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View Full Version : qpAdm: "Pontic Greeks are the absolute original natives of Asia Minor/Anatolia".


kingmob
02-01-2022, 09:55 AM
Comment and discuss/provide suggestions:



1) 93.9% Turkey_CamlibelTarlasi_LateC + 6.1% Russia_Steppe_Maikop.




qpAdm: parameter file: parqpadm.txt
### THE INPUT PARAMETERS
##PARAMETER NAME: VALUE
fstatsname: fstatsa.txt
popleft: left.txt
popright: right.txt
details: YES
## qpAdm version: 1520
seed: 2002449110
*** recommended that inbreed be explicitly set ***
inbreed set NO

left pops:
ponticgreek
Turkey_CamlibelTarlasi_LateC
Russia_Steppe_Maikop

right pops:
Mbuti.DG
Russia_Ust_Ishim.DG
China_Tianyuan
Goyet_Neanderthal.SG
Russia_Sunghir3.SG
Russia_Kostenki14.SG
Russia_MA1_HG.SG
Georgia_Satsurblia.SG
Russia_DevilsCave_N.SG
Papuan.DG
Switzerland_Bichon.SG
Israel_Natufian_published
Iran_GanjDareh_N
Turkey_N.SG
ONG.SG

codimension 1
f4info:
f4rank: 1 dof: 13 chisq: 15.078 tail: 0.302515917 dofdiff: 15 chisqdiff: -15.078 taildiff: 1
B:
scale 1.000
Russia_Ust_Ishim.DG 0.534
China_Tianyuan 0.858
Goyet_Neanderthal.SG 0.064
Russia_Sunghir3.SG 0.437
Russia_Kostenki14.SG 0.509
Russia_MA1_HG.SG 2.713
Georgia_Satsurblia.SG -0.016
Russia_DevilsCave_N.SG 0.912
Papuan.DG 0.644
Switzerland_Bichon.SG 0.654
Israel_Natufian_published -1.017
Iran_GanjDareh_N 0.123
Turkey_N.SG -1.407
ONG.SG 0.680
A:
scale 311.151
Turkey_CamlibelTarlasi_LateC -0.091
Russia_Steppe_Maikop 1.411


full rank
f4info:
f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 13 chisqdiff: 15.078 taildiff: 0.302515917
B:
scale 1324.824 219.548
Russia_Ust_Ishim.DG 0.150 0.628
China_Tianyuan 0.068 0.946
Goyet_Neanderthal.SG 0.293 0.127
Russia_Sunghir3.SG -0.187 0.433
Russia_Kostenki14.SG -1.314 0.327
Russia_MA1_HG.SG -0.937 2.752
Georgia_Satsurblia.SG -2.582 -0.378
Russia_DevilsCave_N.SG -0.772 0.863
Papuan.DG -0.303 0.649
Switzerland_Bichon.SG -0.417 0.641
Israel_Natufian_published 1.534 -0.810
Iran_GanjDareh_N -0.984 0.010
Turkey_N.SG 0.370 -1.416
ONG.SG -0.512 0.668
A:
scale 1.414 1.414
Turkey_CamlibelTarlasi_LateC 1.414 0.000
Russia_Steppe_Maikop 0.000 1.414


best coefficients: 0.939 0.061
totmean: 0.939 0.061
boot mean: 0.939 0.061
std. errors: 0.033 0.033

error covariance (* 1,000,000)
1056 -1056
-1056 1056


summ: ponticgreek 2 0.302516 0.939 0.061 1056 -1056 1056

fixed pat wt dof chisq tail prob
00 0 13 15.078 0.302516 0.939 0.061
01 1 14 18.867 0.170099 1.000 0.000
10 1 14 732.624 0 0.000 1.000
best pat: 00 0.302516 - -
best pat: 01 0.170099 chi(nested): 3.789 p-value for nested model: 0.0515909

coeffs: 0.939 0.061

## dscore:: f_4(Base, Fit, Rbase, right2)
## genstat:: f_4(Base, Fit, right1, right2)

details: Turkey_CamlibelTarlasi_LateC Russia_Ust_Ishim.DG 0.000113 0.203187
details: Russia_Steppe_Maikop Russia_Ust_Ishim.DG 0.002861 4.572035
dscore: Russia_Ust_Ishim.DG f4: 0.000280 Z: 0.505926

details: Turkey_CamlibelTarlasi_LateC China_Tianyuan 0.000051 0.078066
details: Russia_Steppe_Maikop China_Tianyuan 0.004307 6.094888
dscore: China_Tianyuan f4: 0.000310 Z: 0.475827

details: Turkey_CamlibelTarlasi_LateC Goyet_Neanderthal.SG 0.000221 0.458903
details: Russia_Steppe_Maikop Goyet_Neanderthal.SG 0.000579 1.107919
dscore: Goyet_Neanderthal.SG f4: 0.000243 Z: 0.506727

details: Turkey_CamlibelTarlasi_LateC Russia_Sunghir3.SG -0.000141 -0.222357
details: Russia_Steppe_Maikop Russia_Sunghir3.SG 0.001971 2.840449
dscore: Russia_Sunghir3.SG f4: -0.000013 Z: -0.020670

details: Turkey_CamlibelTarlasi_LateC Russia_Kostenki14.SG -0.000992 -1.298923
details: Russia_Steppe_Maikop Russia_Kostenki14.SG 0.001489 1.840327
dscore: Russia_Kostenki14.SG f4: -0.000841 Z: -1.107368

details: Turkey_CamlibelTarlasi_LateC Russia_MA1_HG.SG -0.000707 -1.028239
details: Russia_Steppe_Maikop Russia_MA1_HG.SG 0.012535 16.246517
dscore: Russia_MA1_HG.SG f4: 0.000097 Z: 0.142245

details: Turkey_CamlibelTarlasi_LateC Georgia_Satsurblia.SG -0.001949 -2.735503
details: Russia_Steppe_Maikop Georgia_Satsurblia.SG -0.001720 -2.296846
dscore: Georgia_Satsurblia.SG f4: -0.001935 Z: -2.738754

details: Turkey_CamlibelTarlasi_LateC Russia_DevilsCave_N.SG -0.000583 -1.119599
details: Russia_Steppe_Maikop Russia_DevilsCave_N.SG 0.003931 6.791512
dscore: Russia_DevilsCave_N.SG f4: -0.000308 Z: -0.596568

details: Turkey_CamlibelTarlasi_LateC Papuan.DG -0.000228 -0.479667
details: Russia_Steppe_Maikop Papuan.DG 0.002956 5.659693
dscore: Papuan.DG f4: -0.000035 Z: -0.074195

details: Turkey_CamlibelTarlasi_LateC Switzerland_Bichon.SG -0.000315 -0.469648
details: Russia_Steppe_Maikop Switzerland_Bichon.SG 0.002921 3.886484
dscore: Switzerland_Bichon.SG f4: -0.000118 Z: -0.177142

details: Turkey_CamlibelTarlasi_LateC Israel_Natufian_published 0.001158 1.160998
details: Russia_Steppe_Maikop Israel_Natufian_published -0.003691 -3.551207
dscore: Israel_Natufian_published f4: 0.000864 Z: 0.869724

details: Turkey_CamlibelTarlasi_LateC Iran_GanjDareh_N -0.000743 -1.513575
details: Russia_Steppe_Maikop Iran_GanjDareh_N 0.000047 0.088939
dscore: Iran_GanjDareh_N f4: -0.000695 Z: -1.427139

details: Turkey_CamlibelTarlasi_LateC Turkey_N.SG 0.000279 0.560538
details: Russia_Steppe_Maikop Turkey_N.SG -0.006449 -12.083889
dscore: Turkey_N.SG f4: -0.000129 Z: -0.261627

details: Turkey_CamlibelTarlasi_LateC ONG.SG -0.000386 -0.803582
details: Russia_Steppe_Maikop ONG.SG 0.003041 5.729007
dscore: ONG.SG f4: -0.000178 Z: -0.373302

