GEDmatch Admixture Proportions Utility (Beta)

[Transhumanist]

GEDmatch Admixture Proportions Utility (Beta) (http://ww2.gedmatch.com:8007/autosomal/ap_mix1.php)

GEDmatch (http://www.gedmatch.com/)

JOlson (the individual behind the GEDmatch utility) from DNA-Forums stated:

The GEDmatch AdMix utility uses the same reference data as DIYDodecad V2, but does not use the same software. They are both based on the FRAPPE's EM Algorithm, but the DIYDodecad V2 utility includes a Block Relaxation Algorithm to improve convergence, and the Beta GEDmatch utility does not. Hence the higher noise component in the Beta GEDmatch utility results.

From the site:

This utility uses the same dataset as DIYDodecad V2. Different software allows it to work on this web site.Results will be slightly different than those produced by DIYDodecad V2. Credit to Dienekes Pontikos for his excellent work.

My results, based on my 23andMe v3 file data:

0.9% East_European
1.5% West_European
21.2% Mediterranean
2.1% Neo_African
42.3% West_Asian
7.0% South_Asian
0.1% Northeast_Asian
1.2% Southeast_Asian
3.9% East_African
18.0% Southwest_Asian
1.3% Northwest_African
0.5% Palaeo_African

[Transhumanist]

The utility has now been "Removed" from GEDmatch. Must have taken it down a few moments after I ran my file.

[Transhumanist]

My Dodecad (v3 K=12) results, for comparison.

East_European 1.5
West_European 2.4
Mediterranean 25.6
Neo_African 0
West_Asian 44.4
South_Asian 5.8
Northeast_Asian 0
Southeast_Asian 0.1
East_African 0
Southwest_Asian 19.5
Northwest_African 0.6
Palaeo_African 0

[Scrapple]

It might have been putting a strain on their servers, running it over 1000 iterations seems a bit much. I did mine yesterday but forgot to save it. It was about the same as when I ran it myself.

But a least I got to run it on my matches there who where rude and didn't provide an email address.

[Barreldriver]

I hope they get it back up, just curious to see what comes out for myself. Figure you cannot have too many analysis in order to get the most well founded picture.

[Scrapple]

Turns out gedmatch didn't properly give Diekenes credit so took it down but the issue was resolved and it will be back up.

http://dodecad.blogspot.com/2011/09/no-affiliation-to-gedmatchcom.html

[Transhumanist]

GEDmatch: Admixture Proportions by Chromosome (http://ww2.gedmatch.com:8007/autosomal/ap_mix1.php)

http://www.gedmatch.com/

GEDmatch:
This utility uses the same dataset as DIYDodecad V2. Different software is being used to enable it to work on this web site.
Even though the reference population names are the same, the results produced by this utility will be slightly less accurate that those produced by DIYDodecad V2.
Credit to Dienekes Pontikos for his excellent work.

My results, below:

[Pallantides]

My GedMatch result
http://img220.imageshack.us/img220/4809/gedmatch.png

My Dodecad DiY results, for comparison.:
http://img703.imageshack.us/img703/4680/graphdiy.png
East_European 14.18%
West_European 67.46%
Mediterranean 12.94%
Neo_African 0.00%
West_Asian 4.21%
South_Asian 0.00%
Northeast_Asian 1.20%
Southeast_Asian 0.00%
East_African 0.00%
Southwest_Asian 0.00%
Northwest_African 0.00%
Palaeo_African 0.00%

[Barreldriver]

Got mine 23andMe V2:

http://i326.photobucket.com/albums/k438/ragnarok1227/gedmatchadmixtool.jpg

[Scrapple]

Me
http://i.imgur.com/mGOYe.jpg

[Humanophage]

http://i51.photobucket.com/albums/f389/Humanophage/Genetics/GEDChrom.jpg
http://i51.photobucket.com/albums/f389/Humanophage/Genetics/GEDChromIll.jpg

For comparison, Dodecad by chromosome analysis:
http://i51.photobucket.com/albums/f389/Humanophage/Genetics/ByChromo.gif

