African 0.36
8 Northeast_Asian 0.21
9 Palaeo_African 0.09
10 Southeast_Asian 0.07

Peterski
08-24-2017, 11:35 PM
Please add me and two more people:

VDMantas:

Population
East_European 67.60
West_European 24.71
Mediterranean 7.69

Stankevicius:

Population
East_European 66.25
West_European 30.79
Mediterranean 2.96

Me (FTDNA):

Population
East_European 28.79
West_European 42.87
Mediterranean 18.88
Neo_African -
West_Asian 8.71
South_Asian 0.41
Northeast_Asian -
Southeast_Asian -
East_African -
Southwest_Asian 0.29

MysteriousWays
08-24-2017, 11:35 PM
Me :

East_European 4.11
West_European 38.19
Mediterranean 47.53
Neo_African 0.22
West_Asian 2.22
South_Asian 0.53
Northeast_Asian -
Southeast_Asian 0.38
East_African 0.65
Southwest_Asian 4.46
Northwest_African 1.71
Palaeo_African -

Between Portuguese and N_Italian for this one. Model fit is quite strong, so I'm confident this is where the model plots you.

https://s5.postimg.org/ghtwi2mnb/ibericus.png

MysteriousWays
08-24-2017, 11:40 PM
Grazie mille in advance!

Here's mine:

Population
East_European 6.38
West_European 37.76
Mediterranean 31.96
West_Asian 17.61
South_Asian 0.11
Northeast_Asian 0.18
East_African 0.26
Southwest_Asian 5.76

Mom (North_Dutch1)

Population
East_European 12.77
West_European 56.18
Mediterranean 22.71
West_Asian 7.12
South_Asian 1.2

Grandfather (North_Dutch2)

Population
East_European 13.06
West_European 54.60
Mediterranean 25.24
West_Asian 6.74
Northeast_Asian 0.28
Southeast_Asian 0.08

Naples_1

Population
East_European 2.67
West_European 19.54
Mediterranean 37.04
West_Asian 24.33
South_Asian 0.88
East_African 1.54
Southwest_Asian 10.78
Northwest_African 3.21

Naples_2

Population
East_European 4.12
West_European 20.37
Mediterranean 34.95
West_Asian 24.96
Southwest_Asian 10.72
Northwest_African 4.89

Your mother and grandfather are in almost identical positions. Your father is right next to Sicily; you plot right in between.

https://s5.postimg.org/nz33xac6f/Alessio.png

MysteriousWays
08-24-2017, 11:47 PM
Thanks

1 West_European 54.14
2 Mediterranean 24.57
3 East_European 12.3
4 West_Asian 6.34
5 South_Asian 1.17
6 Northwest_African 0.75
7 East_African 0.36
8 Northeast_Asian 0.21
9 Palaeo_African 0.09
10 Southeast_Asian 0.07

Again, you are near Dutch, which is about halfway between English and German.

https://s5.postimg.org/e320xn6ef/Graph.png

Alessio
08-24-2017, 11:48 PM
Your mother and grandfather are in almost identical positions. Your father is right next to Sicily; you plot right in between.

https://s5.postimg.org/nz33xac6f/Alessio.png

Thanks bro! No my father would be right of S _Italian (from S_Italian north east, (same distance as Sicilian to S_Italian) if I literaly take the distance from North_Dutch 1 to me and make a straight line (I used a measuring tool :p) The Naples_1 sample is one of my matches at AncestryDNA that tested at GEDmatch for me who comes from the same part of Naples.

MysteriousWays
08-24-2017, 11:50 PM
Please add me and two more people:

VDMantas:

Population
East_European 67.60
West_European 24.71
Mediterranean 7.69

Stankevicius:

Population
East_European 66.25
West_European 30.79
Mediterranean 2.96

Me (FTDNA):

Population
East_European 28.79
West_European 42.87
Mediterranean 18.88
Neo_African -
West_Asian 8.71
South_Asian 0.41
Northeast_Asian -
Southeast_Asian -
East_African -
Southwest_Asian 0.29

You are placed near Hungary and Slovenia on this one, Litvin.

https://s5.postimg.org/axhf7fns7/Litvin.png

Alessio
08-24-2017, 11:52 PM
Again, you are near Dutch, which is about halfway between English and German.

https://s5.postimg.org/e320xn6ef/Graph.png

If you could do this sample for me I'd be grateful! She has similar ancestry as I have (Irish/Neapolitan) and is also related (same comune, related to maternal side of the family).