gendstat: Mbuti.DG Russia_Ust_Ishim.DG 0.506
gendstat: Mbuti.DG China_Tianyuan 0.476
gendstat: Mbuti.DG Goyet_Neanderthal.SG 0.507
gendstat: Mbuti.DG Russia_Sunghir3.SG -0.021
gendstat: Mbuti.DG Russia_Kostenki14.SG -1.107
gendstat: Mbuti.DG Russia_MA1_HG.SG 0.142
gendstat: Mbuti.DG Georgia_Satsurblia.SG -2.739
gendstat: Mbuti.DG Russia_DevilsCave_N.SG -0.597
gendstat: Mbuti.DG Papuan.DG -0.074
gendstat: Mbuti.DG Switzerland_Bichon.SG -0.177
gendstat: Mbuti.DG Israel_Natufian_published 0.870
gendstat: Mbuti.DG Iran_GanjDareh_N -1.427
gendstat: Mbuti.DG Turkey_N.SG -0.262
gendstat: Mbuti.DG ONG.SG -0.373
gendstat: Russia_Ust_Ishim.DG China_Tianyuan 0.043
gendstat: Russia_Ust_Ishim.DG Goyet_Neanderthal.SG -0.053
gendstat: Russia_Ust_Ishim.DG Russia_Sunghir3.SG -0.422
gendstat: Russia_Ust_Ishim.DG Russia_Kostenki14.SG -1.488
gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG -0.238
gendstat: Russia_Ust_Ishim.DG Georgia_Satsurblia.SG -2.891
gendstat: Russia_Ust_Ishim.DG Russia_DevilsCave_N.SG -0.975
gendstat: Russia_Ust_Ishim.DG Papuan.DG -0.537
gendstat: Russia_Ust_Ishim.DG Switzerland_Bichon.SG -0.553
gendstat: Russia_Ust_Ishim.DG Israel_Natufian_published 0.560
gendstat: Russia_Ust_Ishim.DG Iran_GanjDareh_N -1.634
gendstat: Russia_Ust_Ishim.DG Turkey_N.SG -0.695
gendstat: Russia_Ust_Ishim.DG ONG.SG -0.833
gendstat: China_Tianyuan Goyet_Neanderthal.SG -0.086
gendstat: China_Tianyuan Russia_Sunghir3.SG -0.443
gendstat: China_Tianyuan Russia_Kostenki14.SG -1.390
gendstat: China_Tianyuan Russia_MA1_HG.SG -0.270
gendstat: China_Tianyuan Georgia_Satsurblia.SG -2.663
gendstat: China_Tianyuan Russia_DevilsCave_N.SG -0.978
gendstat: China_Tianyuan Papuan.DG -0.545
gendstat: China_Tianyuan Switzerland_Bichon.SG -0.555
gendstat: China_Tianyuan Israel_Natufian_published 0.515
gendstat: China_Tianyuan Iran_GanjDareh_N -1.490
gendstat: China_Tianyuan Turkey_N.SG -0.695
gendstat: China_Tianyuan ONG.SG -0.794
gendstat: Goyet_Neanderthal.SG Russia_Sunghir3.SG -0.336
gendstat: Goyet_Neanderthal.SG Russia_Kostenki14.SG -1.238
gendstat: Goyet_Neanderthal.SG Russia_MA1_HG.SG -0.185
gendstat: Goyet_Neanderthal.SG Georgia_Satsurblia.SG -2.658
gendstat: Goyet_Neanderthal.SG Russia_DevilsCave_N.SG -0.830
gendstat: Goyet_Neanderthal.SG Papuan.DG -0.430
gendstat: Goyet_Neanderthal.SG Switzerland_Bichon.SG -0.471
gendstat: Goyet_Neanderthal.SG Israel_Natufian_published 0.577
gendstat: Goyet_Neanderthal.SG Iran_GanjDareh_N -1.448
gendstat: Goyet_Neanderthal.SG Turkey_N.SG -0.571
gendstat: Goyet_Neanderthal.SG ONG.SG -0.673
gendstat: Russia_Sunghir3.SG Russia_Kostenki14.SG -1.015
gendstat: Russia_Sunghir3.SG Russia_MA1_HG.SG 0.146
gendstat: Russia_Sunghir3.SG Georgia_Satsurblia.SG -2.274
gendstat: Russia_Sunghir3.SG Russia_DevilsCave_N.SG -0.455
gendstat: Russia_Sunghir3.SG Papuan.DG -0.035
gendstat: Russia_Sunghir3.SG Switzerland_Bichon.SG -0.149
gendstat: Russia_Sunghir3.SG Israel_Natufian_published 0.821
gendstat: Russia_Sunghir3.SG Iran_GanjDareh_N -1.023
gendstat: Russia_Sunghir3.SG Turkey_N.SG -0.186
gendstat: Russia_Sunghir3.SG ONG.SG -0.254
gendstat: Russia_Kostenki14.SG Russia_MA1_HG.SG 1.019
gendstat: Russia_Kostenki14.SG Georgia_Satsurblia.SG -1.219
gendstat: Russia_Kostenki14.SG Russia_DevilsCave_N.SG 0.666
gendstat: Russia_Kostenki14.SG Papuan.DG 1.060
gendstat: Russia_Kostenki14.SG Switzerland_Bichon.SG 0.833
gendstat: Russia_Kostenki14.SG Israel_Natufian_published 1.466
gendstat: Russia_Kostenki14.SG Iran_GanjDareh_N 0.187
gendstat: Russia_Kostenki14.SG Turkey_N.SG 1.005
gendstat: Russia_Kostenki14.SG ONG.SG 0.887
gendstat: Russia_MA1_HG.SG Georgia_Satsurblia.SG -2.383
gendstat: Russia_MA1_HG.SG Russia_DevilsCave_N.SG -0.593
gendstat: Russia_MA1_HG.SG Papuan.DG -0.196
gendstat: Russia_MA1_HG.SG Switzerland_Bichon.SG -0.287
gendstat: Russia_MA1_HG.SG Israel_Natufian_published 0.693
gendstat: Russia_MA1_HG.SG Iran_GanjDareh_N -1.183
gendstat: Russia_MA1_HG.SG Turkey_N.SG -0.330
gendstat: Russia_MA1_HG.SG ONG.SG -0.409
gendstat: Georgia_Satsurblia.SG Russia_DevilsCave_N.SG 2.164
gendstat: Georgia_Satsurblia.SG Papuan.DG 2.655
gendstat: Georgia_Satsurblia.SG Switzerland_Bichon.SG 2.201
gendstat: Georgia_Satsurblia.SG Israel_Natufian_published 2.467
gendstat: Georgia_Satsurblia.SG Iran_GanjDareh_N 1.815
gendstat: Georgia_Satsurblia.SG Turkey_N.SG 2.625
gendstat: Georgia_Satsurblia.SG ONG.SG 2.557
gendstat: Russia_DevilsCave_N.SG Papuan.DG 0.548
gendstat: Russia_DevilsCave_N.SG Switzerland_Bichon.SG 0.279
gendstat: Russia_DevilsCave_N.SG Israel_Natufian_published 1.170
gendstat: Russia_DevilsCave_N.SG Iran_GanjDareh_N -0.693
gendstat: Russia_DevilsCave_N.SG Turkey_N.SG 0.325
gendstat: Russia_DevilsCave_N.SG ONG.SG 0.273
gendstat: Papuan.DG Switzerland_Bichon.SG -0.124
gendstat: Papuan.DG Israel_Natufian_published 0.875
gendstat: Papuan.DG Iran_GanjDareh_N -1.282
gendstat: Papuan.DG Turkey_N.SG -0.177
gendstat: Papuan.DG ONG.SG -0.315
gendstat: Switzerland_Bichon.SG Israel_Natufian_published 0.893
gendstat: Switzerland_Bichon.SG Iran_GanjDareh_N -0.876
gendstat: Switzerland_Bichon.SG Turkey_N.SG -0.018
gendstat: Switzerland_Bichon.SG ONG.SG -0.090
gendstat: Israel_Natufian_published Iran_GanjDareh_N -1.574
gendstat: Israel_Natufian_published Turkey_N.SG -1.017
gendstat: Israel_Natufian_published ONG.SG -1.039
gendstat: Iran_GanjDareh_N Turkey_N.SG 1.107
gendstat: Iran_GanjDareh_N ONG.SG 0.993
gendstat: Turkey_N.SG ONG.SG -0.093

##end of qpAdm: 2.324 seconds cpu 0.827 Mbytes in use


2) 96.7% Turkey_Ikiztepe_LateC + 3.3% Russia_Steppe_Maikop.




qpAdm: parameter file: parqpadm.txt
### THE INPUT PARAMETERS
##PARAMETER NAME: VALUE
fstatsname: fstatsa.txt
popleft: left.txt
popright: right.txt
details: YES
## qpAdm version: 1520
seed: 2004819702
*** recommended that inbreed be explicitly set ***
inbreed set NO

left pops:
ponticgreek
Turkey_Ikiztepe_LateC
Russia_Steppe_Maikop

right pops:
Mbuti.DG
Russia_Ust_Ishim.DG
China_Tianyuan
Goyet_Neanderthal.SG
Russia_Sunghir3.SG
Russia_Kostenki14.SG
Russia_MA1_HG.SG
Georgia_Satsurblia.SG
Russia_DevilsCave_N.SG
Papuan.DG
Switzerland_Bichon.SG
Israel_Natufian_published
Iran_GanjDareh_N
Turkey_N.SG
ONG.SG

codimension 1
f4info:
f4rank: 1 dof: 13 chisq: 13.696 tail: 0.39556148 dofdiff: 15 chisqdiff: -13.696 taildiff: 1
B:
scale 1.000
Russia_Ust_Ishim.DG 0.479
China_Tianyuan 0.918
Goyet_Neanderthal.SG 0.043
Russia_Sunghir3.SG 0.403
Russia_Kostenki14.SG 0.512
Russia_MA1_HG.SG 2.701
Georgia_Satsurblia.SG -0.121
Russia_DevilsCave_N.SG 0.863
Papuan.DG 0.657
Switzerland_Bichon.SG 0.641
Israel_Natufian_published -1.063
Iran_GanjDareh_N -0.010
Turkey_N.SG -1.442
ONG.SG 0.626
A:
scale 314.773
Turkey_Ikiztepe_LateC -0.048
Russia_Steppe_Maikop 1.413


full rank
f4info:
f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 13 chisqdiff: 13.696 taildiff: 0.39556148
B:
scale 1492.365 219.548
Russia_Ust_Ishim.DG 0.898 0.628
China_Tianyuan 0.020 0.946
Goyet_Neanderthal.SG 0.566 0.127
Russia_Sunghir3.SG 0.098 0.433
Russia_Kostenki14.SG -1.628 0.327
Russia_MA1_HG.SG 0.116 2.752
Georgia_Satsurblia.SG -2.325 -0.378
Russia_DevilsCave_N.SG -0.233 0.863
Papuan.DG -0.140 0.649
Switzerland_Bichon.SG -0.174 0.641
Israel_Natufian_published 2.145 -0.810
Iran_GanjDareh_N 0.046 0.010
Turkey_N.SG 0.282 -1.416
ONG.SG 0.066 0.668
A:
scale 1.414 1.414
Turkey_Ikiztepe_LateC 1.414 0.000
Russia_Steppe_Maikop 0.000 1.414


best coefficients: 0.967 0.033
totmean: 0.967 0.033
boot mean: 0.968 0.032
std. errors: 0.036 0.036

error covariance (* 1,000,000)
1282 -1282
-1282 1282


summ: ponticgreek 2 0.395561 0.968 0.032 1282 -1282 1282

fixed pat wt dof chisq tail prob
00 0 13 13.696 0.395561 0.967 0.033
01 1 14 14.612 0.405155 1.000 0.000
10 1 14 732.410 0 0.000 1.000
best pat: 00 0.395561 - -
best pat: 01 0.405155 chi(nested): 0.916 p-value for nested model: 0.338558

coeffs: 0.967 0.033

## dscore:: f_4(Base, Fit, Rbase, right2)
## genstat:: f_4(Base, Fit, right1, right2)

details: Turkey_Ikiztepe_LateC Russia_Ust_Ishim.DG 0.000602 1.052320
details: Russia_Steppe_Maikop Russia_Ust_Ishim.DG 0.002861 4.572035
dscore: Russia_Ust_Ishim.DG f4: 0.000675 Z: 1.187818

details: Turkey_Ikiztepe_LateC China_Tianyuan 0.000013 0.019543
details: Russia_Steppe_Maikop China_Tianyuan 0.004307 6.094888
dscore: China_Tianyuan f4: 0.000154 Z: 0.225157

details: Turkey_Ikiztepe_LateC Goyet_Neanderthal.SG 0.000380 0.706325
details: Russia_Steppe_Maikop Goyet_Neanderthal.SG 0.000579 1.107919
dscore: Goyet_Neanderthal.SG f4: 0.000386 Z: 0.724506

details: Turkey_Ikiztepe_LateC Russia_Sunghir3.SG 0.000066 0.094522
details: Russia_Steppe_Maikop Russia_Sunghir3.SG 0.001971 2.840449
dscore: Russia_Sunghir3.SG f4: 0.000128 Z: 0.185192

