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View Full Version : Which one of my GEDmatch results is the most accurate?



Dukagjini
09-20-2018, 04:03 PM
In your opinion which GEDmatch result here do you think is the most accurate? (Montenegro Albanian)

DNA.LAND .vcf file to GEDmatch Genesis (123,000 SNPS)

Admix Results (sorted):

# Population Percent
1 North_Atlantic 25.29
2 East_Med 22.53
3 West_Med 20.43
4 Baltic 19.03
5 West_Asian 8.47
6 Red_Sea 3.3
7 East_Asian 0.95

Single Population Sharing:

# Population (source) Distance
1 Bulgarian 7.08
2 Greek_Thessaly 7.23
3 Romanian 7.54
4 Tuscan 9.01
5 North_Italian 10.12
6 Serbian 10.52
7 Italian_Abruzzo 12.01
8 West_Sicilian 12.55
9 Central_Greek 13.64
10 East_Sicilian 14.49
11 Ashkenazi 16.09
12 Portuguese 16.84
13 South_Italian 17.16
14 Moldavian 17.5
15 Spanish_Extremadura 17.64
16 Spanish_Galicia 17.77
17 Hungarian 18.19
18 Spanish_Murcia 18.59
19 Spanish_Cataluna 18.6
20 French 18.64

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 54.9% Romanian + 45.1% Tuscan @ 2.54
2 56.7% Bulgarian + 43.3% Tuscan @ 2.57
3 68.4% West_Sicilian + 31.6% South_Polish @ 2.63
4 54.6% Serbian + 45.4% West_Sicilian @ 2.64
5 78.3% Tuscan + 21.7% Ukrainian_Belgorod @ 2.69
6 78.2% Tuscan + 21.8% Southwest_Russian @ 2.71
7 71.2% West_Sicilian + 28.8% Polish @ 2.78
8 54.2% Tuscan + 45.8% Serbian @ 2.85
9 69.2% West_Sicilian + 30.8% Ukrainian @ 2.88
10 61.6% West_Sicilian + 38.4% Croatian @ 2.89
11 75.2% West_Sicilian + 24.8% Estonian @ 2.95
12 60.1% Bulgarian + 39.9% North_Italian @ 2.96
13 73.2% West_Sicilian + 26.8% Belorussian @ 3.02
14 80.8% Greek_Thessaly + 19.2% Southeast_English @ 3.03
15 80.9% Tuscan + 19.1% Erzya @ 3.03
16 59.6% West_Sicilian + 40.4% Hungarian @ 3.04
17 76.9% Greek_Thessaly + 23.1% South_Dutch @ 3.04
18 79.5% Tuscan + 20.5% Estonian_Polish @ 3.06
19 67% Tuscan + 33% Moldavian @ 3.06
20 50.7% East_German + 49.3% Algerian_Jewish @ 3.08


23andme v3 converted file (181,000 SNPS)

Admix Results (sorted):

# Population Percent
1 North_Atlantic 24.14
2 East_Med 23.24
3 West_Med 20.93
4 Baltic 18.73
5 West_Asian 9.59
6 Red_Sea 2.68
7 East_Asian 0.64
8 Oceanian 0.04

Single Population Sharing:

# Population (source) Distance
1 Greek_Thessaly 5.87
2 Bulgarian 6.82
3 Romanian 7.87
4 Tuscan 8.84
5 North_Italian 10.66
6 Italian_Abruzzo 11.06
7 Serbian 11.36
8 West_Sicilian 11.72
9 Central_Greek 12.34
10 East_Sicilian 13.36
11 Ashkenazi 15.14
12 South_Italian 15.98
13 Portuguese 17.91
14 Moldavian 18.09
15 Spanish_Extremadura 18.58
16 Spanish_Galicia 18.88
17 Hungarian 19.23
18 Spanish_Murcia 19.58
19 Spanish_Cataluna 19.64
20 Spanish_Valencia 19.76