Population
East_European 6.19
West_European 39.78
Mediterranean 29.37
Neo_African 0.34
West_Asian 17.02
Southwest_Asian 5.87
Northwest_African 1.31
Palaeo_African 0.09

It'd be interesting to see where she plots compared to me.

alnortedelsur
08-24-2017, 11:53 PM
Here you are.
https://s5.postimg.org/66hjpeuxz/alnorte.png

Thanks bro, you're the man :thumb001:

This is incredible: I always cluster, in all PCAs, with or very close to Italians. Should I change the Spanish flag on my profile with an Italian flag? lol xD

Peterski
08-24-2017, 11:53 PM
Thanks MysteriousWays!

VDMantas is Lithuanian:

https://www.theapricity.com/forum/showthread.php?212589-Post-your-Dodecad-V3-quot-East-European-quot

MysteriousWays
08-24-2017, 11:59 PM
If you could do this sample for me I'd be grateful! She has similar ancestry as I have (Irish/Neapolitan) and is also related (same comune, related to maternal side of the family).

Population
East_European 6.19
West_European 39.78
Mediterranean 29.37
Neo_African 0.34
West_Asian 17.02
Southwest_Asian 5.87
Northwest_African 1.31
Palaeo_African 0.09

It'd be interesting to see where she plots compared to me.

Very close to you, as you would expect.

https://s5.postimg.org/qx02qzjtz/Alessio_2.png

Alessio
08-25-2017, 12:05 AM
Very close to you, as you would expect.

https://s5.postimg.org/qx02qzjtz/Alessio_2.png

The one on the left right?
Makes sense! Thanks!

MysteriousWays
08-25-2017, 12:08 AM
The one on the left right?
Makes sense! Thanks!

Relative is on the left, yes.

Coolguy1
08-25-2017, 12:40 AM
# Population Percent
1 Mediterranean 30.66
2 West_Asian 23.08
3 West_European 22.01
4 East_European 13.11
5 Southwest_Asian 8.13
6 Northwest_African 2.28
7 South_Asian 0.58
8 East_African 0.16

Thanks

Dibran
08-25-2017, 12:45 AM
Please post your results for Dodecad v3 here. I will be making a new PCA for all who are interested.

Thank you kindly!

Me:

23andme

Population
East_European 8.96
West_European 25.04
Mediterranean 38.16
Neo_African -
West_Asian 20.54
South_Asian -
Northeast_Asian 0.15
Southeast_Asian -
East_African -
Southwest_Asian 5.87
Northwest_African 1.28
Palaeo_African -

LivingDNA

Population
East_European 8.89
West_European 24.75
Mediterranean 37.15
Neo_African -
West_Asian 21.59
South_Asian -
Northeast_Asian -
Southeast_Asian -
East_African -
Southwest_Asian 5.16
Northwest_African 2.46
Palaeo_African -

My father

Population
East_European 10.29
West_European 24.22
Mediterranean 36.91
Neo_African -
West_Asian 20.60
South_Asian -
Northeast_Asian 0.33
Southeast_Asian 0.16
East_African -
Southwest_Asian 7.02
Northwest_African 0.45
Palaeo_African -

JQP4545
08-25-2017, 12:49 AM
Where do you find the PCA? I don't see it on GEDMatch.

MysteriousWays
08-25-2017, 02:49 AM
Where do you find the PCA? I don't see it on GEDMatch.

I don't find them. I create them.

alnortedelsur
08-25-2017, 02:52 AM
I don't find them. I create them.

How do you make it (and Ibericus, and others)?? Just curious.

MysteriousWays
08-25-2017, 02:56 AM
Thank you kindly!

Me:

23andme

Population
East_European 8.96
West_European 25.04
Mediterranean 38.16
Neo_African -
West_Asian 20.54
South_Asian -
Northeast_Asian 0.15
Southeast_Asian -
East_African -
Southwest_Asian 5.87
Northwest_African 1.28
Palaeo_African -

LivingDNA

Population
East_European 8.89
West_European 24.75
Mediterranean 37.15
Neo_African -
West_Asian 21.59
South_Asian -
Northeast_Asian -
Southeast_Asian -
East_African -
Southwest_Asian 5.16
Northwest_African 2.46
Palaeo_African -

My father

Population
East_European 10.29
West_European 24.22
Mediterranean 36.91
Neo_African -
West_Asian 20.60
South_Asian -
Northeast_Asian 0.33
Southeast_Asian 0.16
East_African -
Southwest_Asian 7.02
Northwest_African 0.45
Palaeo_African -

This does not have references for Albanians, but I think the placement should be decent. Your father's is more towards the upper right. You are slightly closer to Tuscans than to Greeks.

https://s5.postimg.org/auk7yqwx3/Dibran.png

MysteriousWays
08-25-2017, 02:57 AM
How do you make it (and Ibericus, and others)?? Just curious.