details: Turkey_Ikiztepe_LateC Russia_Kostenki14.SG -0.001091 -1.362484
details: Russia_Steppe_Maikop Russia_Kostenki14.SG 0.001489 1.840327
dscore: Russia_Kostenki14.SG f4: -0.001007 Z: -1.264106

details: Turkey_Ikiztepe_LateC Russia_MA1_HG.SG 0.000078 0.106828
details: Russia_Steppe_Maikop Russia_MA1_HG.SG 0.012535 16.246517
dscore: Russia_MA1_HG.SG f4: 0.000485 Z: 0.668742

details: Turkey_Ikiztepe_LateC Georgia_Satsurblia.SG -0.001558 -2.025161
details: Russia_Steppe_Maikop Georgia_Satsurblia.SG -0.001720 -2.296846
dscore: Georgia_Satsurblia.SG f4: -0.001563 Z: -2.049089

details: Turkey_Ikiztepe_LateC Russia_DevilsCave_N.SG -0.000156 -0.282457
details: Russia_Steppe_Maikop Russia_DevilsCave_N.SG 0.003931 6.791512
dscore: Russia_DevilsCave_N.SG f4: -0.000023 Z: -0.041210

details: Turkey_Ikiztepe_LateC Papuan.DG -0.000094 -0.185099
details: Russia_Steppe_Maikop Papuan.DG 0.002956 5.659693
dscore: Papuan.DG f4: 0.000006 Z: 0.011110

details: Turkey_Ikiztepe_LateC Switzerland_Bichon.SG -0.000117 -0.164829
details: Russia_Steppe_Maikop Switzerland_Bichon.SG 0.002921 3.886484
dscore: Switzerland_Bichon.SG f4: -0.000017 Z: -0.024572

details: Turkey_Ikiztepe_LateC Israel_Natufian_published 0.001437 1.374078
details: Russia_Steppe_Maikop Israel_Natufian_published -0.003691 -3.551207
dscore: Israel_Natufian_published f4: 0.001270 Z: 1.221686

details: Turkey_Ikiztepe_LateC Iran_GanjDareh_N 0.000031 0.060108
details: Russia_Steppe_Maikop Iran_GanjDareh_N 0.000047 0.088939
dscore: Iran_GanjDareh_N f4: 0.000031 Z: 0.061549

details: Turkey_Ikiztepe_LateC Turkey_N.SG 0.000189 0.358380
details: Russia_Steppe_Maikop Turkey_N.SG -0.006449 -12.083889
dscore: Turkey_N.SG f4: -0.000028 Z: -0.053598

details: Turkey_Ikiztepe_LateC ONG.SG 0.000044 0.085861
details: Russia_Steppe_Maikop ONG.SG 0.003041 5.729007
dscore: ONG.SG f4: 0.000142 Z: 0.277225

gendstat: Mbuti.DG Russia_Ust_Ishim.DG 1.188
gendstat: Mbuti.DG China_Tianyuan 0.225
gendstat: Mbuti.DG Goyet_Neanderthal.SG 0.725
gendstat: Mbuti.DG Russia_Sunghir3.SG 0.185
gendstat: Mbuti.DG Russia_Kostenki14.SG -1.264
gendstat: Mbuti.DG Russia_MA1_HG.SG 0.669
gendstat: Mbuti.DG Georgia_Satsurblia.SG -2.049
gendstat: Mbuti.DG Russia_DevilsCave_N.SG -0.041
gendstat: Mbuti.DG Papuan.DG 0.011
gendstat: Mbuti.DG Switzerland_Bichon.SG -0.025
gendstat: Mbuti.DG Israel_Natufian_published 1.222
gendstat: Mbuti.DG Iran_GanjDareh_N 0.062
gendstat: Mbuti.DG Turkey_N.SG -0.054
gendstat: Mbuti.DG ONG.SG 0.277
gendstat: Russia_Ust_Ishim.DG China_Tianyuan -0.723
gendstat: Russia_Ust_Ishim.DG Goyet_Neanderthal.SG -0.394
gendstat: Russia_Ust_Ishim.DG Russia_Sunghir3.SG -0.771
gendstat: Russia_Ust_Ishim.DG Russia_Kostenki14.SG -2.140
gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG -0.242
gendstat: Russia_Ust_Ishim.DG Georgia_Satsurblia.SG -2.773
gendstat: Russia_Ust_Ishim.DG Russia_DevilsCave_N.SG -1.096
gendstat: Russia_Ust_Ishim.DG Papuan.DG -1.107
gendstat: Russia_Ust_Ishim.DG Switzerland_Bichon.SG -0.913
gendstat: Russia_Ust_Ishim.DG Israel_Natufian_published 0.544
gendstat: Russia_Ust_Ishim.DG Iran_GanjDareh_N -1.058
gendstat: Russia_Ust_Ishim.DG Turkey_N.SG -1.169
gendstat: Russia_Ust_Ishim.DG ONG.SG -0.908
gendstat: China_Tianyuan Goyet_Neanderthal.SG 0.290
gendstat: China_Tianyuan Russia_Sunghir3.SG -0.034
gendstat: China_Tianyuan Russia_Kostenki14.SG -1.291
gendstat: China_Tianyuan Russia_MA1_HG.SG 0.401
gendstat: China_Tianyuan Georgia_Satsurblia.SG -1.933
gendstat: China_Tianyuan Russia_DevilsCave_N.SG -0.261
gendstat: China_Tianyuan Papuan.DG -0.231
gendstat: China_Tianyuan Switzerland_Bichon.SG -0.206
gendstat: China_Tianyuan Israel_Natufian_published 1.018
gendstat: China_Tianyuan Iran_GanjDareh_N -0.178
gendstat: China_Tianyuan Turkey_N.SG -0.272
gendstat: China_Tianyuan ONG.SG -0.018
gendstat: Goyet_Neanderthal.SG Russia_Sunghir3.SG -0.318
gendstat: Goyet_Neanderthal.SG Russia_Kostenki14.SG -1.512
gendstat: Goyet_Neanderthal.SG Russia_MA1_HG.SG 0.121
gendstat: Goyet_Neanderthal.SG Georgia_Satsurblia.SG -2.217
gendstat: Goyet_Neanderthal.SG Russia_DevilsCave_N.SG -0.591
gendstat: Goyet_Neanderthal.SG Papuan.DG -0.562
gendstat: Goyet_Neanderthal.SG Switzerland_Bichon.SG -0.491
gendstat: Goyet_Neanderthal.SG Israel_Natufian_published 0.780
gendstat: Goyet_Neanderthal.SG Iran_GanjDareh_N -0.518
gendstat: Goyet_Neanderthal.SG Turkey_N.SG -0.588
gendstat: Goyet_Neanderthal.SG ONG.SG -0.364
gendstat: Russia_Sunghir3.SG Russia_Kostenki14.SG -1.350
gendstat: Russia_Sunghir3.SG Russia_MA1_HG.SG 0.436
gendstat: Russia_Sunghir3.SG Georgia_Satsurblia.SG -1.919
gendstat: Russia_Sunghir3.SG Russia_DevilsCave_N.SG -0.216
gendstat: Russia_Sunghir3.SG Papuan.DG -0.185
gendstat: Russia_Sunghir3.SG Switzerland_Bichon.SG -0.193
gendstat: Russia_Sunghir3.SG Israel_Natufian_published 1.037
gendstat: Russia_Sunghir3.SG Iran_GanjDareh_N -0.139
gendstat: Russia_Sunghir3.SG Turkey_N.SG -0.235
gendstat: Russia_Sunghir3.SG ONG.SG 0.020
gendstat: Russia_Kostenki14.SG Russia_MA1_HG.SG 1.520
gendstat: Russia_Kostenki14.SG Georgia_Satsurblia.SG -0.577
gendstat: Russia_Kostenki14.SG Russia_DevilsCave_N.SG 1.152
gendstat: Russia_Kostenki14.SG Papuan.DG 1.256
gendstat: Russia_Kostenki14.SG Switzerland_Bichon.SG 1.087
gendstat: Russia_Kostenki14.SG Israel_Natufian_published 1.867
gendstat: Russia_Kostenki14.SG Iran_GanjDareh_N 1.284
gendstat: Russia_Kostenki14.SG Turkey_N.SG 1.330
gendstat: Russia_Kostenki14.SG ONG.SG 1.468
gendstat: Russia_MA1_HG.SG Georgia_Satsurblia.SG -2.264
gendstat: Russia_MA1_HG.SG Russia_DevilsCave_N.SG -0.707
gendstat: Russia_MA1_HG.SG Papuan.DG -0.686
gendstat: Russia_MA1_HG.SG Switzerland_Bichon.SG -0.624
gendstat: Russia_MA1_HG.SG Israel_Natufian_published 0.690
gendstat: Russia_MA1_HG.SG Iran_GanjDareh_N -0.640
gendstat: Russia_MA1_HG.SG Turkey_N.SG -0.694
gendstat: Russia_MA1_HG.SG ONG.SG -0.480
gendstat: Georgia_Satsurblia.SG Russia_DevilsCave_N.SG 1.936
gendstat: Georgia_Satsurblia.SG Papuan.DG 2.037
gendstat: Georgia_Satsurblia.SG Switzerland_Bichon.SG 1.762
gendstat: Georgia_Satsurblia.SG Israel_Natufian_published 2.401
gendstat: Georgia_Satsurblia.SG Iran_GanjDareh_N 2.191
gendstat: Georgia_Satsurblia.SG Turkey_N.SG 2.092
gendstat: Georgia_Satsurblia.SG ONG.SG 2.287
gendstat: Russia_DevilsCave_N.SG Papuan.DG 0.055
gendstat: Russia_DevilsCave_N.SG Switzerland_Bichon.SG 0.007
gendstat: Russia_DevilsCave_N.SG Israel_Natufian_published 1.243
gendstat: Russia_DevilsCave_N.SG Iran_GanjDareh_N 0.094
gendstat: Russia_DevilsCave_N.SG Turkey_N.SG -0.009
gendstat: Russia_DevilsCave_N.SG ONG.SG 0.327
gendstat: Papuan.DG Switzerland_Bichon.SG -0.033
gendstat: Papuan.DG Israel_Natufian_published 1.186
gendstat: Papuan.DG Iran_GanjDareh_N 0.049
gendstat: Papuan.DG Turkey_N.SG -0.062
gendstat: Papuan.DG ONG.SG 0.294
gendstat: Switzerland_Bichon.SG Israel_Natufian_published 1.105
gendstat: Switzerland_Bichon.SG Iran_GanjDareh_N 0.069
gendstat: Switzerland_Bichon.SG Turkey_N.SG -0.016
gendstat: Switzerland_Bichon.SG ONG.SG 0.226
gendstat: Israel_Natufian_published Iran_GanjDareh_N -1.195
gendstat: Israel_Natufian_published Turkey_N.SG -1.274
gendstat: Israel_Natufian_published ONG.SG -1.084
gendstat: Iran_GanjDareh_N Turkey_N.SG -0.111
gendstat: Iran_GanjDareh_N ONG.SG 0.205
gendstat: Turkey_N.SG ONG.SG 0.307