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 56.8% Bulgarian + 43.2% Tuscan @ 1.78
2 50.8% Serbian + 49.2% West_Sicilian @ 2.66
3 71.2% West_Sicilian + 28.8% Ukrainian @ 2.67
4 64.1% West_Sicilian + 35.9% Croatian @ 2.69
5 70.7% West_Sicilian + 29.3% South_Polish @ 2.7
6 84.8% Greek_Thessaly + 15.2% Southeast_English @ 2.7
7 81.6% Greek_Thessaly + 18.4% South_Dutch @ 2.73
8 53.3% Romanian + 46.7% Tuscan @ 2.79
9 80.9% Greek_Thessaly + 19.1% West_German @ 2.81
10 85.6% Greek_Thessaly + 14.4% Southwest_English @ 2.81
11 60.8% Romanian + 39.2% West_Sicilian @ 2.81
12 85.8% Greek_Thessaly + 14.2% Orcadian @ 2.85
13 79.4% Greek_Thessaly + 20.6% French @ 2.87
14 73.3% West_Sicilian + 26.7% Polish @ 2.88
15 85.7% Greek_Thessaly + 14.3% North_Dutch @ 2.88
16 86.5% Greek_Thessaly + 13.5% Norwegian @ 2.89
17 80.1% Greek_Thessaly + 19.9% Austrian @ 2.92
18 85.7% Greek_Thessaly + 14.3% Danish @ 2.93
19 86.5% Greek_Thessaly + 13.5% West_Scottish @ 2.97
20 86.4% Greek_Thessaly + 13.6% Swedish @ 2.98

23andme v5 Genesis (58,000 SNPS)

Admix Results (sorted):

# Population Percent
1 East_Med 24.4
2 North_Atlantic 22.09
3 West_Med 21.56
4 Baltic 17.96
5 West_Asian 12.05
6 Red_Sea 1.56
7 Oceanian 0.35
8 Northeast_African 0.03

Single Population Sharing:

# Population (source) Distance
1 Greek_Thessaly 4.11
2 Bulgarian 7.38
3 Romanian 9.24
4 Tuscan 9.36
5 Italian_Abruzzo 9.63
6 Central_Greek 10.13
7 West_Sicilian 10.69
8 East_Sicilian 11.55
9 North_Italian 12.26
10 Serbian 13.32
11 Ashkenazi 13.8
12 South_Italian 14
13 Moldavian 19.51
14 Italian_Jewish 19.71
15 Algerian_Jewish 19.9
16 Sephardic_Jewish 20.09
17 Portuguese 20.13
18 Spanish_Extremadura 20.59
19 Spanish_Galicia 21.18
20 Hungarian 21.36

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 60.1% Bulgarian + 39.9% West_Sicilian @ 2.7
2 91.8% Greek_Thessaly + 8.2% Southeast_English @ 3.02
3 89.6% Greek_Thessaly + 10.4% West_German @ 3.03
4 90.2% Greek_Thessaly + 9.8% South_Dutch @ 3.04
5 92.3% Greek_Thessaly + 7.7% Southwest_English @ 3.05
6 89.2% Greek_Thessaly + 10.8% Austrian @ 3.05
7 92.4% Greek_Thessaly + 7.6% Orcadian @ 3.07
8 92.4% Greek_Thessaly + 7.6% North_Dutch @ 3.08
9 92.8% Greek_Thessaly + 7.2% Norwegian @ 3.09
10 90.2% Greek_Thessaly + 9.8% East_German @ 3.09
11 92.7% Greek_Thessaly + 7.3% Irish @ 3.1
12 92.4% Greek_Thessaly + 7.6% Danish @ 3.1
13 92.8% Greek_Thessaly + 7.2% West_Scottish @ 3.11
14 92% Greek_Thessaly + 8% North_German @ 3.13
15 92.8% Greek_Thessaly + 7.2% Swedish @ 3.13
16 67.1% Bulgarian + 32.9% South_Italian @ 3.14
17 61.1% Romanian + 38.9% South_Italian @ 3.15
18 89.4% Greek_Thessaly + 10.6% French @ 3.15
19 90.8% Greek_Thessaly + 9.2% Southwest_French @ 3.21
20 77.1% Greek_Thessaly + 22.9% Romanian @ 3.21

Gründig
09-20-2018, 04:11 PM
The converted V3 has worked great for me and I believe it's more accurate (at least in my case).