I have software that I use for work sometimes that can create them. It's a part of the functioning of the software package (among lots of other stuff).

Damiăo de Góis
08-25-2017, 02:59 AM
If you may:

Population
East_European 2.94
West_European 38.33
Mediterranean 42.86
Neo_African 1.07
West_Asian 5.73
South_Asian 0.76
Northeast_Asian -
Southeast_Asian -
East_African 0.94
Southwest_Asian -
Northwest_African 7.26
Palaeo_African 0.11

alnortedelsur
08-25-2017, 03:01 AM
I have software that I use for work sometimes that can create them. It's a part of the functioning of the software package (among lots of other stuff).

I figured out something like that :)

I'm sure it must be based in some X and Y coordinates equations.

MysteriousWays
08-25-2017, 03:02 AM
If you may:

Population
East_European 2.94
West_European 38.33
Mediterranean 42.86
Neo_African 1.07
West_Asian 5.73
South_Asian 0.76
Northeast_Asian -
Southeast_Asian -
East_African 0.94
Southwest_Asian -
Northwest_African 7.26
Palaeo_African 0.11

Basically what one would expect for someone from Portugal.

https://s5.postimg.org/6zgtw6drb/Endovelico.png

MysteriousWays
08-25-2017, 03:10 AM
I figured out something like that :)

I'm sure it must be based in some X and Y coordinates equations.

It's a bit more complicated than this, but ultimately, the software spits out coordinates, yes.

Yehiel
08-25-2017, 04:24 AM
East_European 16.65
West_European 45.65
Mediterranean 22.20
Neo_African 0.31
West_Asian 10.40
South_Asian -
Northeast_Asian 0.14
Southeast_Asian -
East_African 0.08
Southwest_Asian 3.08
Northwest_African 1.42
Palaeo_African 0.08

thank you

Rius
08-25-2017, 04:34 AM
West_Asian 32.29
Mediterranean 26.18
Southwest_Asian 10.9
East_European 10.45
West_European 9.04
South_Asian 3.81
Southeast_Asian 3.28
Northeast_Asian 2.11
East_African 1.19
Palaeo_African 0.75

Thanks

magicalM
08-25-2017, 07:34 AM
Thanks again!
Population
East_European19.34
West_European
42.32
Mediterranean24.82
Neo_African-
West_Asian11.44
South_Asian0.58
Northeast_Asian0.26
Southeast_Asian0.43
East_African-
Southwest_Asian- Northwest_African0.70
Palaeo_African

Sent from my LG-H815 using Tapatalk

MysteriousWays
08-25-2017, 10:53 AM
East_European 16.65
West_European 45.65
Mediterranean 22.20
Neo_African 0.31
West_Asian 10.40
South_Asian -
Northeast_Asian 0.14
Southeast_Asian -
East_African 0.08
Southwest_Asian 3.08
Northwest_African 1.42
Palaeo_African 0.08

thank you

It places you just south of the "German" reference.

https://s5.postimg.org/n0e0mw10n/anoldposter.png

MysteriousWays
08-25-2017, 10:54 AM
Thanks again!
Population
East_European19.34
West_European
42.32
Mediterranean24.82
Neo_African-
West_Asian11.44
South_Asian0.58
Northeast_Asian0.26
Southeast_Asian0.43
East_African-
Southwest_Asian- Northwest_African0.70
Palaeo_African

Sent from my LG-H815 using Tapatalk

I think there may be an issue with the Slovenian and Hungarian references, as it has you closer to Slovenia than to Hungary. The placement also seems a bit off on the references.

https://s5.postimg.org/ogu4irtbb/Magical_M.png

MysteriousWays
08-25-2017, 10:56 AM
West_Asian 32.29
Mediterranean 26.18
Southwest_Asian 10.9
East_European 10.45
West_European 9.04
South_Asian 3.81
Southeast_Asian 3.28
Northeast_Asian 2.11
East_African 1.19
Palaeo_African 0.75

Thanks

This is not the best solution in the world as you lots of moderate strength components (that tends to weaken the models), but this is what I came up with that takes as many components as possible and has a somewhat acceptable placement.

https://s5.postimg.org/4aqmjvxnr/Rius.png

Grace O'Malley
08-25-2017, 11:18 AM
Could you please do mine when you have the time. Much appreciated.

