WEZ56 sample from Tollense study in calculators [new version]

[Lucas]

https://eurogenes.blogspot.com/2020/09/low-prevalence-of-lactase-persistence.html

Most interesting WEZ56 sample with so called BaltoSlavic drift [new upload from last paper]

K36

Components %
Amerindian 0,00
Arabian 0,00
Armenian 0,00
Basque 0,00
Central_African 0,00
Central_Euro 3,79
East_African 0,00
East_Asian 0,00
East_Balkan 4,23
East_Central_Asian 0,00
East_Central_Euro 31,58
East_Med 0,00
Eastern_Euro 11,24
Fennoscandian 13,92
French 0,92
Iberian 0,00
Indo-Chinese 0,00
Italian 4,77
Malayan 0,00
Near_Eastern 0,00
North_African 0,00
North_Atlantic 8,45
North_Caucasian 0,79
North_Sea 20,31
Northeast_African 0,00
Oceanian 0,00
Omotic 0,00
Pygmy 0,00
Siberian 0,00
South_Asian 0,00
South_Central_Asian 0,00
South_Chinese 0,00
Volga-Ural 0,00
West_African 0,00
West_Caucasian 0,00
West_Med 0,00

https://i.imgur.com/hlKuwr5.png

ADC: 1x
56.6 PL_Suwalki
41.0 PL_Kuyavia_&_SE_Pomerania
2.4 Neumark

ADC: 0.5x
38.2 PL_Suwalki
26.4 Latvia_north-eastern
24.0 Neumark
11.4 NL_Friesland

ADC: 0.25x
64.0 Latvia_north-eastern
36.0 NL_Friesland

63.2 Latvia_north-eastern
36.8 NL_Friesland



K15

Components %
North_Sea 27,42
Atlantic 22,79
Baltic 32,98
Eastern_Euro 12,79
West_Med 2,07
West_Asian 1,15
East_Med 0,00
Red_Sea 0,00
South_Asian 0,80
Southeast_Asian 0,00
Siberian 0,00
Amerindian 0,00
Oceanian 0,00
Northeast_African 0,00
Sub-Saharan 0,00




Mixed Mode:
1 68,36% Lithuanian + 31,64% Irish @ 7,409
2 69,14% Lithuanian + 30,86% West_Scottish @ 7,609
3 67,58% Lithuanian + 32,42% North_Dutch @ 7,727
4 66,80% Lithuanian + 33,20% Danish @ 7,803
5 71,48% Lithuanian + 28,52% Orcadian @ 7,818
6 69,92% Lithuanian + 30,08% Southeast_English @ 8,037
7 63,67% Latvian + 36,33% Irish @ 8,053
8 69,92% Lithuanian + 30,08% England @ 8,070
9 65,23% Lithuanian + 34,77% North_German @ 8,109
10 65,23% Lithuanian + 34,77% Swedish @ 8,118

Least-squares method.

Using 1 populations approximation
1 100% Estonian @ 10,954
2 100% Polish @ 11,984
3 100% Belorussian @ 13,127
4 100% South_Polish @ 13,144
5 100% Lithuanian @ 13,631
6 100% Russian_Smolensk @ 14,068
7 100% Southwest_Finnish @ 14,292
8 100% Ukrainian_Lviv @ 14,483
9 100% Estonian_Polish @ 14,633
10 100% Ukrainian @ 14,651

Using 2 populations approximation
1 50% Latvian + 50% North_German @ 9,187
2 50% Lithuanian + 50% North_German @ 9,401
3 50% Lithuanian + 50% Swedish @ 9,441
4 50% Lithuanian + 50% Aland_Sweden @ 9,467
5 50% Latvian + 50% Irish @ 9,572
6 50% Latvian + 50% North_Dutch @ 9,602
7 50% Lithuanian + 50% Danish @ 9,624
8 50% Latvian + 50% Danish @ 9,737
9 50% Lithuanian + 50% North_Dutch @ 9,750
10 50% Latvian + 50% Swedish @ 9,790

Using 3 populations approximation
1 33% Lithuanian + 33% Lithuanian + 33% Irish @ 7,438
2 33% Lithuanian + 33% Lithuanian + 33% West_Scottish @ 7,672
3 33% Lithuanian + 33% Lithuanian + 33% North_Dutch @ 7,730
4 33% Lithuanian + 33% Lithuanian + 33% Danish @ 7,803
5 33% Lithuanian + 33% Lithuanian + 33% Orcadian @ 8,035
6 33% Lithuanian + 33% Lithuanian + 33% North_German @ 8,123
7 33% Lithuanian + 33% Lithuanian + 33% Swedish @ 8,130
8 33% Lithuanian + 33% Lithuanian + 33% Southeast_English @ 8,130
9 33% Lithuanian + 33% Lithuanian + 33% England @ 8,156
10 33% Latvian + 33% Latvian + 33% Irish @ 8,157