##end of qpAdm: 2.314 seconds cpu 0.827 Mbytes in use
Sterling Archer
02-01-2022, 10:32 AM
Pontic Greeks are the absolute original natives of Asia Minor/Anatolia

I don't see any need for a discussion. This has been well known for a while now. Pontic Greeks are thoroughly Hellenized Black Sea natives like Laz and Turks of that region.
kingmob
02-01-2022, 11:03 AM
Post your Laz and Turkish fstats for comparison, I don't have access to such samples.
kingmob
02-01-2022, 06:51 PM
3) 36.6% Spain_Greek_oAegean (Greek colony Emporion) + 63.4% Armenia_EBA_KuraAraxes.





qpAdm: parameter file: parqpadm.txt
### THE INPUT PARAMETERS
##PARAMETER NAME: VALUE
fstatsname: fstatsa.txt
popleft: left.txt
popright: right.txt
details: YES
## qpAdm version: 1520
seed: 2082411939
*** recommended that inbreed be explicitly set ***
inbreed set NO

left pops:
ponticgreek
Armenia_EBA_KuraAraxes
Spain_Greek_oAegean

right pops:
Mbuti.DG
Russia_Ust_Ishim.DG
China_Tianyuan
Goyet_Neanderthal.SG
Iran_GanjDareh_N
Georgia_Kotias.SG
Turkey_N_published
Russia_MA1_HG.SG
Georgia_Satsurblia.SG
Papuan.DG
Israel_Natufian_published
Russia_DevilsCave_N.SG
ONG.SG
Greece_Minoan_Lassithi
Russia_MLBA_Sintashta_published

codimension 1
f4info:
f4rank: 1 dof: 13 chisq: 13.096 tail: 0.440396895 dofdiff: 15 chisqdiff: -13.096 taildiff: 1
B:
scale 1.000
Russia_Ust_Ishim.DG 0.659
China_Tianyuan 0.527
Goyet_Neanderthal.SG 0.443
Iran_GanjDareh_N -0.860
Georgia_Kotias.SG -0.645
Turkey_N_published 2.115
Russia_MA1_HG.SG 0.102
Georgia_Satsurblia.SG -0.991
Papuan.DG 0.000
Israel_Natufian_published 1.261
Russia_DevilsCave_N.SG 0.800
ONG.SG 0.344
Greece_Minoan_Lassithi 1.930
Russia_MLBA_Sintashta_published 0.631
A:
scale 1020.840
Armenia_EBA_KuraAraxes -0.707
Spain_Greek_oAegean 1.225


full rank
f4info:
f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 13 chisqdiff: 13.096 taildiff: 0.440396895
B:
scale 854.305 826.934
Russia_Ust_Ishim.DG -0.707 0.323
China_Tianyuan -1.103 -0.230
Goyet_Neanderthal.SG -0.311 0.359
Iran_GanjDareh_N -0.473 -1.772
Georgia_Kotias.SG -0.457 -1.462
Turkey_N_published -2.219 1.174
Russia_MA1_HG.SG -0.611 -0.492
Georgia_Satsurblia.SG -0.446 -1.868
Papuan.DG -0.165 -0.151
Israel_Natufian_published -1.490 0.495
Russia_DevilsCave_N.SG -0.912 0.303
ONG.SG -0.902 -0.350
Greece_Minoan_Lassithi -1.524 1.508
Russia_MLBA_Sintashta_published -0.206 0.757
A:
scale 1.414 1.414
Armenia_EBA_KuraAraxes 1.414 0.000
Spain_Greek_oAegean 0.000 1.414


best coefficients: 0.634 0.366
totmean: 0.634 0.366
boot mean: 0.634 0.366
std. errors: 0.071 0.071

error covariance (* 1,000,000)
5067 -5067
-5067 5067


summ: ponticgreek 2 0.440397 0.634 0.366 5067 -5067 5067

fixed pat wt dof chisq tail prob
00 0 13 13.096 0.440397 0.634 0.366
01 1 14 39.179 0.000342224 1.000 0.000
10 1 14 78.057 6.47548e-11 0.000 1.000
best pat: 00 0.440397 - -
best pat: 01 0.000342224 chi(nested): 26.083 p-value for nested model: 3.27129e-07

coeffs: 0.634 0.366

## dscore:: f_4(Base, Fit, Rbase, right2)
## genstat:: f_4(Base, Fit, right1, right2)

details: Armenia_EBA_KuraAraxes Russia_Ust_Ishim.DG -0.000827 -1.410079
details: Spain_Greek_oAegean Russia_Ust_Ishim.DG 0.000391 0.598094
dscore: Russia_Ust_Ishim.DG f4: -0.000381 Z: -0.687975

details: Armenia_EBA_KuraAraxes China_Tianyuan -0.001291 -1.851378
details: Spain_Greek_oAegean China_Tianyuan -0.000278 -0.366753
dscore: China_Tianyuan f4: -0.000920 Z: -1.388268

details: Armenia_EBA_KuraAraxes Goyet_Neanderthal.SG -0.000364 -0.708318
details: Spain_Greek_oAegean Goyet_Neanderthal.SG 0.000434 0.780587
dscore: Goyet_Neanderthal.SG f4: -0.000072 Z: -0.147249

details: Armenia_EBA_KuraAraxes Iran_GanjDareh_N -0.000554 -1.113533
details: Spain_Greek_oAegean Iran_GanjDareh_N -0.002142 -4.212467
dscore: Iran_GanjDareh_N f4: -0.001135 Z: -2.460481

details: Armenia_EBA_KuraAraxes Georgia_Kotias.SG -0.000535 -0.681180
details: Spain_Greek_oAegean Georgia_Kotias.SG -0.001768 -2.139176
dscore: Georgia_Kotias.SG f4: -0.000986 Z: -1.311049

details: Armenia_EBA_KuraAraxes Turkey_N_published -0.002597 -5.365174
details: Spain_Greek_oAegean Turkey_N_published 0.001420 2.617976
dscore: Turkey_N_published f4: -0.001128 Z: -2.421211

details: Armenia_EBA_KuraAraxes Russia_MA1_HG.SG -0.000715 -0.998476
details: Spain_Greek_oAegean Russia_MA1_HG.SG -0.000595 -0.729477
dscore: Russia_MA1_HG.SG f4: -0.000671 Z: -0.970344

details: Armenia_EBA_KuraAraxes Georgia_Satsurblia.SG -0.000522 -0.698040
details: Spain_Greek_oAegean Georgia_Satsurblia.SG -0.002259 -2.847082
dscore: Georgia_Satsurblia.SG f4: -0.001157 Z: -1.639613

details: Armenia_EBA_KuraAraxes Papuan.DG -0.000193 -0.361422
details: Spain_Greek_oAegean Papuan.DG -0.000183 -0.327840
dscore: Papuan.DG f4: -0.000190 Z: -0.380222

details: Armenia_EBA_KuraAraxes Israel_Natufian_published -0.001745 -1.730207
details: Spain_Greek_oAegean Israel_Natufian_published 0.000598 0.558059
dscore: Israel_Natufian_published f4: -0.000887 Z: -0.912899

details: Armenia_EBA_KuraAraxes Russia_DevilsCave_N.SG -0.001067 -2.029116
details: Spain_Greek_oAegean Russia_DevilsCave_N.SG 0.000367 0.597337
dscore: Russia_DevilsCave_N.SG f4: -0.000543 Z: -1.061697

details: Armenia_EBA_KuraAraxes ONG.SG -0.001055 -2.100232
details: Spain_Greek_oAegean ONG.SG -0.000424 -0.762939
dscore: ONG.SG f4: -0.000824 Z: -1.725695

details: Armenia_EBA_KuraAraxes Greece_Minoan_Lassithi -0.001784 -3.353382
details: Spain_Greek_oAegean Greece_Minoan_Lassithi 0.001824 3.142780
dscore: Greece_Minoan_Lassithi f4: -0.000464 Z: -0.911068

details: Armenia_EBA_KuraAraxes Russia_MLBA_Sintashta_published -0.000241 -0.250383
details: Spain_Greek_oAegean Russia_MLBA_Sintashta_published 0.000915 0.903575
dscore: Russia_MLBA_Sintashta_published f4: 0.000182 Z: 0.198004