Population
East_European 12.84
West_European 55.75
Mediterranean 22.70
Neo_African -
West_Asian 7.79
South_Asian 0.15
Northeast_Asian 0.33
Southeast_Asian -
East_African -
Southwest_Asian 0.44
Northwest_African -
Palaeo_African -

MysteriousWays
08-25-2017, 11:32 AM
Could you please do mine when you have the time. Much appreciated.

Population
East_European 12.84
West_European 55.75
Mediterranean 22.70
Neo_African -
West_Asian 7.79
South_Asian 0.15
Northeast_Asian 0.33
Southeast_Asian -
East_African -
Southwest_Asian 0.44
Northwest_African -
Palaeo_African -

Yes, here you are. Placed near the generic Northern European sample.

https://s5.postimg.org/il06vde07/G_OMalley.png

magicalM
08-25-2017, 11:49 AM
Thanks! The other plots done show that I am closer to Slovenes and Hungarians second like this one. On dedocad K7b I come out as Hungarian. Still interesting results the other results I got because history says that I am a mixture of German-Hungarian and Balkan - Hungarian. Hungarians are quite diverse, a result of having a larger territory back in history.

I think there may be an issue with the Slovenian and Hungarian references, as it has you closer to Slovenia than to Hungary. The placement also seems a bit off on the references.

https://s5.postimg.org/ogu4irtbb/Magical_M.png


Sent from my LG-H815 using Tapatalk

firemonkey
08-25-2017, 11:53 AM
Again, you are near Dutch, which is about halfway between English and German.

https://s5.postimg.org/e320xn6ef/Graph.png

It is difficult to read but I seem to be near CEU/North European?(hard to read) and quite far from Dutch.

MysteriousWays
08-25-2017, 11:54 AM
It is difficult to read but I seem to be near CEU/North European?(hard to read) and quite far from Dutch.

Yes, it places you further from the UK in general compared with the previous one, which you already thought was quite far. The model fit for this is quite good so I am pretty confident in the results here. Yes, you are near the CEU and North European markers.

firemonkey
08-25-2017, 12:09 PM
Yes, it places you further from the UK in general compared with the previous one, which you already thought was quite far. The model fit for this is quite good so I am pretty confident in the results here. Yes, you are near the CEU and North European markers.

CEU and North European seems quite vague as categories. What countries would be covered by them?

MysteriousWays
08-25-2017, 12:10 PM
CEU and North European seems quite vague as categories. What countries would be covered by them?

Not sure offhand. I'll try to find out.

Peterski
08-25-2017, 11:10 PM
This PCA explains my Oracle results:

https://www.theapricity.com/forum/showthread.php?218955-PCA-for-Dodecad-V3&p=4596226&viewfull=1#post4596226

http://i.imgur.com/FqiDvgX.png

http://i.imgur.com/FqiDvgX.png

^^^ Here is my Dodecad V3 Oracle:

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 60.5% Mixed_Slav (Dodecad) + 39.5% Mixed_Germanic (Dodecad) @ 2.09

By the way, Polish reference in this calculator is way off.

In other calculators I plot close to Poles, not Slovenians.

Peterski
08-25-2017, 11:20 PM
This PCA explains my Oracle results:

https://www.theapricity.com/forum/showthread.php?218955-PCA-for-Dodecad-V3&p=4596226&viewfull=1#post4596226

http://i.imgur.com/FqiDvgX.png

http://i.imgur.com/FqiDvgX.png

^^^ Here is my Dodecad V3 Oracle:

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 60.5% Mixed_Slav (Dodecad) + 39.5% Mixed_Germanic (Dodecad) @ 2.09

By the way, Polish reference in this calculator is way off.

In other calculators I plot close to Poles, not Slovenians.