It stayed completely in line with my V5 but it rearranged some populations in a more realistic way and made my distances closer.

Dukagjini
09-20-2018, 04:14 PM
The converted V3 has worked great for me and I believe it's more accurate (at least in my case).

Same i think the best one for me is the converted v3 or .vcf from dna.land, im not sure between these two but they give me a lot more snps.

the dna.land .vcf was taken from the v5 upload on dna.land.

Dukagjini
01-24-2019, 11:31 PM
bump

Coolguy1
01-25-2019, 03:00 AM
Can you post your harappaworld results?

Stefanos.tasidis
01-25-2019, 05:09 AM
gedmatch results are something i would one day love to understand fully...

Dukagjini
01-26-2019, 12:11 AM
Can you post your harappaworld results?

Admix Results (sorted):

# Population Percent
1 NE-Euro 30.4
2 Mediterranean 29.21
3 Caucasian 23.05
4 Baloch 8.58
5 SW-Asian 7.72
6 NE-Asian 0.64
7 Pygmy 0.15
8 American 0.1
9 W-African 0.09
10 San 0.04
11 Papuan 0.02

Single Population Sharing:

# Population (source) Distance
1 italian (hgdp) 8.51
2 tuscan (hapmap) 8.65
3 tuscan (hgdp) 8.66
4 romanian-a (behar) 8.72
5 tuscan (1000genomes) 8.9
6 bulgarian (yunusbayev) 9.73
7 ashkenazi (harappa) 16.03
8 spaniard (behar) 18.03
9 french (hgdp) 18.24
10 ashkenazy-jew (behar) 18.83
11 spaniard (1000genomes) 19.08
12 hungarian (behar) 19.62
13 slovenian (xing) 21.44
14 morocco-jew (behar) 24.85
15 sephardic-jew (behar) 25
16 utahn-white (1000genomes) 25.37
17 puerto-rican (1000genomes) 25.63
18 turk-aydin (hodoglugil) 25.7
19 n-european (xing) 25.73
20 utahn-white (hapmap) 26.62

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 72% french (hgdp) + 28% druze (hgdp) @ 1.44
2 65.6% french (hgdp) + 34.4% cypriot (behar) @ 1.59
3 69.9% french (hgdp) + 30.1% lebanese-druze (haber) @ 1.95
4 53.3% ashkenazi (harappa) + 46.7% french (hgdp) @ 1.96
5 69.9% french (hgdp) + 30.1% lebanese-christian (haber) @ 1.97
6 58.9% ashkenazy-jew (behar) + 41.1% british (1000genomes) @ 2.17
7 56.4% british (1000genomes) + 43.6% cypriot (behar) @ 2.22
8 57.5% ashkenazy-jew (behar) + 42.5% utahn-white (1000genomes) @ 2.23
9 62.8% ashkenazi (harappa) + 37.2% british (1000genomes) @ 2.31
10 50.8% french (hgdp) + 49.2% ashkenazy-jew (behar) @ 2.37
11 70.5% french (hgdp) + 29.5% georgia-jew (behar) @ 2.54
12 61.5% ashkenazi (harappa) + 38.5% utahn-white (1000genomes) @ 2.63
13 61.2% ashkenazy-jew (behar) + 38.8% orcadian (hgdp) @ 2.65
14 57.8% utahn-white (1000genomes) + 42.2% cypriot (behar) @ 2.65
15 65% ashkenazi (harappa) + 35% orcadian (hgdp) @ 2.68
16 50.4% sephardic-jew (behar) + 49.6% utahn-white (1000genomes) @ 2.78
17 68.5% french (hgdp) + 31.5% lebanese-muslim (haber) @ 2.82
18 71.1% french (hgdp) + 28.9% azerbaijan-jew (behar) @ 2.96
19 54.1% orcadian (hgdp) + 45.9% cypriot (behar) @ 3.01
20 50.7% sephardic-jew (behar) + 49.3% n-european (xing) @ 3.15

safinator
01-26-2019, 10:27 PM
I think they are almost similar, 1% difference is splitting hairs really