gendstat: Mbuti.DG Russia_Ust_Ishim.DG -0.688
gendstat: Mbuti.DG China_Tianyuan -1.388
gendstat: Mbuti.DG Goyet_Neanderthal.SG -0.147
gendstat: Mbuti.DG Iran_GanjDareh_N -2.460
gendstat: Mbuti.DG Georgia_Kotias.SG -1.311
gendstat: Mbuti.DG Turkey_N_published -2.421
gendstat: Mbuti.DG Russia_MA1_HG.SG -0.970
gendstat: Mbuti.DG Georgia_Satsurblia.SG -1.640
gendstat: Mbuti.DG Papuan.DG -0.380
gendstat: Mbuti.DG Israel_Natufian_published -0.913
gendstat: Mbuti.DG Russia_DevilsCave_N.SG -1.062
gendstat: Mbuti.DG ONG.SG -1.726
gendstat: Mbuti.DG Greece_Minoan_Lassithi -0.911
gendstat: Mbuti.DG Russia_MLBA_Sintashta_published 0.198
gendstat: Russia_Ust_Ishim.DG China_Tianyuan -0.757
gendstat: Russia_Ust_Ishim.DG Goyet_Neanderthal.SG 0.442
gendstat: Russia_Ust_Ishim.DG Iran_GanjDareh_N -1.261
gendstat: Russia_Ust_Ishim.DG Georgia_Kotias.SG -0.745
gendstat: Russia_Ust_Ishim.DG Turkey_N_published -1.284
gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG -0.400
gendstat: Russia_Ust_Ishim.DG Georgia_Satsurblia.SG -0.952
gendstat: Russia_Ust_Ishim.DG Papuan.DG 0.310
gendstat: Russia_Ust_Ishim.DG Israel_Natufian_published -0.490
gendstat: Russia_Ust_Ishim.DG Russia_DevilsCave_N.SG -0.257
gendstat: Russia_Ust_Ishim.DG ONG.SG -0.786
gendstat: Russia_Ust_Ishim.DG Greece_Minoan_Lassithi -0.137
gendstat: Russia_Ust_Ishim.DG Russia_MLBA_Sintashta_published 0.587
gendstat: China_Tianyuan Goyet_Neanderthal.SG 1.054
gendstat: China_Tianyuan Iran_GanjDareh_N -0.323
gendstat: China_Tianyuan Georgia_Kotias.SG -0.078
gendstat: China_Tianyuan Turkey_N_published -0.322
gendstat: China_Tianyuan Russia_MA1_HG.SG 0.294
gendstat: China_Tianyuan Georgia_Satsurblia.SG -0.268
gendstat: China_Tianyuan Papuan.DG 1.043
gendstat: China_Tianyuan Israel_Natufian_published 0.029
gendstat: China_Tianyuan Russia_DevilsCave_N.SG 0.579
gendstat: China_Tianyuan ONG.SG 0.147
gendstat: China_Tianyuan Greece_Minoan_Lassithi 0.618
gendstat: China_Tianyuan Russia_MLBA_Sintashta_published 1.106
gendstat: Goyet_Neanderthal.SG Iran_GanjDareh_N -1.663
gendstat: Goyet_Neanderthal.SG Georgia_Kotias.SG -0.988
gendstat: Goyet_Neanderthal.SG Turkey_N_published -1.673
gendstat: Goyet_Neanderthal.SG Russia_MA1_HG.SG -0.734
gendstat: Goyet_Neanderthal.SG Georgia_Satsurblia.SG -1.285
gendstat: Goyet_Neanderthal.SG Papuan.DG -0.178
gendstat: Goyet_Neanderthal.SG Israel_Natufian_published -0.775
gendstat: Goyet_Neanderthal.SG Russia_DevilsCave_N.SG -0.689
gendstat: Goyet_Neanderthal.SG ONG.SG -1.165
gendstat: Goyet_Neanderthal.SG Greece_Minoan_Lassithi -0.585
gendstat: Goyet_Neanderthal.SG Russia_MLBA_Sintashta_published 0.251
gendstat: Iran_GanjDareh_N Georgia_Kotias.SG 0.209
gendstat: Iran_GanjDareh_N Turkey_N_published 0.016
gendstat: Iran_GanjDareh_N Russia_MA1_HG.SG 0.666
gendstat: Iran_GanjDareh_N Georgia_Satsurblia.SG -0.031
gendstat: Iran_GanjDareh_N Papuan.DG 1.729
gendstat: Iran_GanjDareh_N Israel_Natufian_published 0.248
gendstat: Iran_GanjDareh_N Russia_DevilsCave_N.SG 1.079
gendstat: Iran_GanjDareh_N ONG.SG 0.622
gendstat: Iran_GanjDareh_N Greece_Minoan_Lassithi 1.390
gendstat: Iran_GanjDareh_N Russia_MLBA_Sintashta_published 1.449
gendstat: Georgia_Kotias.SG Turkey_N_published -0.202
gendstat: Georgia_Kotias.SG Russia_MA1_HG.SG 0.356
gendstat: Georgia_Kotias.SG Georgia_Satsurblia.SG -0.207
gendstat: Georgia_Kotias.SG Papuan.DG 0.927
gendstat: Georgia_Kotias.SG Israel_Natufian_published 0.085
gendstat: Georgia_Kotias.SG Russia_DevilsCave_N.SG 0.582
gendstat: Georgia_Kotias.SG ONG.SG 0.212
gendstat: Georgia_Kotias.SG Greece_Minoan_Lassithi 0.695
gendstat: Georgia_Kotias.SG Russia_MLBA_Sintashta_published 1.135
gendstat: Turkey_N_published Russia_MA1_HG.SG 0.658
gendstat: Turkey_N_published Georgia_Satsurblia.SG -0.041
gendstat: Turkey_N_published Papuan.DG 1.635
gendstat: Turkey_N_published Israel_Natufian_published 0.247
gendstat: Turkey_N_published Russia_DevilsCave_N.SG 1.071
gendstat: Turkey_N_published ONG.SG 0.602
gendstat: Turkey_N_published Greece_Minoan_Lassithi 1.512
gendstat: Turkey_N_published Russia_MLBA_Sintashta_published 1.493
gendstat: Russia_MA1_HG.SG Georgia_Satsurblia.SG -0.552
gendstat: Russia_MA1_HG.SG Papuan.DG 0.663
gendstat: Russia_MA1_HG.SG Israel_Natufian_published -0.198
gendstat: Russia_MA1_HG.SG Russia_DevilsCave_N.SG 0.171
gendstat: Russia_MA1_HG.SG ONG.SG -0.220
gendstat: Russia_MA1_HG.SG Greece_Minoan_Lassithi 0.290
gendstat: Russia_MA1_HG.SG Russia_MLBA_Sintashta_published 0.839
gendstat: Georgia_Satsurblia.SG Papuan.DG 1.262
gendstat: Georgia_Satsurblia.SG Israel_Natufian_published 0.244
gendstat: Georgia_Satsurblia.SG Russia_DevilsCave_N.SG 0.813
gendstat: Georgia_Satsurblia.SG ONG.SG 0.436
gendstat: Georgia_Satsurblia.SG Greece_Minoan_Lassithi 0.934
gendstat: Georgia_Satsurblia.SG Russia_MLBA_Sintashta_published 1.282
gendstat: Papuan.DG Israel_Natufian_published -0.718
gendstat: Papuan.DG Russia_DevilsCave_N.SG -0.637
gendstat: Papuan.DG ONG.SG -1.278
gendstat: Papuan.DG Greece_Minoan_Lassithi -0.483
gendstat: Papuan.DG Russia_MLBA_Sintashta_published 0.389
gendstat: Israel_Natufian_published Russia_DevilsCave_N.SG 0.330
gendstat: Israel_Natufian_published ONG.SG 0.063
gendstat: Israel_Natufian_published Greece_Minoan_Lassithi 0.424
gendstat: Israel_Natufian_published Russia_MLBA_Sintashta_published 0.856
gendstat: Russia_DevilsCave_N.SG ONG.SG -0.576
gendstat: Russia_DevilsCave_N.SG Greece_Minoan_Lassithi 0.130
gendstat: Russia_DevilsCave_N.SG Russia_MLBA_Sintashta_published 0.764
gendstat: ONG.SG Greece_Minoan_Lassithi 0.659
gendstat: ONG.SG Russia_MLBA_Sintashta_published 1.114
gendstat: Greece_Minoan_Lassithi Russia_MLBA_Sintashta_published 0.714

##end of qpAdm: 2.330 seconds cpu 0.827 Mbytes in use
kingmob
02-03-2022, 10:59 AM
4) 47.7% Spain_Greek_oAegean (Greek colony Emporion) + 52.3% Iran_IA_HajjiFiruz.





qpAdm: parameter file: parqpadm.txt
### THE INPUT PARAMETERS
##PARAMETER NAME: VALUE
fstatsname: fstatsa.txt
popleft: left.txt
popright: right.txt
details: YES
## qpAdm version: 1520
seed: 1854115942
*** recommended that inbreed be explicitly set ***
inbreed set NO

left pops:
ponticgreek
Spain_Greek_oAegean
Iran_IA_HajjiFiruz

right pops:
Mbuti.DG
Russia_Ust_Ishim.DG
China_Tianyuan
Goyet_Neanderthal.SG
Iran_GanjDareh_N
Georgia_Kotias.SG
Turkey_N_published
Russia_MA1_HG.SG
Georgia_Satsurblia.SG
Papuan.DG
Israel_Natufian_published
Russia_DevilsCave_N.SG
ONG.SG
Greece_Minoan_Lassithi
Russia_MLBA_Sintashta_published

codimension 1
f4info:
f4rank: 1 dof: 13 chisq: 12.466 tail: 0.489855912 dofdiff: 15 chisqdiff: -12.466 taildiff: 1
B:
scale 1.000
Russia_Ust_Ishim.DG 0.542
China_Tianyuan 0.168
Goyet_Neanderthal.SG 0.596
Iran_GanjDareh_N -1.408
Georgia_Kotias.SG -0.391
Turkey_N_published 2.086
Russia_MA1_HG.SG -0.021
Georgia_Satsurblia.SG -0.890
Papuan.DG -0.323
Israel_Natufian_published 1.155
Russia_DevilsCave_N.SG 0.138
ONG.SG -0.062
Greece_Minoan_Lassithi 2.007
Russia_MLBA_Sintashta_published 0.741
A:
scale 983.394
Spain_Greek_oAegean 1.045
Iran_IA_HajjiFiruz -0.952


full rank
f4info:
f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 13 chisqdiff: 12.466 taildiff: 0.489855912
B:
scale 827.359 782.519
Russia_Ust_Ishim.DG 0.336 -0.469
China_Tianyuan -0.142 -0.426
Goyet_Neanderthal.SG 0.297 -0.605
Iran_GanjDareh_N -1.785 0.520
Georgia_Kotias.SG -1.553 -0.906
Turkey_N_published 1.105 -2.340
Russia_MA1_HG.SG -0.458 -0.382
Georgia_Satsurblia.SG -1.906 -0.499
Papuan.DG -0.183 0.317
Israel_Natufian_published 0.437 -1.511
Russia_DevilsCave_N.SG 0.314 0.121
ONG.SG -0.365 -0.306
Greece_Minoan_Lassithi 1.379 -1.926
Russia_MLBA_Sintashta_published 0.870 -0.257
A:
scale 1.414 1.414
Spain_Greek_oAegean 1.414 0.000
Iran_IA_HajjiFiruz 0.000 1.414


best coefficients: 0.477 0.523
totmean: 0.477 0.523
boot mean: 0.476 0.524
std. errors: 0.063 0.063

error covariance (* 1,000,000)
4013 -4013
-4013 4013


summ: ponticgreek 2 0.489856 0.476 0.524 4013 -4013 4013

fixed pat wt dof chisq tail prob
00 0 13 12.466 0.489856 0.477 0.523
01 1 14 74.536 2.87862e-10 1.000 0.000
10 1 14 62.623 4.04714e-08 0.000 1.000
best pat: 00 0.489856 - -
best pat: 10 4.04714e-08 chi(nested): 50.157 p-value for nested model: 1.41916e-12