And in Single Population Sharing, I get Slovenians:

Single Population Sharing:

# Population (source) Distance
1 Slovenian (Xing) 7.86
2 Hungarians (Behar) 8.24
3 German (Dodecad) 14.35
4 Polish (Dodecad) 16.85
5 Mixed_Slav (Dodecad) 17.26
6 FIN (1000Genomes) 17.95
7 N._European (Xing) 19.63
8 Argyll (1000 Genomes) 19.74
9 CEU (HapMap) 19.78
10 Balkans (Dodecad) 20.02

Nearly all Poles get Slovenians instead of Poles in this calculator. So Polish reference is either made-up or consists of ethnic Poles from Belarus, or some other North-Eastern Polish group.

TEUTORIGOS
08-26-2017, 01:22 AM
Thanks in advance fellow American MysteroiusWays :

East_European 9.92
West_European 55.26
Mediterranean 22.59
Neo_African 0.21
West_Asian 8.18
South_Asian 1.50
Northeast_Asian 1.00
Southeast_Asian -
East_African -
Southwest_Asian 0.35
Northwest_African 0.41
Palaeo_African 0.57

MysteriousWays
08-26-2017, 01:32 AM
Thanks in advance fellow American MysteroiusWays :

East_European 9.92
West_European 55.26
Mediterranean 22.59
Neo_African 0.21
West_Asian 8.18
South_Asian 1.50
Northeast_Asian 1.00
Southeast_Asian -
East_African -
Southwest_Asian 0.35
Northwest_African 0.41
Palaeo_African 0.57

Sorry, you are clustered with a bunch of things (generic Central European, Orcadian, Orkney), so it's a bit difficult to see your precise location.

https://s5.postimg.org/4d1rym3hj/Teutorigos.png

Dick
08-26-2017, 01:42 AM
And in Single Population Sharing, I get Slovenians:

Single Population Sharing:

# Population (source) Distance
1 Slovenian (Xing) 7.86
2 Hungarians (Behar) 8.24
3 German (Dodecad) 14.35
4 Polish (Dodecad) 16.85
5 Mixed_Slav (Dodecad) 17.26
6 FIN (1000Genomes) 17.95
7 N._European (Xing) 19.63
8 Argyll (1000 Genomes) 19.74
9 CEU (HapMap) 19.78
10 Balkans (Dodecad) 20.02

Nearly all Poles get Slovenians instead of Poles in this calculator. So Polish reference is either made-up or consists of ethnic Poles from Belarus, or some other North-Eastern Polish group.

Chill out Davidski Junior. Serbs and Croats also get Slovenians as first single pop(not sure about Bulgarians or McDonians) @ distance of 8-9, not much different than your distance. Means Slavs(or central/west/southwest Slavs?) are closer to each other on this calc than others imo.

MysteriousWays
08-26-2017, 01:49 AM
Chill out Davidski Junior. Serbs and Croats also get Slovenians as first single pop(not sure about Bulgarians or McDonians) @ distance of 8-9, not much different than your distance. Means Slavs(or central/west/southwest Slavs?) are closer to each other on this calc than others imo.

I think this calculator compresses most of central/west/southwest Slavs as well as perhaps Italians and SE Europeans

Dibran
08-26-2017, 04:54 AM
This does not have references for Albanians, but I think the placement should be decent. Your father's is more towards the upper right. You are slightly closer to Tuscans than to Greeks.

https://s5.postimg.org/auk7yqwx3/Dibran.png

Yea, roughyl where I presume an ALbanian average would be. Between Tuscan and Greek

TEUTORIGOS
08-26-2017, 05:03 AM
Sorry, you are clustered with a bunch of things (generic Central European, Orcadian, Orkney), so it's a bit difficult to see your precise location.

https://s5.postimg.org/4d1rym3hj/Teutorigos.png

Hmmm, that is the second chart now, the other being k15 EUTEST v2, that places next to the north Dutch. Maybe, there is something to it then ? I'm 75% British isles, which is close to Dutch ,anyway, so maybe my ancestry from Alsace-Lorraine (Central European) pulls me more towards the Dutch ? Or is it that these calculators are just significantly flawed ?

firemonkey
08-26-2017, 07:08 AM
According to gedmatch

Single pop sharing

# Population (source) Distance
1 CEU (HapMap) 2.05
2 Argyll (1000 Genomes) 2.34
3 Orcadian (HGDP) 2.44
4 Orkney (1000 Genomes) 2.59
5 N._European (Xing) 3.18
6 German (Dodecad) 5.23
7 Mixed_Germanic (Dodecad) 9.03
8 Dutch (Dodecad) 9.85

