Does anyone have Ötzi's GEDmatch kit?

[Ajeje Brazorf]

If you have the kit please post it.

[gıulıoımpa]

I don't have it but i seem to recall from a paper that analyzed his genome the modern population he would have been closer too are Corsicans.

So i imagine Neolithic + northern shift

Inviato dal mio SM-G389F utilizzando Tapatalk

[gıulıoımpa]

This says something similar.

https://www.newscientist.com/article/dn21523-otzi-the-ice-mummys-secrets-found-in-dna/amp/


Inviato dal mio SM-G389F utilizzando Tapatalk

[Ajeje Brazorf]

I don't have it but i seem to recall from a paper that analyzed his genome the modern population he would have been closer too are Corsicans.

I do know, I was just looking for the kit but apparently no one uploaded it on GEDmatch.

[gıulıoımpa]

I do know, I was just looking for the kit but apparently no one uploaded it on GEDmatch.Yeah, pity, i would like to check it out too.

Inviato dal mio SM-G389F utilizzando Tapatalk

[Ajeje Brazorf]

Yeah, pity, i would like to check it out too.

I only found this on a spreadsheet:

Eurogenes K15
West_Med 47.53
Atlantic 25.54
East_Med 20.11
North_Sea 6.21
Red_Sea 0.6

[de Burgh II]

Not on gedmatch, but his raw autosomal dna:

http://www.y-str.org/2015/01/tyrolean-ancient-dna.html

Scholarly article:

New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing

https://www.nature.com/articles/ncomms1701

European Nucleotide Archive (ENA) profile:
https://www.ebi.ac.uk/ena/data/view/PRJEB2830

[Petalpusher]

I don't have it but i seem to recall from a paper that analyzed his genome the modern population he would have been closer too are Corsicans.

So i imagine Neolithic + northern shift

Inviato dal mio SM-G389F utilizzando Tapatalk

Rather Sardinians, Otzi is more like a mid neo but typical for a farmer/forager of the era.

http://oi67.tinypic.com/egtlch.jpg

[Ajeje Brazorf]

Rather Sardinians, Otzi is more like a mid neo but typical for a farmer/forager of the era.

Also plots really close to Remedello RISE486.

[Ajeje Brazorf]

Not on gedmatch, but his raw autosomal dna:
http://www.y-str.org/2015/01/tyrolean-ancient-dna.html
Scholarly article:
New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing
https://www.nature.com/articles/ncomms1701
European Nucleotide Archive (ENA) profile:
https://www.ebi.ac.uk/ena/data/view/PRJEB2830

Which part should I download to upload it on GEDmatch?

[Sndrr]

Dit you manage?


https://drive.google.com/drive/folders/0B49499_WVp2fQnFkUjlLWFUyelU

[dududud]

Bump

[vbnetkhio]

Bump

Ötzi GedMatch-# T882519
Tyrolean Iceman OTZI Tisenjoch Pass, Oetztal Alps T882519 M CT-M5825 - 5300 years

[dududud]

Ötzi GedMatch-# T882519
Tyrolean Iceman OTZI Tisenjoch Pass, Oetztal Alps T882519 M CT-M5825 - 5300 years

Thanks!!!

[dududud]

Ötzi GedMatch-# T882519
Tyrolean Iceman OTZI Tisenjoch Pass, Oetztal Alps T882519 M CT-M5825 - 5300 years

Do you have his autosomal?

[vbnetkhio]

Do you have his autosomal?

you mean this stuff?

Eurogenes EUtest V2 K15 Oracle results:
Kit T882519

Admix Results (sorted):

# Population Percent
1 West_Med 36.79
2 East_Med 22.5
3 Atlantic 18.63
4 Northeast_African 5.36
5 Southeast_Asian 5.28
6 Red_Sea 4.13
7 North_Sea 3.91
8 Oceanian 2.21
9 Siberian 1.21

Single Population Sharing:

# Population (source) Distance
1 Sardinian 14.58
2 West_Sicilian 22.3
3 Tuscan 22.34
4 North_Italian 22.83
5 Algerian_Jewish 23.53
6 Spanish_Andalucia 23.67
7 Moroccan 23.93
8 Mozabite_Berber 24.15
9 Italian_Jewish 24.31
10 South_Italian 24.71
11 East_Sicilian 24.84
12 Tunisian 24.91
13 Algerian 24.92
14 Spanish_Extremadura 25.24
15 Spanish_Murcia 25.49
16 Portuguese 25.68
17 Italian_Abruzzo 25.78
18 Greek 25.87
19 Spanish_Valencia 25.88
20 Central_Greek 25.94

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 74.7% Sardinian + 25.3% Egyptian @ 8.23
2 66.8% Sardinian + 33.2% Tunisian @ 8.85
3 69.6% Sardinian + 30.4% Tunisian_Jewish @ 8.97
4 69.9% Sardinian + 30.1% Libyan_Jewish @ 8.99
5 67% Sardinian + 33% Algerian @ 9.04
6 76.3% Sardinian + 23.7% Jordanian @ 9.06
7 76.8% Sardinian + 23.2% Bedouin @ 9.16
8 66.1% Sardinian + 33.9% Moroccan @ 9.19
9 76.8% Sardinian + 23.2% Palestinian @ 9.22
10 65.8% Sardinian + 34.2% Algerian_Jewish @ 9.25
11 84.5% Sardinian + 15.5% Ethiopian_Tigray @ 9.3
12 80.9% Sardinian + 19.1% Yemenite_Jewish @ 9.33
13 66.8% Sardinian + 33.2% Italian_Jewish @ 9.39
14 84.9% Sardinian + 15.1% Ethiopian_Amhara @ 9.42
15 66.8% Sardinian + 33.2% Mozabite_Berber @ 9.51
16 68.8% Sardinian + 31.2% Sephardic_Jewish @ 9.63
17 81.5% Sardinian + 18.5% Saudi @ 9.93
18 77.1% Sardinian + 22.9% Syrian @ 9.97
19 86.7% Sardinian + 13.3% Ethiopian_Oromo @ 10.02
20 77% Sardinian + 23% Samaritan @ 10.07

https://i.imgur.com/fkae9T5.png

https://i.imgur.com/JWzwegF.png

https://i.imgur.com/22FsaxB.png

[dududud]

you mean this stuff?