coeffs: 0.477 0.523

## dscore:: f_4(Base, Fit, Rbase, right2)
## genstat:: f_4(Base, Fit, right1, right2)

details: Spain_Greek_oAegean Russia_Ust_Ishim.DG 0.000406 0.619373
details: Iran_IA_HajjiFiruz Russia_Ust_Ishim.DG -0.000600 -0.852880
dscore: Russia_Ust_Ishim.DG f4: -0.000120 Z: -0.199077

details: Spain_Greek_oAegean China_Tianyuan -0.000172 -0.226183
details: Iran_IA_HajjiFiruz China_Tianyuan -0.000545 -0.664054
dscore: China_Tianyuan f4: -0.000367 Z: -0.514665

details: Spain_Greek_oAegean Goyet_Neanderthal.SG 0.000358 0.638746
details: Iran_IA_HajjiFiruz Goyet_Neanderthal.SG -0.000773 -1.253818
dscore: Goyet_Neanderthal.SG f4: -0.000233 Z: -0.439885

details: Spain_Greek_oAegean Iran_GanjDareh_N -0.002158 -4.243398
details: Iran_IA_HajjiFiruz Iran_GanjDareh_N 0.000665 1.139512
dscore: Iran_GanjDareh_N f4: -0.000681 Z: -1.392116

details: Spain_Greek_oAegean Georgia_Kotias.SG -0.001878 -2.286316
details: Iran_IA_HajjiFiruz Georgia_Kotias.SG -0.001158 -1.323572
dscore: Georgia_Kotias.SG f4: -0.001501 Z: -1.940992

details: Spain_Greek_oAegean Turkey_N_published 0.001335 2.442577
details: Iran_IA_HajjiFiruz Turkey_N_published -0.002990 -5.114645
dscore: Turkey_N_published f4: -0.000928 Z: -1.818599

details: Spain_Greek_oAegean Russia_MA1_HG.SG -0.000554 -0.677439
details: Iran_IA_HajjiFiruz Russia_MA1_HG.SG -0.000488 -0.548583
dscore: Russia_MA1_HG.SG f4: -0.000520 Z: -0.672959

details: Spain_Greek_oAegean Georgia_Satsurblia.SG -0.002304 -2.876785
details: Iran_IA_HajjiFiruz Georgia_Satsurblia.SG -0.000638 -0.759741
dscore: Georgia_Satsurblia.SG f4: -0.001432 Z: -1.944769

details: Spain_Greek_oAegean Papuan.DG -0.000221 -0.397523
details: Iran_IA_HajjiFiruz Papuan.DG 0.000405 0.679329
dscore: Papuan.DG f4: 0.000107 Z: 0.209151

details: Spain_Greek_oAegean Israel_Natufian_published 0.000528 0.484592
details: Iran_IA_HajjiFiruz Israel_Natufian_published -0.001931 -1.733263
dscore: Israel_Natufian_published f4: -0.000759 Z: -0.756345

details: Spain_Greek_oAegean Russia_DevilsCave_N.SG 0.000379 0.614504
details: Iran_IA_HajjiFiruz Russia_DevilsCave_N.SG 0.000155 0.239127
dscore: Russia_DevilsCave_N.SG f4: 0.000262 Z: 0.464356

details: Spain_Greek_oAegean ONG.SG -0.000441 -0.795420
details: Iran_IA_HajjiFiruz ONG.SG -0.000391 -0.645299
dscore: ONG.SG f4: -0.000415 Z: -0.792028

details: Spain_Greek_oAegean Greece_Minoan_Lassithi 0.001667 2.875739
details: Iran_IA_HajjiFiruz Greece_Minoan_Lassithi -0.002462 -3.976533
dscore: Greece_Minoan_Lassithi f4: -0.000493 Z: -0.914220

details: Spain_Greek_oAegean Russia_MLBA_Sintashta_published 0.001052 1.042298
details: Iran_IA_HajjiFiruz Russia_MLBA_Sintashta_published -0.000329 -0.304095
dscore: Russia_MLBA_Sintashta_published f4: 0.000330 Z: 0.346514

gendstat: Mbuti.DG Russia_Ust_Ishim.DG -0.199
gendstat: Mbuti.DG China_Tianyuan -0.515
gendstat: Mbuti.DG Goyet_Neanderthal.SG -0.440
gendstat: Mbuti.DG Iran_GanjDareh_N -1.392
gendstat: Mbuti.DG Georgia_Kotias.SG -1.941
gendstat: Mbuti.DG Turkey_N_published -1.819
gendstat: Mbuti.DG Russia_MA1_HG.SG -0.673
gendstat: Mbuti.DG Georgia_Satsurblia.SG -1.945
gendstat: Mbuti.DG Papuan.DG 0.209
gendstat: Mbuti.DG Israel_Natufian_published -0.756
gendstat: Mbuti.DG Russia_DevilsCave_N.SG 0.464
gendstat: Mbuti.DG ONG.SG -0.792
gendstat: Mbuti.DG Greece_Minoan_Lassithi -0.914
gendstat: Mbuti.DG Russia_MLBA_Sintashta_published 0.347
gendstat: Russia_Ust_Ishim.DG China_Tianyuan -0.325
gendstat: Russia_Ust_Ishim.DG Goyet_Neanderthal.SG -0.150
gendstat: Russia_Ust_Ishim.DG Iran_GanjDareh_N -0.882
gendstat: Russia_Ust_Ishim.DG Georgia_Kotias.SG -1.604
gendstat: Russia_Ust_Ishim.DG Turkey_N_published -1.297
gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG -0.515
gendstat: Russia_Ust_Ishim.DG Georgia_Satsurblia.SG -1.538
gendstat: Russia_Ust_Ishim.DG Papuan.DG 0.358
gendstat: Russia_Ust_Ishim.DG Israel_Natufian_published -0.599
gendstat: Russia_Ust_Ishim.DG Russia_DevilsCave_N.SG 0.571
gendstat: Russia_Ust_Ishim.DG ONG.SG -0.477
gendstat: Russia_Ust_Ishim.DG Greece_Minoan_Lassithi -0.558
gendstat: Russia_Ust_Ishim.DG Russia_MLBA_Sintashta_published 0.451
gendstat: China_Tianyuan Goyet_Neanderthal.SG 0.155
gendstat: China_Tianyuan Iran_GanjDareh_N -0.433
gendstat: China_Tianyuan Georgia_Kotias.SG -1.271
gendstat: China_Tianyuan Turkey_N_published -0.797
gendstat: China_Tianyuan Russia_MA1_HG.SG -0.170
gendstat: China_Tianyuan Georgia_Satsurblia.SG -1.143
gendstat: China_Tianyuan Papuan.DG 0.657
gendstat: China_Tianyuan Israel_Natufian_published -0.341
gendstat: China_Tianyuan Russia_DevilsCave_N.SG 0.894
gendstat: China_Tianyuan ONG.SG -0.068
gendstat: China_Tianyuan Greece_Minoan_Lassithi -0.161
gendstat: China_Tianyuan Russia_MLBA_Sintashta_published 0.674
gendstat: Goyet_Neanderthal.SG Iran_GanjDareh_N -0.644
gendstat: Goyet_Neanderthal.SG Georgia_Kotias.SG -1.332
gendstat: Goyet_Neanderthal.SG Turkey_N_published -0.990
gendstat: Goyet_Neanderthal.SG Russia_MA1_HG.SG -0.318
gendstat: Goyet_Neanderthal.SG Georgia_Satsurblia.SG -1.357
gendstat: Goyet_Neanderthal.SG Papuan.DG 0.503
gendstat: Goyet_Neanderthal.SG Israel_Natufian_published -0.479
gendstat: Goyet_Neanderthal.SG Russia_DevilsCave_N.SG 0.654
gendstat: Goyet_Neanderthal.SG ONG.SG -0.264
gendstat: Goyet_Neanderthal.SG Greece_Minoan_Lassithi -0.358
gendstat: Goyet_Neanderthal.SG Russia_MLBA_Sintashta_published 0.524
gendstat: Iran_GanjDareh_N Georgia_Kotias.SG -1.129
gendstat: Iran_GanjDareh_N Turkey_N_published -0.506
gendstat: Iran_GanjDareh_N Russia_MA1_HG.SG 0.216
gendstat: Iran_GanjDareh_N Georgia_Satsurblia.SG -1.028
gendstat: Iran_GanjDareh_N Papuan.DG 1.404
gendstat: Iran_GanjDareh_N Israel_Natufian_published -0.076
gendstat: Iran_GanjDareh_N Russia_DevilsCave_N.SG 1.624
gendstat: Iran_GanjDareh_N ONG.SG 0.491
gendstat: Iran_GanjDareh_N Greece_Minoan_Lassithi 0.369
gendstat: Iran_GanjDareh_N Russia_MLBA_Sintashta_published 1.076
gendstat: Georgia_Kotias.SG Turkey_N_published 0.789
gendstat: Georgia_Kotias.SG Russia_MA1_HG.SG 1.072
gendstat: Georgia_Kotias.SG Georgia_Satsurblia.SG 0.078
gendstat: Georgia_Kotias.SG Papuan.DG 1.867
gendstat: Georgia_Kotias.SG Israel_Natufian_published 0.623
gendstat: Georgia_Kotias.SG Russia_DevilsCave_N.SG 2.301
gendstat: Georgia_Kotias.SG ONG.SG 1.434
gendstat: Georgia_Kotias.SG Greece_Minoan_Lassithi 1.309
gendstat: Georgia_Kotias.SG Russia_MLBA_Sintashta_published 1.721
gendstat: Turkey_N_published Russia_MA1_HG.SG 0.541
gendstat: Turkey_N_published Georgia_Satsurblia.SG -0.675
gendstat: Turkey_N_published Papuan.DG 1.797
gendstat: Turkey_N_published Israel_Natufian_published 0.171
gendstat: Turkey_N_published Russia_DevilsCave_N.SG 2.043
gendstat: Turkey_N_published ONG.SG 0.965
gendstat: Turkey_N_published Greece_Minoan_Lassithi 0.949
gendstat: Turkey_N_published Russia_MLBA_Sintashta_published 1.396
gendstat: Russia_MA1_HG.SG Georgia_Satsurblia.SG -0.958
gendstat: Russia_MA1_HG.SG Papuan.DG 0.807
gendstat: Russia_MA1_HG.SG Israel_Natufian_published -0.211
gendstat: Russia_MA1_HG.SG Russia_DevilsCave_N.SG 0.979
gendstat: Russia_MA1_HG.SG ONG.SG 0.141
gendstat: Russia_MA1_HG.SG Greece_Minoan_Lassithi 0.034
gendstat: Russia_MA1_HG.SG Russia_MLBA_Sintashta_published 0.780
gendstat: Georgia_Satsurblia.SG Papuan.DG 1.922
gendstat: Georgia_Satsurblia.SG Israel_Natufian_published 0.589
gendstat: Georgia_Satsurblia.SG Russia_DevilsCave_N.SG 2.073
gendstat: Georgia_Satsurblia.SG ONG.SG 1.268
gendstat: Georgia_Satsurblia.SG Greece_Minoan_Lassithi 1.224
gendstat: Georgia_Satsurblia.SG Russia_MLBA_Sintashta_published 1.629
gendstat: Papuan.DG Israel_Natufian_published -0.861
gendstat: Papuan.DG Russia_DevilsCave_N.SG 0.269
gendstat: Papuan.DG ONG.SG -1.013
gendstat: Papuan.DG Greece_Minoan_Lassithi -1.015
gendstat: Papuan.DG Russia_MLBA_Sintashta_published 0.227
gendstat: Israel_Natufian_published Russia_DevilsCave_N.SG 0.947
gendstat: Israel_Natufian_published ONG.SG 0.334
gendstat: Israel_Natufian_published Greece_Minoan_Lassithi 0.260
gendstat: Israel_Natufian_published Russia_MLBA_Sintashta_published 0.850
gendstat: Russia_DevilsCave_N.SG ONG.SG -1.294
gendstat: Russia_DevilsCave_N.SG Greece_Minoan_Lassithi -1.175
gendstat: Russia_DevilsCave_N.SG Russia_MLBA_Sintashta_published 0.069
gendstat: ONG.SG Greece_Minoan_Lassithi -0.136
gendstat: ONG.SG Russia_MLBA_Sintashta_published 0.799
gendstat: Greece_Minoan_Lassithi Russia_MLBA_Sintashta_published 0.870