Using 4 populations approximation
1 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% Irish @ 7,779
2 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% West_Scottish @ 7,890
3 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% Orcadian @ 7,943
4 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% North_Dutch @ 8,166
5 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% Southeast_English @ 8,244
6 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% Danish @ 8,280
7 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% England @ 8,282
8 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% Scotland @ 8,380
9 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% West_Norwegian @ 8,398
10 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% Dutch @ 8,479


nMonte Calculator by www.dnagenics.com
v1.1 04/02/2020

Finished reading population data. 277 populations found.
15 components mode.

--------------------------------
Distance: 8,60

69,20% Lithuanian
28,80% Irish
01,80% Danish
00,20% Estonian

[Lucas]

Genome for test:) https://drive.google.com/file/d/1DGSFyFSpFZOsMcX-ptyAkLYntOVyhh2U/view?usp=sharing

[Lucas]

And full paper accidentally found in PDF:) https://drive.google.com/file/d/1rvi8pZJJabzFdysdR2Oo3kx4Rf8o59yV/view?usp=sharing

[Leto]

Do you have any other calculators?

[Lucas]

Do you have any other calculators?

You can download and check by yourself in AdmixtureStudio but ok K12b.

Components %
Gedrosia 8,34
Siberian 0,00
Northwest_African 0,00
Southeast_Asian 0,00
Atlantic_Med 25,25
North_European 60,30
South_Asian 0,00
East_African 0,71
Southwest_Asian 0,00
East_Asian 0,00
Caucasus 4,20
Sub_Saharan 1,20


---------

k13

Components %
North_Atlantic 36,25
Baltic 47,93
West_Med 7,60
West_Asian 6,32
East_Med 0,00
Red_Sea 0,00
South_Asian 1,80
East_Asian 0,00
Siberian 0,00
Amerindian 0,00
Oceanian 0,11
Northeast_African 0,00
Sub-Saharan 0,00




Mixed Mode:
1 72,27% Lithuanian + 27,73% Norwegian @ 3,343
2 62,89% Latvian + 37,11% Norwegian @ 3,520
3 75,39% Lithuanian + 24,61% Irish @ 3,588
4 73,83% Lithuanian + 26,17% North-Dutch @ 3,610
5 66,80% Latvian + 33,20% Irish @ 3,611
6 67,58% Latvian + 32,42% Scottish @ 3,625
7 76,17% Lithuanian + 23,83% Scottish @ 3,626
8 76,17% Lithuanian + 23,83% West_Scottish @ 3,675
9 64,45% Latvian + 35,55% North-Dutch @ 3,678
10 67,58% Latvian + 32,42% West_Scottish @ 3,799

Least-squares method.

Using 1 populations approximation
1 100% Estonian @ 7,013
2 100% Polish @ 8,122
3 100% Southwest_Finnish @ 8,594
4 100% Finnish @ 8,836
5 100% Belorussian @ 9,219
6 100% Russian_Smolensk @ 9,274
7 100% Cossacks_Kuban @ 9,685
8 100% Lithuanian @ 10,028
9 100% Estonian_Polish @ 10,104
10 100% South_Polish @ 10,903

Using 2 populations approximation
1 50% Latvian + 50% North-Swedish @ 4,883
2 50% Lithuanian + 50% North-Swedish @ 5,069
3 50% Latvian + 50% Swedish @ 5,319
4 50% Southwest_Finnish + 50% Lithuanian @ 5,598
5 50% Southwest_Finnish + 50% Russian_Smolensk @ 5,998
6 50% Latvian + 50% Norwegian @ 6,117
7 50% Latvian + 50% North_German @ 6,132
8 50% Latvian + 50% Danish @ 6,173
9 50% Estonian + 50% Polish @ 6,194
10 50% Lithuanian + 50% German_east @ 6,209