Genome-wide Dodecad:
http://i51.photobucket.com/albums/f389/Humanophage/Genetics/DodecadDIY.gif

[Pallantides]

My Admixture Proportions
http://img88.imageshack.us/img88/545/admixture.png

[Pallantides]

removed

[d3cimat3d]

http://i54.tinypic.com/1178l7a.png

[Transhumanist]

GEDmatch ADMIX values:

East_European 2.3%
West_European 2.9%
Mediterranean 24.3%
Neo_African -
West_Asian 44.6%
South_Asian 5.0%
Northeast_Asian 0.2%
Southeast_Asian 0.2%
East_African 0.3%
Southwest_Asian 19.1%
Northwest_African 0.8%
Palaeo_African 0.1%

Chromosome painting, attached.

[Pallantides]

http://img707.imageshack.us/img707/9579/chrompainting.png

[Wuotan]

All of a sudden I'm getting a message saying my kit number isn't found in the database on GEDmatch. Anyone else experiencing this issue?

[xor eax, eax]

I just uploaded my 23andme data and I too am getting a kit not found error.

[lI]

I just uploaded my 23andme data and I too am getting a kit not found error.
I had that too - it happens when I leave a "space" when copying and pasting my kit number.

[xor eax, eax]

I had that too - it happens when I leave a "space" when copying and pasting my kit number.
I just checked again to no avail. Maybe it's because my results are from the V2 chip.

[Wuotan]

My GedMatch result
http://img220.imageshack.us/img220/4809/gedmatch.png

My Dodecad DiY results, for comparison.:
http://img703.imageshack.us/img703/4680/graphdiy.png
East_European 14.18%
West_European 67.46%
Mediterranean 12.94%
Neo_African 0.00%
West_Asian 4.21%
South_Asian 0.00%
Northeast_Asian 1.20%
Southeast_Asian 0.00%
East_African 0.00%
Southwest_Asian 0.00%
Northwest_African 0.00%
Palaeo_African 0.00%

I think you have the highest Western European score I've seen for this particular admixture analysis. Is that avatar your picture?

[Pallantides]

I think you have the highest Western European score I've seen for this particular admixture analysis. Is that avatar your picture?

Yes that's me.

[Wuotan]

My GedMatch result
http://img220.imageshack.us/img220/4809/gedmatch.png

My Dodecad DiY results, for comparison.:
http://img703.imageshack.us/img703/4680/graphdiy.png
East_European 14.18%
West_European 67.46%
Mediterranean 12.94%
Neo_African 0.00%
West_Asian 4.21%
South_Asian 0.00%
Northeast_Asian 1.20%
Southeast_Asian 0.00%
East_African 0.00%
Southwest_Asian 0.00%
Northwest_African 0.00%
Palaeo_African 0.00%

I think you have the highest Western European score I've seen for this particular admixture analysis. Is that avatar your picture?

[Graham]

http://www.theapricity.com/forum/attachment.php?attachmentid=17136&stc=1&d=1320444500
http://www.theapricity.com/forum/attachment.php?attachmentid=17137&stc=1&d=1320444500
http://www.theapricity.com/forum/attachment.php?attachmentid=17138&stc=1&d=1320444500

[Pallantides]

Fuck, I have missplaced my ID, I can't find the password anywhere.
Is it possible to get a new one or do I have to reupload?

[Damião de Góis]

Fuck, I have missplaced my ID, I can't find the password anywhere.
Is it possible to get a new one or do I have to reupload?

That happened to me too, i lost my ID number some time ago. I just reuploaded and it worked, they gave me a new ID.

[Graham]

*censored* The number that was on your chrom painting Palla. Try that

[Pallantides]

It worked.