##end of qpAdm: 2.358 seconds cpu 0.827 Mbytes in use




https://mithridatescenter.com/wp-content/uploads/2020/06/Mithridates-the-Great.jpg
kingmob
02-04-2022, 01:38 PM
5) 39.5% Greece_Minoan_Lassithi + 60.5% Iran_IA_HajjiFiruz.





qpAdm: parameter file: parqpadm.txt
### THE INPUT PARAMETERS
##PARAMETER NAME: VALUE
fstatsname: fstatsa.txt
popleft: left.txt
popright: right.txt
details: YES
## qpAdm version: 1520
seed: 1862434294
*** recommended that inbreed be explicitly set ***
inbreed set NO

left pops:
ponticgreek
Greece_Minoan_Lassithi
Iran_IA_HajjiFiruz

right pops:
Mbuti.DG
Russia_Ust_Ishim.DG
China_Tianyuan
Goyet_Neanderthal.SG
Iran_GanjDareh_N
Georgia_Kotias.SG
Turkey_N_published
Russia_MA1_HG.SG
Georgia_Satsurblia.SG
Papuan.DG
Israel_Natufian_published
Russia_DevilsCave_N.SG
ONG.SG
Russia_MLBA_Sintashta_published

codimension 1
f4info:
f4rank: 1 dof: 12 chisq: 12.000 tail: 0.445665393 dofdiff: 14 chisqdiff: -12.000 taildiff: 1
B:
scale 1.000
Russia_Ust_Ishim.DG 0.305
China_Tianyuan -0.368
Goyet_Neanderthal.SG 0.095
Iran_GanjDareh_N -1.362
Georgia_Kotias.SG -0.689
Turkey_N_published 2.432
Russia_MA1_HG.SG -0.506
Georgia_Satsurblia.SG -0.861
Papuan.DG -0.218
Israel_Natufian_published 1.707
Russia_DevilsCave_N.SG -0.277
ONG.SG -0.451
Russia_MLBA_Sintashta_published 0.529
A:
scale 888.863
Greece_Minoan_Lassithi 1.184
Iran_IA_HajjiFiruz -0.773


full rank
f4info:
f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 12 chisqdiff: 12.000 taildiff: 0.445665393
B:
scale 644.644 890.022
Russia_Ust_Ishim.DG 0.036 -0.542
China_Tianyuan -0.725 -0.485
Goyet_Neanderthal.SG -0.199 -0.529
Iran_GanjDareh_N -1.478 0.486
Georgia_Kotias.SG -1.428 -1.099
Turkey_N_published 1.644 -2.680
Russia_MA1_HG.SG -0.903 -0.489
Georgia_Satsurblia.SG -1.318 -0.641
Papuan.DG -0.046 0.357
Israel_Natufian_published 1.471 -1.559
Russia_DevilsCave_N.SG -0.266 0.143
ONG.SG -0.729 -0.379
Russia_MLBA_Sintashta_published 0.439 -0.436
A:
scale 1.414 1.414
Greece_Minoan_Lassithi 1.414 0.000
Iran_IA_HajjiFiruz 0.000 1.414


best coefficients: 0.395 0.605
totmean: 0.395 0.605
boot mean: 0.394 0.606
std. errors: 0.056 0.056

error covariance (* 1,000,000)
3188 -3188
-3188 3188


summ: ponticgreek 2 0.445665 0.394 0.606 3188 -3188 3188

fixed pat wt dof chisq tail prob
00 0 12 12.000 0.445665 0.395 0.605
01 1 13 137.550 6.51198e-23 1.000 0.000
10 1 13 52.966 9.16187e-07 0.000 1.000
best pat: 00 0.445665 - -
best pat: 10 9.16187e-07 chi(nested): 40.966 p-value for nested model: 1.5494e-10

coeffs: 0.395 0.605

## dscore:: f_4(Base, Fit, Rbase, right2)
## genstat:: f_4(Base, Fit, right1, right2)

details: Greece_Minoan_Lassithi Russia_Ust_Ishim.DG 0.000056 0.096589
details: Iran_IA_HajjiFiruz Russia_Ust_Ishim.DG -0.000609 -0.864922
dscore: Russia_Ust_Ishim.DG f4: -0.000346 Z: -0.571924

details: Greece_Minoan_Lassithi China_Tianyuan -0.001124 -1.670529
details: Iran_IA_HajjiFiruz China_Tianyuan -0.000545 -0.663209
dscore: China_Tianyuan f4: -0.000774 Z: -1.090014

details: Greece_Minoan_Lassithi Goyet_Neanderthal.SG -0.000309 -0.592215
details: Iran_IA_HajjiFiruz Goyet_Neanderthal.SG -0.000595 -0.957888
dscore: Goyet_Neanderthal.SG f4: -0.000482 Z: -0.888341

details: Greece_Minoan_Lassithi Iran_GanjDareh_N -0.002292 -4.786997
details: Iran_IA_HajjiFiruz Iran_GanjDareh_N 0.000547 0.934130
dscore: Iran_GanjDareh_N f4: -0.000574 Z: -1.144436

details: Greece_Minoan_Lassithi Georgia_Kotias.SG -0.002215 -3.159629
details: Iran_IA_HajjiFiruz Georgia_Kotias.SG -0.001235 -1.407331
dscore: Georgia_Kotias.SG f4: -0.001622 Z: -2.139138

details: Greece_Minoan_Lassithi Turkey_N_published 0.002550 5.333047
details: Iran_IA_HajjiFiruz Turkey_N_published -0.003012 -5.155779
dscore: Turkey_N_published f4: -0.000816 Z: -1.627959

details: Greece_Minoan_Lassithi Russia_MA1_HG.SG -0.001400 -1.932343
details: Iran_IA_HajjiFiruz Russia_MA1_HG.SG -0.000550 -0.610729
dscore: Russia_MA1_HG.SG f4: -0.000886 Z: -1.150826

details: Greece_Minoan_Lassithi Georgia_Satsurblia.SG -0.002044 -2.860545
details: Iran_IA_HajjiFiruz Georgia_Satsurblia.SG -0.000720 -0.859757
dscore: Georgia_Satsurblia.SG f4: -0.001243 Z: -1.700685

details: Greece_Minoan_Lassithi Papuan.DG -0.000071 -0.138388
details: Iran_IA_HajjiFiruz Papuan.DG 0.000401 0.671365
dscore: Papuan.DG f4: 0.000215 Z: 0.414398

details: Greece_Minoan_Lassithi Israel_Natufian_published 0.002281 2.268645
details: Iran_IA_HajjiFiruz Israel_Natufian_published -0.001751 -1.541073
dscore: Israel_Natufian_published f4: -0.000159 Z: -0.155881

details: Greece_Minoan_Lassithi Russia_DevilsCave_N.SG -0.000413 -0.786268
details: Iran_IA_HajjiFiruz Russia_DevilsCave_N.SG 0.000161 0.247614
dscore: Russia_DevilsCave_N.SG f4: -0.000066 Z: -0.118977

details: Greece_Minoan_Lassithi ONG.SG -0.001131 -2.308260
details: Iran_IA_HajjiFiruz ONG.SG -0.000426 -0.705353
dscore: ONG.SG f4: -0.000704 Z: -1.365035

details: Greece_Minoan_Lassithi Russia_MLBA_Sintashta_published 0.000680 0.721591
details: Iran_IA_HajjiFiruz Russia_MLBA_Sintashta_published -0.000489 -0.447910
dscore: Russia_MLBA_Sintashta_published f4: -0.000027 Z: -0.028377