Mixed mode

1 89.6% Orkney (1000 Genomes) + 10.4% Hungarians (Behar) @ 1.15
2 87.7% Orkney (1000 Genomes) + 12.3% Slovenian (Xing) @ 1.26
3 93.2% Orkney (1000 Genomes) + 6.8% Balkans (Dodecad) @ 1.28
4 93.7% CEU (HapMap) + 6.3% FIN (1000Genomes) @ 1.32
5 90.7% Orcadian (HGDP) + 9.3% Hungarians (Behar) @ 1.32
6 88.9% Orcadian (HGDP) + 11.1% Slovenian (Xing) @ 1.39
7 95.6% CEU (HapMap) + 4.4% Finnish (Dodecad) @ 1.42
8 93.8% Orkney (1000 Genomes) + 6.2% Romanians_14 (Behar) @ 1.47

TEUTORIGOS
08-26-2017, 10:51 AM
According to gedmatch

Single pop sharing

# Population (source) Distance
1 CEU (HapMap) 2.05
2 Argyll (1000 Genomes) 2.34
3 Orcadian (HGDP) 2.44
4 Orkney (1000 Genomes) 2.59
5 N._European (Xing) 3.18
6 German (Dodecad) 5.23
7 Mixed_Germanic (Dodecad) 9.03
8 Dutch (Dodecad) 9.85

Mixed mode

1 89.6% Orkney (1000 Genomes) + 10.4% Hungarians (Behar) @ 1.15
2 87.7% Orkney (1000 Genomes) + 12.3% Slovenian (Xing) @ 1.26
3 93.2% Orkney (1000 Genomes) + 6.8% Balkans (Dodecad) @ 1.28
4 93.7% CEU (HapMap) + 6.3% FIN (1000Genomes) @ 1.32
5 90.7% Orcadian (HGDP) + 9.3% Hungarians (Behar) @ 1.32
6 88.9% Orcadian (HGDP) + 11.1% Slovenian (Xing) @ 1.39
7 95.6% CEU (HapMap) + 4.4% Finnish (Dodecad) @ 1.42
8 93.8% Orkney (1000 Genomes) + 6.2% Romanians_14 (Behar) @ 1.47

Yeah, GEDmatch makes more sense than the PCA chart :


Single Population Sharing:

1 Argyll (1000 Genomes) 2.17
2 N._European (Xing) 2.42
3 Orkney (1000 Genomes) 2.92
4 Orcadian (HGDP) 3.09
5 CEU (HapMap) 3.72
6 Mixed_Germanic (Dodecad) 6.37
7 German (Dodecad) 7.2
8 Dutch (Dodecad) 7.68

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 96.5% Orkney (1000 Genomes) + 3.5% Kalash (HGDP) @ 1.77
2 98.5% Argyll (1000 Genomes) + 1.5% Siddi (Reich) @ 1.86
3 98.3% Argyll (1000 Genomes) + 1.7% Kalash (HGDP) @ 1.87
4 98.1% Argyll (1000 Genomes) + 1.9% Burusho (HGDP) @ 1.87
5 98.2% Argyll (1000 Genomes) + 1.8% Sindhi (HGDP) @ 1.87
6 98.7% Argyll (1000 Genomes) + 1.3% Madiga (Reich) @ 1.88
7 98.6% Argyll (1000 Genomes) + 1.4% Velama (Reich) @ 1.88
8 98.4% Argyll (1000 Genomes) + 1.6% Meghawal (Reich) @ 1.88

MysteriousWays
08-26-2017, 11:22 AM
Hmmm, that is the second chart now, the other being k15 EUTEST v2, that places next to the north Dutch. Maybe, there is something to it then ? I'm 75% British isles, which is close to Dutch ,anyway, so maybe my ancestry from Alsace-Lorraine (Central European) pulls me more towards the Dutch ? Or is it that these calculators are just significantly flawed ?

I posted the wrong map by mistake that's why. You appear as roughly equidistant among the first four groups mentioned in your oracle. I'll post a new one shortly

TEUTORIGOS
08-26-2017, 02:07 PM
I posted the wrong map by mistake that's why. You appear as roughly equidistant among the first four groups mentioned in your oracle. I'll post a new one shortly

Okay, thanks.