[xor eax, eax]

Apparently I didn't read the directions close enough; I uploaded the extracted 23andme txt file rather than the zip. Here are my results:

Population
East_European 14.1%
West_European 41.2%
Mediterranean 27.9%
Neo_African -
West_Asian 9.8%
South_Asian 1.6%
Northeast_Asian 0.5%
Southeast_Asian 0.2%
East_African 0.1%
Southwest_Asian 3.3%
Northwest_African 0.8%
Palaeo_African 0.4%

Could the accuracy of this test be affected by the 1000 pass limit? My DV3 results were quite a bit different:

14.10% East_European
41.55% West_European
28.47% Mediterranean
0.00% Neo_African
10.29% West_Asian
1.62% South_Asian
0.62% Northeast_Asian
0.05% Southeast_Asian
0.00% East_African
3.12% Southwest_Asian
0.13% Northwest_African
0.05% Palaeo_African

[Boudica]

Ugh utility match won't work for me, idk what to do.. I forgot my kit number info and I keep trying to upload my data using another email address but it tells me that my data is already in the system.. I don't see a forgot kit number link any where :/

[xor eax, eax]

Ugh utility match won't work for me, idk what to do.. I forgot my kit number info and I keep trying to upload my data using another email address but it tells me that my data is already in the system.. I don't see a forgot kit number link any where :/

You could always try emailing them. Unfortunately the site seems to be lacking some key features. :icon_neutral:

[zack]

Lots of people in here would not be europid by stormfront standards....good thing this is not stormfront!

[Pallantides]

Lots of people in here would not be europid by stormfront standards....good thing this is not stormfront!

Swedes have 2% Siberian admixture on average according to the latest from Dienekes:
Eurasia7 spreadsheet (https://docs.google.com/spreadsheet/ccc?key=0ArAJcY18g2GadExjVnpKbHFEeGVZOEZPOXBxWnA2W nc#gid=0)
http://i.imgur.com/YVmXr.jpg

How would that fly on Stormfront?:D

[zack]

Swedes have 2% Siberian admixture on average according to the latest from Dienekes:
Eurasia7 spreadsheet (https://docs.google.com/spreadsheet/ccc?key=0ArAJcY18g2GadExjVnpKbHFEeGVZOEZPOXBxWnA2W nc#gid=0)
http://i.imgur.com/YVmXr.jpg

How would that fly on Stormfront?:D

They would deny it,they literally deny the admixture studies. If you bring them up they accuse you of being a jew trying to peddle the "everyone is mixed!" myth.

Now if you said on a individual level "hey im 2% siberian" then they would call you a mongrel and ban you to the open forums... :D

[xor eax, eax]

Lots of people in here would not be europid by stormfront standards....good thing this is not stormfront!
Who exactly are you referring to? Does stormfront even have a thread for genotyping results?

I'd take these tests with a grain of salt; my DV3 results were somewhat believable, but GEDmatch showed quite a bit more African e.g. Palaeo_African 0.4% vs 0.05%, while my 23andme results showed no artifacts despite it supposedly being able to detect <1% African and Asian.

[zack]

Who exactly are you referring to? Does stormfront even have a thread for genotyping results?

I'd take these tests with a grain of salt; my DV3 results were somewhat believable, but GEDmatch showed quite a bit more African e.g. Palaeo_African 0.4% vs 0.05%, while my 23andme results showed no artifacts despite it supposedly being able to detect <1% African and Asian.

Im not aware that stormfront has any studies in threads aside from 23andme.

Im just going by what i've seen over there.

If you stated you have any admixture you would be banned to the open forums with other non-whites.

Stromfront has a "dont ask dont tell" policy,if you admit or talk about admixture then you identify with it and you are banned.

I was just making the observation that of the two admixture threads that i have seen on this site almost everyone seems to have some from of admixture of some type,and that these people would not be considered white/europid by some stormfront standards.

[Pallantides]

They would deny it,they literally deny the admixture studies. If you bring them up they accuse you of being a jew trying to peddle the "everyone is mixed!" myth.

Now if you said on a individual level "hey im 2% siberian" then they would call you a mongrel and ban you to the open forums... :D

I'm 2.70% Siberian according to the Eurasia7 calculator. :D:embarrassed