Log in

View Full Version : New option in vahaduo github called "reduce".



gixajo
01-02-2021, 01:48 PM
Iīve seen it just now, I have not try it yet.

https://i.imgur.com/yXQg6Qn.png

gixajo
01-02-2021, 02:01 PM
Well, Iīve tried it, so...we have a new feature to play, thatīs always something good,but I donīt know well if itīs useful or not.:confused:

Lucas
01-02-2021, 02:01 PM
It tells everything

https://i.imgur.com/UHCAHBW.png

Dušan
01-02-2021, 02:15 PM
This is good for K13 ancient, where you get 20-30 samples with no ADC.


Using this:

Target: Dušan
Distance: 50.6863% / 0.50686349 | R5P
31.6 I0449_Hungary_Tisza_LN_6700_ybp
27.8 Kivutkalns25_Latvia_BA_673_ybp
22.8 scy301_SG_Moldova_Scythian_SG
10.8 RK1003_Rasshevatskiy_1_N_Caucasus_4750_F_R1a1a_
7.0 I4875_Serbia_Iron_Gates_HG_8458_ybp


Target: Dušan
Distance: 85.8560% / 0.85856011 | R4P
55.4 Sungir6_Early_Medieval_Russian_I2a_I2a_
21.8 I3528_Hungary_Bell_Beaker_EBA_4300_ybp
12.0 I1658_Armenia_EBA_5170_ybp
10.8 I2526_Bulgaria_N_7336_ybp


Target: Dušan
Distance: 119.8734% / 1.19873364 | R3P
72.2 Sungir6_Early_Medieval_Russian_I2a_I2a_
18.0 I2376_Hungary_ALPc_Tiszadob_MN_7050_ybp
9.8 I1635_Armenia_EBA_4492_ybp

gixajo
01-02-2021, 03:05 PM
Pse...

Target: gixajo_mom
Distance: 62.1614% / 0.62161431 | R3P
61.0 I2478_Beaker_North_Italy_I2478_
28.2 I3582_Andalusia_Visigoth_
10.8 France_IA_ATT26

Target: gixajo_dad
Distance: 65.4556% / 0.65455591 | R3P
42.8 R63_Lazio_Rome_Medieval_Italy
34.4 I10866_iberia_
22.8 TOR.8_Iberia_EN_6980_ybp

Target: gixajo
Distance: 81.0650% / 0.81065034 | R3P
48.6 MBA_Portugal_TV32032_Portugal_1740-1430_BC
39.2 I7211_Czech_Bell_Beaker_4150_ybp
12.2 I1072_Israel_Raqefet_M_Natufian_12750_ybp

Gaditanian
01-02-2021, 07:33 PM
Distance: 32.5471% / 0.32547101 | R5P
46.0 I12515_iberia_
31.4 Kvarlov5164_Sweden_TRB_MN_5746_ybp
13.6 R109_Lazio_Rome_Italy_Late_Antiquity
5.8 STR316b_Germany_Early_Medieval.SG_1455_ybp
3.2 Mota1_Africa_

:confused:

Luso
01-02-2021, 09:37 PM
3 populations:

Target: Luso
Distance: 90.9338% / 0.90933812 | R3P
55.8 I7457_iberia_
25.4 I2478_Beaker_North_Italy_I2478_
18.8 STR316b_Germany_Early_Medieval.SG_1455_ybp

4 populations:

Target: Luso
Distance: 64.2320% / 0.64232005 | R4P
34.0 I10866_iberia_
23.8 STR316b_Germany_Early_Medieval.SG_1455_ybp
23.2 I3807_morisco_
19.0 I2425_Bulgaria_Late_C_6515_ybp

5 populations:

Target: Luso
Distance: 60.2972% / 0.60297226 | R5P
31.2 I10866_iberia_
25.0 I3807_morisco_
23.2 STR316b_Germany_Early_Medieval.SG_1455_ybp
15.4 I2425_Bulgaria_Late_C_6515_ybp
5.2 I3594_Germany_Bell_Beaker_4175_ybp

Pedro Ruben
01-02-2021, 09:53 PM
Target: Pedro
Distance: 147.3355% / 1.47335534 | R3P
43.8 I2462_England_CA_EBA_3960_ybp
43.2 I12515_iberia_
13.0 gun012_Canary_Islands_Guanche_mummy.SG_1329_ybp

Target: Dad
Distance: 134.4184% / 1.34418408 | R3P
40.0 I8146_Muslim_Iberian(Emirate_of_Granada)2_
39.0 I2416_England_Bell_Beaker_4285_ybp
21.0 I10866_iberia_

Target: Mom
Distance: 140.9000% / 1.40899965 | R3P
49.8 I7283_Czech_Bell_Beaker_mother.I7282_4200_ybp
39.6 I6581_Poland_Bell_Beaker_father.I6582_father.I6535 _4251_ybp
10.6 iam_5_N_Africa_5199_5176y_old_

calxpal
01-03-2021, 01:37 AM
K13 ancient

Target: cpal
Distance: 95.5672% / 0.95567223 | R3P
43.4 I4896_Czech_Bell_Beaker_4165_ybp
29.2 vik_84005_Sweden_Viking.SG_900_ybp
27.4 France_IA_NOR2B6

Target: cpal
Distance: 44.7878% / 0.44787774 | R4P
32.2 France_IA_NOR2B6
27.0 AED249_Germany_Early_Medieval.SG_1455_ybp
23.2 STR228_Germany_Early_Medieval.SG_1483_ybp
17.6 I4884_Czech_EBA_3764_ybp

Target: cpal
Distance: 32.4943% / 0.32494283 | R5P
26.6 I4076_Netherlands_Bell_Beaker_3767_ybp
23.8 Alh10_Germany_Early_Medieval.SG_1489_ybp
22.6 scy197_SG_Moldova_Scythian_SG
17.6 vik_grt036_Sweden_Viking.SG_878_ybp
9.4 ANI163_Bulgaria_Varna_EN3_6577_ybp

K13 updated



Target: cpal
Distance: 56.9939% / 0.56993862 | R5P
49.6 West_Scottish
26.4 Belorussian
11.4 Lebanese_Christian
7.4 Southwest_French
5.2 East_Finnish



Target: cpal
Distance: 65.9021% / 0.65902115 | R4P
48.6 Hungarian_Northern
40.2 West_Scottish
5.6 Norwegian
5.6 Saudi


Target: cpal
Distance: 90.2634% / 0.90263408 | R3P
84.8 German
9.8 East_Finnish
5.4 Saudi

Lucas
01-03-2021, 01:18 PM
Reduce added to all calcs here http://vahaduo.genetics.ovh
And Davidski G25 sheets here http://g25vahaduo.genetics.ovh
Also you can reduce from 2 to 7 pops:)

calxpal
01-04-2021, 02:23 AM
Now with 2 pops =)

K13 Ancient
Target: cpal
Distance: 2.3871% / 2.38714065 | R2P
54.3 I7249_Czech_Bell_Beaker_4000_ybp
45.7 ANI163_Bulgaria_Varna_EN3_6577_ybp


K13 Updated
Target: cpal
Distance: 2.3464% / 2.34638591 | R2P
80.6 German
19.4 Romania_Moldavia_North


K13 Original
Target: cpal
Distance: 2.0354% / 2.03544612 | R2P
51.3 Norwegian
48.7 Serbian