Using 3 populations approximation
1 33% Latvian + 33% Latvian + 33% Irish @ 3,612
2 33% Latvian + 33% Latvian + 33% Scottish @ 3,660
3 33% Latvian + 33% Latvian + 33% North-Dutch @ 3,768
4 33% Latvian + 33% Latvian + 33% Norwegian @ 3,810
5 33% Lithuanian + 33% Lithuanian + 33% Norwegian @ 3,813
6 33% Latvian + 33% Latvian + 33% West_Scottish @ 3,829
7 33% Lithuanian + 33% Lithuanian + 33% Swedish @ 3,915
8 33% Latvian + 33% Latvian + 33% Orcadian @ 4,159
9 33% Latvian + 33% Latvian + 33% Welsh @ 4,243
10 33% Latvian + 33% Latvian + 33% English @ 4,275

Using 4 populations approximation
1 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% Norwegian @ 3,485
2 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% Irish @ 3,595
3 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% North-Dutch @ 3,639
4 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% Scottish @ 3,667
5 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% West_Scottish @ 3,711
6 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% Orcadian @ 3,983
7 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% Welsh @ 4,106
8 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% English @ 4,184
9 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% Swedish @ 4,189
10 25% Lithuanian + 25% Lithuanian + 25% Lithuanian + 25% North_German @ 4,201



Distance: 4,82

62,20% Lithuanian
24,40% Norwegian
12,60% Estonian
00,80% North-Swedish

[Lucas]

Harappa

Components %
S-Indian 0,48
Baloch 7,35
Caucasian 4,83
NE-Euro 63,20
SE-Asian 0,00
Siberian 0,00
NE-Asian 0,00
Papuan 0,00
American 0,38
Beringian 0,00
Mediterranean 22,92
SW-Asian 0,00
San 0,42
E-African 0,00
Pygmy 0,00
W-African 0,42


Distance: 3,40

53,60% lithuanian
36,20% n-european
05,40% orcadian
04,60% utahn-white2
00,20% belorussian

[Leto]

An interesting sample. Could be a proto-Slav from Poland.

[Lucas]

WEZ15 which was biggest bam.

k36


Components %
Amerindian 0,00
Arabian 0,00
Armenian 0,00
Basque 8,40
Central_African 0,00
Central_Euro 1,25
East_African 0,00
East_Asian 0,00
East_Balkan 2,10
East_Central_Asian 0,00
East_Central_Euro 24,99
East_Med 0,00
Eastern_Euro 11,67
Fennoscandian 5,82
French 7,08
Iberian 13,34
Indo-Chinese 0,00
Italian 10,07
Malayan 0,00
Near_Eastern 0,00
North_African 0,00
North_Atlantic 8,46
North_Caucasian 0,00
North_Sea 3,59
Northeast_African 0,00
Oceanian 0,60
Omotic 0,00
Pygmy 0,00
Siberian 0,00
South_Asian 0,00
South_Central_Asian 0,00
South_Chinese 0,00
Volga-Ural 2,63
West_African 0,00
West_Caucasian 0,00
West_Med 0,00


| ADC: 1x
79.8 Slovakian
18.8 Carpathian_Rusyn
1.4 FR_South-West

ADC: 0.5x
70.6 Ukraine_north-east
15.0 FR_South-West
13.8 Portugal_Lisboa
0.6 Belarus_East


ADC: 0.25x
41.4 Ukraine_north-east
21.6 Portugal_Lisboa
20.8 Belarus_East
8.4 ES_Pais_Vasco
4.2 FR_Basque
3.6 Latvia_north-eastern


29.8 Latvia_north-eastern
29.4 Portugal_Lisboa
16.2 Belarus_East
12.4 FR_Basque
10.6 Ukraine_north-east
1.6 ES_Pais_Vasco

https://i.imgur.com/gfaJsFu.png

[Lucas]

WEZ15

Eurogenes K15

Components %
North_Sea 22,65
Atlantic 27,64
Baltic 24,73
Eastern_Euro 12,02
West_Med 11,28
West_Asian 0,00
East_Med 0,00
Red_Sea 0,00
South_Asian 0,00
Southeast_Asian 0,00
Siberian 0,00
Amerindian 0,00
Oceanian 1,68
Northeast_African 0,00
Sub-Saharan 0,00



Mixed Mode:
1 60,55% Lithuanian + 39,45% French_Basque @ 5,055
2 64,45% Estonian + 35,55% French_Basque @ 5,170
3 57,42% Latvian + 42,58% French_Basque @ 5,180
4 71,48% Polish + 28,52% French_Basque @ 6,278
5 65,23% Belorussian + 34,77% French_Basque @ 6,470
6 50,39% French_Basque + 49,61% Latvian @ 6,654
7 52,73% Lithuanian + 47,27% Southwest_French @ 6,810
8 56,64% Estonian + 43,36% Southwest_French @ 6,849
9 50,39% Southwest_French + 49,61% Lithuanian @ 6,971
10 50,39% Southwest_French + 49,61% Latvian @ 6,974

Least-squares method.

