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View Full Version : Italian G25 refrences from modern pop averages groups.



gixajo
07-09-2020, 05:49 PM
Same i did with French samples here:

I post which components every average/mean reference is made of.

South Italy:

Option A


Sout_Italian:A,0.10736598,0.14725883,-0.00537531,-0.04065114,0.01536774,-0.01480103,-0.00041355,-0.00131084,0.00544821,0.02098400,0.00147906,0.0031 8490,-0.00570559,0.00030105,-0.00697726,-0.00277458,0.00198963,-0.00014346,0.00262584,-0.00482755,-0.00234661,0.00195073,0.00064253,0.00137365,0.0000 9691

Sout_Italian:A,=Italian_Apulia,+Italian_Basilicata ,+Italian_Campania,+Sicilian_Average

Option B



South_Italian:Mainland,0.10765055,0.14730115,-0.00740228,-0.04272373,0.01384175,-0.01458015,-0.00069750,-0.00217618,0.00395688,0.02090800,0.00024765,0.0030 1008,-0.00603383,-0.00056470,-0.00836273,-0.00287953,0.00428768,0.00024715,0.00346385,-0.00433768,-0.00310053,0.00091510,0.00123820,0.00246810,0.0000 4713
South_Italain:Sicilian,0.10168200,0.14606700,-0.00383415,-0.03832935,0.01861865,-0.01259680,-0.00129250,0.00030765,0.01046465,0.02180770,0.0053 5865,0.00349700,-0.00418735,0.00250000,-0.00409415,-0.00483950,-0.00236850,-0.00059115,0.00180165,-0.00500250,0.00039535,0.00175180,-0.00254700,-0.00060250,0.00031915


South_Italian:Mainland,=Italian_Basilicata,+Italia n_Campania,+Italian_Apulia,+Italian_Calabria,

South_Italian:Sicilian,=Sicilian_East,+Sicilian_We st,

Center Italy:


Central_Italian:A,0.11701408,0.14925148,0.00917310 ,-0.02814708,0.02221933,-0.01003865,0.00044550,-0.00159775,0.00642820,0.02364700,0.00002603,0.0045 2040,-0.00955638,-0.00467495,-0.00375115,0.00052440,0.00259400,0.00045623,0.0023 5623,-0.00327855,-0.00208228,0.00226180,-0.00011475,0.00257140,-0.00120693

Central_Italian:A,=Italian_Marche,+Italian_Lazio,+ Italian_Tuscany,+Italian_Umbria,


North Italy:

Option A


North_Italian:NWest_ItalianB,0.12088005,0.14803870 ,0.02668133,-0.01301690,0.03185970,-0.00463645,0.00173313,0.00075578,0.00955653,0.0267 6138,-0.00346693,0.00623440,-0.01254318,-0.00359883,-0.00175085,-0.00680175,-0.00355968,0.00073808,0.00363588,-0.00318288,-0.00152863,0.00101390,-0.00082878,0.00284960,0.00022458
North_Italian:NEast_ItalianA,0.12542900,0.14592190 ,0.03352107,-0.00264457,0.03564947,-0.00060257,0.00285707,0.00234943,0.00940747,0.0209 5333,-0.00253820,0.00509107,-0.01078937,-0.00234117,-0.00259897,-0.00018743,0.00269963,0.00150253,0.00365313,-0.00328243,-0.00198453,0.00203360,-0.00081240,0.00217507,-0.00182223
North_Italian:NWest_Italian_Aosta-Valley,0.1269696,0.1460839,0.0392582,0.0047481,0.0 36976,-0.0015478,0.0024088,0.0028038,0.0102262,0.0219594,-0.004766,0.0049306,-0.0147248,-0.010356,0.0074986,0.0062582,0.0051892,-0.000285,0.003375,-0.0005378,0.0029261,0.0019476,-0.0009181,0.0081396,-5.98e-05


North_Italian:NWest_ItalianB,=Italian_Bergamo,+Ita lian_Lombardy,+Italian_Liguria,+Italian_Piedmont,

North_Italian:NEast_ItalianA,=Italian_Veneto,+Ital ian_Trentino-Alto-Adige,+Italian_Northeast,

North_Italian:NWest_Italian_Aosta-Valley,=Italian_Aosta-Valley

Option B


North_Italian:NWest_ItalianA,0.12070933,0.14655777 ,0.02910123,-0.00726750,0.03182627,-0.00322107,0.00253410,0.00137310,0.00910150,0.0238 0610,-0.00491210,0.00471067,-0.01256423,-0.00458970,0.00161273,-0.00296987,-0.00011317,0.00007823,0.00310690,-0.00120490,0.00003520,0.00159713,0.00020753,0.0042 3140,-0.00031917
North_Italian:NEast_ItalianA,0.12542900,0.14592190 ,0.03352107,-0.00264457,0.03564947,-0.00060257,0.00285707,0.00234943,0.00940747,0.0209 5333,-0.00253820,0.00509107,-0.01078937,-0.00234117,-0.00259897,-0.00018743,0.00269963,0.00150253,0.00365313,-0.00328243,-0.00198453,0.00203360,-0.00081240,0.00217507,-0.00182223