Eurogenes EUtest V2 K15 Oracle results:
Kit T882519

Admix Results (sorted):

# Population Percent
1 West_Med 36.79
2 East_Med 22.5
3 Atlantic 18.63
4 Northeast_African 5.36
5 Southeast_Asian 5.28
6 Red_Sea 4.13
7 North_Sea 3.91
8 Oceanian 2.21
9 Siberian 1.21

Single Population Sharing:

# Population (source) Distance
1 Sardinian 14.58
2 West_Sicilian 22.3
3 Tuscan 22.34
4 North_Italian 22.83
5 Algerian_Jewish 23.53
6 Spanish_Andalucia 23.67
7 Moroccan 23.93
8 Mozabite_Berber 24.15
9 Italian_Jewish 24.31
10 South_Italian 24.71
11 East_Sicilian 24.84
12 Tunisian 24.91
13 Algerian 24.92
14 Spanish_Extremadura 25.24
15 Spanish_Murcia 25.49
16 Portuguese 25.68
17 Italian_Abruzzo 25.78
18 Greek 25.87
19 Spanish_Valencia 25.88
20 Central_Greek 25.94

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 74.7% Sardinian + 25.3% Egyptian @ 8.23
2 66.8% Sardinian + 33.2% Tunisian @ 8.85
3 69.6% Sardinian + 30.4% Tunisian_Jewish @ 8.97
4 69.9% Sardinian + 30.1% Libyan_Jewish @ 8.99
5 67% Sardinian + 33% Algerian @ 9.04
6 76.3% Sardinian + 23.7% Jordanian @ 9.06
7 76.8% Sardinian + 23.2% Bedouin @ 9.16
8 66.1% Sardinian + 33.9% Moroccan @ 9.19
9 76.8% Sardinian + 23.2% Palestinian @ 9.22
10 65.8% Sardinian + 34.2% Algerian_Jewish @ 9.25
11 84.5% Sardinian + 15.5% Ethiopian_Tigray @ 9.3
12 80.9% Sardinian + 19.1% Yemenite_Jewish @ 9.33
13 66.8% Sardinian + 33.2% Italian_Jewish @ 9.39
14 84.9% Sardinian + 15.1% Ethiopian_Amhara @ 9.42
15 66.8% Sardinian + 33.2% Mozabite_Berber @ 9.51
16 68.8% Sardinian + 31.2% Sephardic_Jewish @ 9.63
17 81.5% Sardinian + 18.5% Saudi @ 9.93
18 77.1% Sardinian + 22.9% Syrian @ 9.97
19 86.7% Sardinian + 13.3% Ethiopian_Oromo @ 10.02
20 77% Sardinian + 23% Samaritan @ 10.07

https://i.imgur.com/fkae9T5.png

https://i.imgur.com/JWzwegF.png

https://i.imgur.com/22FsaxB.png

Because few SNP, i want to convert his raw data to a v3.

[vbnetkhio]

Because few SNP, i want to convert his raw data to a v3.

http://www.y-str.org/2015/01/tyrolean-ancient-dna.html

[dududud]

http://www.y-str.org/2015/01/tyrolean-ancient-dna.html

The autosomal file is too small to be hosted by gedmatch...

[vbnetkhio]

The autosomal file is too small to be hosted by gedmatch...

maybe the guy who uploaded him to gedmatch has access to some other Otzi sample.
and i doubt the quality would improve much by imputing.

if you ignore the obvious noise like siberian, from this sample you can see Otzi is like a Sardinian, but with more Levantine and less WHG.

[dududud]

maybe the guy who uploaded him to gedmatch has access to some other Otzi sample.
and i doubt the quality would improve much by imputing.

if you ignore the obvious noise like siberian, from this sample you can see Otzi is like a Sardinian, but with more Levantine and less WHG.

This is weird because some EEF has less Levant stuff than Otzi.

[vbnetkhio]

This is weird because some EEF has less Levant stuff than Otzi.

it's probably becuase of the low quality.
otzi is "famous" but we don't have a good autosomal sample of him. rather check the high quality "unknown" neolithic samples.

[dududud]

it's probably becuase of the low quality.
otzi is "famous" but we don't have a good autosomal sample of him. rather check the high quality "unknown" neolithic samples.

Thanks, it's true.

[Gallop]

Comparison of my kit with the Ötzi kit

https://1.bp.blogspot.com/-5wxfu1Veiek/Xbq_KzVSbEI/AAAAAAAABNs/6SzfvXDnlWUDTN45DkKHzrlqy4uwcGZNACEwYBhgL/s320/OTZIwhitmekitsmall.JPEG

Largest segment = 7.5 cM

Total Half-Match segments (HIR) = 7.5 cM (0.208 Pct)
Estimated number of generations to MRCA = 7.5

1 shared segments found for this comparison.

144753 SNPs used for this comparison.

42.470 Pct SNPs are full identical

Comparison took 14.833 seconds.
CPU time used: 0.035 cpu seconds.

Ver: Aug 17 2019 00:16:19