Using 1 populations approximation
1 100% Czech @ 10,630
2 100% East_German @ 11,683
3 100% Kaykavian_Croatian @ 12,705
4 100% Austrian @ 12,932
5 100% Slovenian @ 13,269
6 100% Polish @ 14,232
7 100% Slovak @ 14,339
8 100% South_Polish @ 14,483
9 100% Southwest_Finnish @ 14,587
10 100% Croatian @ 14,961

Using 2 populations approximation
1 50% Latvian + 50% French_Basque @ 6,520
2 50% Lithuanian + 50% Southwest_French @ 6,937
3 50% Southwest_French + 50% Latvian @ 6,979
4 50% Estonian + 50% Southwest_French @ 7,393
5 50% Lithuanian + 50% French_Basque @ 7,510
6 50% Latvian + 50% Spanish_Cantabria @ 7,640
7 50% Lithuanian + 50% Spanish_Cantabria @ 7,725
8 50% Latvian + 50% Spanish_Aragon @ 7,762
9 50% Lithuanian + 50% France-South @ 8,152
10 50% Lithuanian + 50% Spanish_Aragon @ 8,199

Using 3 populations approximation
1 33% Estonian + 33% Estonian + 33% French_Basque @ 5,320
2 33% Estonian_Polish + 33% Estonian + 33% French_Basque @ 5,603
3 33% Lithuanian + 33% Lithuanian + 33% French_Basque @ 5,965
4 33% Belorussian + 33% Belorussian + 33% French_Basque @ 6,510
5 33% Polish + 33% Polish + 33% French_Basque @ 6,583
6 33% Finnish + 33% Belorussian + 33% French_Basque @ 6,700
7 33% Belorussian + 33% Estonian_Polish + 33% French_Basque @ 6,860
8 33% Polish + 33% South_Polish + 33% French_Basque @ 7,096
9 33% Estonian_Polish + 33% Estonian_Polish + 33% French_Basque @ 7,279
10 33% Latvian + 33% Latvian + 33% French_Basque @ 7,398

Using 4 populations approximation
1 25% Lithuanian + 25% Lithuanian + 25% Danish + 25% French_Basque @ 5,170
2 25% Lithuanian + 25% Lithuanian + 25% Norway + 25% French_Basque @ 5,324
3 25% Latvian + 25% Latvian + 25% Orcadian + 25% French_Basque @ 5,570
4 25% Latvian + 25% Latvian + 25% West_Norwegian + 25% French_Basque @ 6,437
5 25% Polish + 25% Polish + 25% Polish + 25% French_Basque @ 6,503
6 25% Polish + 25% Polish + 25% South_Polish + 25% French_Basque @ 6,768
7 25% Ukraine_East + 25% Ukraine_East + 25% Swedish + 25% French_Basque @ 6,810
8 25% Ukraine_East + 25% Ukraine_East + 25% Southwest_English + 25% French_Basque @ 7,017
9 25% Polish + 25% Polish + 25% Slovak + 25% French_Basque @ 7,051
10 25% South_Polish + 25% South_Polish + 25% Southwest_Finnish + 25% French_Basque @ 7,226

[vbnetkhio]

k13

Components %
North_Atlantic 36,25
Baltic 47,93
West_Med 7,60
West_Asian 6,32
East_Med 0,00
Red_Sea 0,00
South_Asian 1,80
East_Asian 0,00
Siberian 0,00
Amerindian 0,00
Oceanian 0,11
Northeast_African 0,00
Sub-Saharan 0,00




Mixed Mode:
1 72,27% Lithuanian + 27,73% Norwegian @ 3,343


to me it looks like he just has extra WHG/EHG, which gets detected as Baltic and Scandinavian instead. similar to some Unetice samples and BR1 and 2 from Hungary

[Lucas]

to me it looks like he just has extra WHG/EHG, which gets detected as Baltic and Scandinavian instead. similar to some Unetice samples and BR1 and 2 from Hungary

Maybe, modern similarity to Poles or Balts is thousands years later.