North_Italian:NEast_ItalianA,=Italian_Veneto,+Ital ian_Trentino-Alto-Adige,+Italian_Northeast,

North_Italian:NWest_ItalianA=Italian_Aosta_Valley, +Italian_Piedmont,+Italian_Liguria,

Sardinian


Sardinian,0.1216872,0.1672855,0.0284897,-0.0506523,0.060151,-0.0221337,-0.0039523,0.0024964,0.0415743,0.077351,-5.9e-05,0.0166487,-0.0286645,-0.012974,-0.013572,-0.0030013,0.0114027,-0.0013475,0.0016798,-0.0129947,-0.0021212,-0.0011018,-0.010084,-0.021383,0.0003375

Sardinian,=Sardinian

Use only one group of samples from every option. Donīt use option A and B of the same zone(North, South etc...) in the same source.

So you may choose one option from each (A or B) not together.

Source example:

South Italy (option A or B)+Center Italy+North Italy option (A or B)+Sardinia

So you can do 4 different sources taking all the zones.

(I hate combinatory):picard1:

gixajo
07-09-2020, 05:52 PM
And here French ones: https://www.theapricity.com/forum/showthread.php?327254-Customized-G25-French-refrences-Model

Luso
07-09-2020, 05:56 PM
For southern and central I used sample B's:

Target: Josef_scaled
Distance: 4.3749% / 0.04374935
89.6 North_Italian
10.4 Sardinian

dududud
07-10-2020, 05:47 AM
Distance: 2.9239% / 0.02923916
95.0 North_Italian
5.0 Sardinian

0.03149306 North_Italian:NEast_ItalianA
0.03149306 North_Italian:NEast_ItalianA
0.03257211 North_Italian:NWest_ItalianA
0.03329352 North_Italian:NWest_ItalianB
0.03388470 North_Italian:NWest_Italian_Aosta-Valley
0.06052799 Central_Italian:A
0.07879304 South_Italain:Sicilian
0.08157832 Sout_Italian:A
0.08487381 South_Italian:Mainland
0.09656363 Sardinian


Mother:
Distance: 2.7177% / 0.02717683
72.0 North_Italian
28.0 Sardinian

0.03707427 North_Italian:NWest_ItalianB
0.04363445 North_Italian:NWest_ItalianA
0.04522853 North_Italian:NEast_ItalianA
0.04522853 North_Italian:NEast_ItalianA
0.05274046 Central_Italian:A
0.05455304 North_Italian:NWest_Italian_Aosta-Valley
0.06814279 South_Italain:Sicilian
0.06960058 Sout_Italian:A
0.07048352 Sardinian
0.07265254 South_Italian:Mainland

Eurafricanid
12-18-2022, 01:50 AM
I used the options with more samples:

Target: Jgab602_scaled
Distance: 1.1175% / 0.01117451
47.4 West_Niger-Congo
34.6 North_Italian
8.8 Sardinian
5.0 Central_Italian
2.8 South_Amerindian
1.4 South_Italain

Target: Jgab602_scaled
Distance: 1.1175% / 0.01117463
27.0 North_Italian:NWest_Italian_Aosta-Valley
24.8 West_Niger-Congo:Cameroon_Mbo:CAM-MBO-051
12.8 West_Niger-Congo:Yoruba:NA18489
8.8 Sardinian
7.8 North_Italian:NEast_ItalianA
5.4 West_Niger-Congo:Cameroon_Bafut:CMF-BAK-074
4.4 Central_Italian:A
2.8 West_Niger-Congo:Esan_Nigeria:HG03109
1.8 South_Italain:Sicilian
1.8 South_Amerindian:BRA_Moraes_5800BP:MOS001
1.0 South_Amerindian:Surui:HGDP00843
0.8 West_Niger-Congo:Mbuti:A_Mbuti-5.DG
0.8 West_Niger-Congo:Cameroon_Aghem:TK-KVWUM012


A bit more Amerindian or African (or both) than expected (0.2%)

Eurafricanid
12-18-2022, 01:55 AM
A mix between the French and Italian calculators:

Target: Jgab602_scaled
Distance: 0.8640% / 0.00864000
47.2 West_Niger-Congo
26.0 France_Sud-Ouest
22.6 Central_Italian
2.8 South_Amerindian
1.0 Sardinian
0.4 South_Italian

Eurafricanid
01-18-2023, 06:18 PM
Target: Jgab602EuroProxy_Scaled
Distance: 2.1004% / 0.02100440
76.8 North_Italian
15.6 Sardinian
7.6 South_Italain

Eurafricanid
01-19-2023, 02:00 AM
Better Proxy:

Target: Jgab602EuroProxy_Scaled
Distance: 1.8894% / 0.01889385
69.0 North_Italian
20.0 Sardinian
11.0 South_Italain