[Lucas]

all samples K13



WEZ48,51.81,31.9,1.94,0,0,10.2,0,0,0,3.74,0.41,0,0
WEZ74,41.44,26.44,24.08,3.21,0,0,0,0.97,1.52,0,0,0 ,2.35
WEZ39,31.49,32.69,18.41,3.44,5.46,2.87,0,1.67,2.15 ,0,0.64,0,1.17
WEZ71,43.06,35.1,12.46,0,5.67,0,2.52,0,0,0,1.19,0, 0
WEZ53,34.38,32.03,23.89,4.3,0,4.39,0,0,0,0,1.02,0, 0
WEZ24,37.03,39.62,7.34,0,2.96,8.05,0,0,0,0,0,5.01, 0
WEZ83,41.89,37.4,10.9,0,0,3.64,0,2.59,0.56,1.2,1.8 2,0,0
WEZ51,31.12,42.21,8.23,2.69,11.71,0,0,0.39,0,0,1.8 5,1.81,0
WEZ57,36.16,21.67,18.71,0,11.82,3,4.38,0,0,0.64,3. 05,0.57,0
WEZ58,45.58,32.36,13.13,0,4.01,0.9,0,0,1.13,2.84,0 ,0,0.07
WEZ54,48.07,6.91,27.38,0,15.05,0.84,0,0,0,1.73,0,0 ,0
WEZ35,34.09,34.3,23.29,3.09,4.86,0.11,0,0,0,0,0,0, 0.27
WEZ40,35.66,44.66,8.86,1.18,3.63,0,0,0,3.53,0,0.96 ,0,1.53
WEZ64,36.65,42.41,12.9,0,0.03,2.33,0,0,0,0,2.31,0. 05,3.33
WEZ59,48.17,27.39,20.69,0,0,0,1.18,0,0,0,0,0,2.57
WEZ61,33.08,30.81,22.62,0.61,9.24,0,0.91,0,0,0.38, 1.47,0,0.87
WEZ15,41.73,36.27,18.31,0,0,0.94,0.33,0,0.01,0,2.4 1,0,0
WEZ16,35.75,11.6,49.37,0,0,0,0,0.73,0,0,0.91,0,1.6 4
WEZ56,36.25,47.93,7.6,6.32,0,0,1.8,0,0,0,0.11,0,0



k15

WEZ48,36.4,30.36,18.83,3.19,0.9,0,0,6.9,0,0,0,3.4, 0.03,0,0
WEZ74,21.48,34.24,7.61,16.08,17.83,0,0,0,0,0.14,0, 0,0,0,2.61
WEZ39,20.58,15.42,17.75,21.48,17.65,0,0,3.82,0,1.0 2,1.63,0,0.51,0,0.14
WEZ71,40.26,24.28,17.65,7.05,7.27,0,0.14,0,2.53,0, 0,0,0.84,0,0
WEZ53,23.75,23.82,16.48,11.93,18.01,3.15,0,2.48,0, 0,0,0,0.38,0,0
WEZ24,16.29,27.81,23.84,18.64,3.02,0,0,5.69,0,0,0, 0,0,4.71,0
WEZ83,36.46,15.39,15.31,20.13,8.31,0,0,0,0,1.84,0, 0.77,1.81,0,0
WEZ51,21.74,18.76,20.09,21.53,6.13,0,9.32,0,0,0,0, 0,1.31,1.12,0
WEZ57,25.65,22.24,12.7,6.29,14.7,0,5.34,5.63,3.92, 0,0,0.57,2.96,0,0
WEZ58,32.45,25.27,25.02,6.21,4.6,0,3.46,0,0,0,0.48 ,2.38,0,0,0.13
WEZ54,19.52,37.28,2.46,3.58,24.75,0,10.01,0.77,0,0 ,0,1.63,0,0,0
WEZ35,26.46,25.05,19.19,8.81,17.61,1.85,0,0.94,0,0 ,0,0,0,0,0.08
WEZ40,23.96,20.68,29.94,18.11,3.61,0,0,0,0,0,1.67, 0,0.27,0,1.75
WEZ64,32.76,17.06,28.29,8.15,8.37,0,0,0.57,0,0,0,0 ,1.66,0.02,3.13
WEZ59,27.06,33.9,11.09,12.11,13.74,0,0,0,0,0,0,0,0 ,0,2.1
WEZ61,19.97,25.75,16.01,13.05,16.66,0.53,5.3,0,0.7 ,0,0,0.08,1.24,0,0.71
WEZ15,22.65,27.64,24.73,12.02,11.28,0,0,0,0,0,0,0, 1.68,0,0
WEZ16,0.6,41.22,11.63,1.67,41.54,0,0,0,0,1.56,0,0, 0.35,0,1.43
WEZ56,27.42,22.79,32.98,12.79,2.07,1.15,0,0,0.8,0, 0,0,0,0,0