gendstat: Mbuti.DG Russia_Ust_Ishim.DG -0.572
gendstat: Mbuti.DG China_Tianyuan -1.090
gendstat: Mbuti.DG Goyet_Neanderthal.SG -0.888
gendstat: Mbuti.DG Iran_GanjDareh_N -1.144
gendstat: Mbuti.DG Georgia_Kotias.SG -2.139
gendstat: Mbuti.DG Turkey_N_published -1.628
gendstat: Mbuti.DG Russia_MA1_HG.SG -1.151
gendstat: Mbuti.DG Georgia_Satsurblia.SG -1.701
gendstat: Mbuti.DG Papuan.DG 0.414
gendstat: Mbuti.DG Israel_Natufian_published -0.156
gendstat: Mbuti.DG Russia_DevilsCave_N.SG -0.119
gendstat: Mbuti.DG ONG.SG -1.365
gendstat: Mbuti.DG Russia_MLBA_Sintashta_published -0.028
gendstat: Russia_Ust_Ishim.DG China_Tianyuan -0.562
gendstat: Russia_Ust_Ishim.DG Goyet_Neanderthal.SG -0.179
gendstat: Russia_Ust_Ishim.DG Iran_GanjDareh_N -0.366
gendstat: Russia_Ust_Ishim.DG Georgia_Kotias.SG -1.510
gendstat: Russia_Ust_Ishim.DG Turkey_N_published -0.757
gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG -0.696
gendstat: Russia_Ust_Ishim.DG Georgia_Satsurblia.SG -1.054
gendstat: Russia_Ust_Ishim.DG Papuan.DG 0.911
gendstat: Russia_Ust_Ishim.DG Israel_Natufian_published 0.176
gendstat: Russia_Ust_Ishim.DG Russia_DevilsCave_N.SG 0.436
gendstat: Russia_Ust_Ishim.DG ONG.SG -0.603
gendstat: Russia_Ust_Ishim.DG Russia_MLBA_Sintashta_published 0.320
gendstat: China_Tianyuan Goyet_Neanderthal.SG 0.334
gendstat: China_Tianyuan Iran_GanjDareh_N 0.276
gendstat: China_Tianyuan Georgia_Kotias.SG -0.982
gendstat: China_Tianyuan Turkey_N_published -0.059
gendstat: China_Tianyuan Russia_MA1_HG.SG -0.124
gendstat: China_Tianyuan Georgia_Satsurblia.SG -0.516
gendstat: China_Tianyuan Papuan.DG 1.363
gendstat: China_Tianyuan Israel_Natufian_published 0.536
gendstat: China_Tianyuan Russia_DevilsCave_N.SG 1.027
gendstat: China_Tianyuan ONG.SG 0.099
gendstat: China_Tianyuan Russia_MLBA_Sintashta_published 0.709
gendstat: Goyet_Neanderthal.SG Iran_GanjDareh_N -0.130
gendstat: Goyet_Neanderthal.SG Georgia_Kotias.SG -1.212
gendstat: Goyet_Neanderthal.SG Turkey_N_published -0.476
gendstat: Goyet_Neanderthal.SG Russia_MA1_HG.SG -0.446
gendstat: Goyet_Neanderthal.SG Georgia_Satsurblia.SG -0.869
gendstat: Goyet_Neanderthal.SG Papuan.DG 1.019
gendstat: Goyet_Neanderthal.SG Israel_Natufian_published 0.289
gendstat: Goyet_Neanderthal.SG Russia_DevilsCave_N.SG 0.545
gendstat: Goyet_Neanderthal.SG ONG.SG -0.322
gendstat: Goyet_Neanderthal.SG Russia_MLBA_Sintashta_published 0.418
gendstat: Iran_GanjDareh_N Georgia_Kotias.SG -1.468
gendstat: Iran_GanjDareh_N Turkey_N_published -0.491
gendstat: Iran_GanjDareh_N Russia_MA1_HG.SG -0.419
gendstat: Iran_GanjDareh_N Georgia_Satsurblia.SG -0.936
gendstat: Iran_GanjDareh_N Papuan.DG 1.445
gendstat: Iran_GanjDareh_N Israel_Natufian_published 0.396
gendstat: Iran_GanjDareh_N Russia_DevilsCave_N.SG 0.884
gendstat: Iran_GanjDareh_N ONG.SG -0.239
gendstat: Iran_GanjDareh_N Russia_MLBA_Sintashta_published 0.577
gendstat: Georgia_Kotias.SG Turkey_N_published 1.138
gendstat: Georgia_Kotias.SG Russia_MA1_HG.SG 0.815
gendstat: Georgia_Kotias.SG Georgia_Satsurblia.SG 0.434
gendstat: Georgia_Kotias.SG Papuan.DG 2.198
gendstat: Georgia_Kotias.SG Israel_Natufian_published 1.215
gendstat: Georgia_Kotias.SG Russia_DevilsCave_N.SG 2.126
gendstat: Georgia_Kotias.SG ONG.SG 1.223
gendstat: Georgia_Kotias.SG Russia_MLBA_Sintashta_published 1.491
gendstat: Turkey_N_published Russia_MA1_HG.SG -0.093
gendstat: Turkey_N_published Georgia_Satsurblia.SG -0.596
gendstat: Turkey_N_published Papuan.DG 1.792
gendstat: Turkey_N_published Israel_Natufian_published 0.655
gendstat: Turkey_N_published Russia_DevilsCave_N.SG 1.305
gendstat: Turkey_N_published ONG.SG 0.208
gendstat: Turkey_N_published Russia_MLBA_Sintashta_published 0.872
gendstat: Russia_MA1_HG.SG Georgia_Satsurblia.SG -0.381
gendstat: Russia_MA1_HG.SG Papuan.DG 1.459
gendstat: Russia_MA1_HG.SG Israel_Natufian_published 0.630
gendstat: Russia_MA1_HG.SG Russia_DevilsCave_N.SG 1.042
gendstat: Russia_MA1_HG.SG ONG.SG 0.248
gendstat: Russia_MA1_HG.SG Russia_MLBA_Sintashta_published 0.792
gendstat: Georgia_Satsurblia.SG Papuan.DG 1.876
gendstat: Georgia_Satsurblia.SG Israel_Natufian_published 0.952
gendstat: Georgia_Satsurblia.SG Russia_DevilsCave_N.SG 1.485
gendstat: Georgia_Satsurblia.SG ONG.SG 0.693
gendstat: Georgia_Satsurblia.SG Russia_MLBA_Sintashta_published 1.142
gendstat: Papuan.DG Israel_Natufian_published -0.368
gendstat: Papuan.DG Russia_DevilsCave_N.SG -0.495
gendstat: Papuan.DG ONG.SG -1.826
gendstat: Papuan.DG Russia_MLBA_Sintashta_published -0.246
gendstat: Israel_Natufian_published Russia_DevilsCave_N.SG 0.086
gendstat: Israel_Natufian_published ONG.SG -0.527
gendstat: Israel_Natufian_published Russia_MLBA_Sintashta_published 0.101
gendstat: Russia_DevilsCave_N.SG ONG.SG -1.225
gendstat: Russia_DevilsCave_N.SG Russia_MLBA_Sintashta_published 0.040
gendstat: ONG.SG Russia_MLBA_Sintashta_published 0.713

##end of qpAdm: 2.098 seconds cpu 0.778 Mbytes in use
kingmob
02-10-2022, 09:52 AM
6) 52.5% Turkey_N.SG + 23.7% Russia_Samara_EBA_Yamnaya + 23.8% Georgia_Kotias.SG.




qpAdm: parameter file: parqpadm.txt
### THE INPUT PARAMETERS
##PARAMETER NAME: VALUE
fstatsname: fstatsa.txt
popleft: left.txt
popright: right.txt
details: YES
## qpAdm version: 1520
seed: 1814158772
*** recommended that inbreed be explicitly set ***
inbreed set NO

left pops:
ponticgreek
Turkey_N.SG
Russia_Samara_EBA_Yamnaya
Georgia_Kotias.SG

right pops:
Mbuti.DG
Russia_Ust_Ishim.DG
China_Tianyuan
Goyet_Neanderthal.SG
Russia_Sunghir3.SG
Russia_Kostenki14.SG
Russia_MA1_HG.SG
Georgia_Satsurblia.SG
Russia_DevilsCave_N.SG
Papuan.DG
Switzerland_Bichon.SG
Israel_Natufian_published
Russia_Steppe_Eneolithic
ONG.SG

codimension 1
f4info:
f4rank: 2 dof: 11 chisq: 11.900 tail: 0.371173996 dofdiff: 13 chisqdiff: -11.900 taildiff: 1
B:
scale 1.000 1.000
Russia_Ust_Ishim.DG 0.083 0.454
China_Tianyuan 0.438 0.699
Goyet_Neanderthal.SG -0.046 0.070
Russia_Sunghir3.SG -0.109 0.652
Russia_Kostenki14.SG -0.014 0.698
Russia_MA1_HG.SG 1.118 2.000
Georgia_Satsurblia.SG 2.455 -1.615
Russia_DevilsCave_N.SG 0.530 0.468
Papuan.DG 0.338 0.563
Switzerland_Bichon.SG -0.154 1.433
Israel_Natufian_published -1.654 0.127
Russia_Steppe_Eneolithic 1.511 1.377
ONG.SG 0.272 0.526
A:
scale 526.431 611.157
Turkey_N.SG -0.901 -0.126
Russia_Samara_EBA_Yamnaya 0.678 1.357
Georgia_Kotias.SG 1.314 -1.070


full rank
f4info:
f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 11 chisqdiff: 11.900 taildiff: 0.371173996
B:
scale 633.248 343.760 322.607
Russia_Ust_Ishim.DG 0.310 0.637 0.078
China_Tianyuan -0.809 0.620 -0.148
Goyet_Neanderthal.SG 0.032 0.034 -0.081
Russia_Sunghir3.SG 0.272 0.572 -0.326
Russia_Kostenki14.SG 0.639 0.900 -0.042
Russia_MA1_HG.SG -1.298 2.087 -0.140
Georgia_Satsurblia.SG -2.153 -0.003 3.000
Russia_DevilsCave_N.SG -0.601 0.628 0.188
Papuan.DG -0.495 0.546 -0.077
Switzerland_Bichon.SG 0.608 1.347 -0.596
Israel_Natufian_published 0.985 -1.023 -1.791
Russia_Steppe_Eneolithic -1.784 1.726 0.456
ONG.SG -0.563 0.425 -0.166
A:
scale 1.732 1.732 1.732
Turkey_N.SG 1.732 0.000 0.000
Russia_Samara_EBA_Yamnaya 0.000 1.732 0.000
Georgia_Kotias.SG 0.000 0.000 1.732


best coefficients: 0.525 0.237 0.238
totmean: 0.525 0.237 0.238
boot mean: 0.526 0.236 0.238
std. errors: 0.049 0.057 0.046

error covariance (* 1,000,000)
2363 -1764 -598
-1764 3253 -1489
-598 -1489 2087


summ: ponticgreek 3 0.371174 0.526 0.236 0.238 2363 -1764 -598 3253 -1489 ...
2087

fixed pat wt dof chisq tail prob
000 0 11 11.900 0.371174 0.525 0.237 0.238
001 1 12 38.229 0.000140862 0.613 0.387 0.000
010 1 12 28.746 0.00429604 0.648 0.000 0.352
100 1 12 120.162 5.73645e-20 0.000 0.573 0.427
011 2 13 97.536 4.97194e-15 1.000 0.000 0.000
101 2 13 185.734 0 0.000 1.000 0.000
110 2 13 189.645 0 0.000 0.000 1.000
best pat: 000 0.371174 - -
best pat: 010 0.00429604 chi(nested): 16.846 p-value for nested model: 4.05377e-05
best pat: 011 4.97194e-15 chi(nested): 68.790 p-value for nested model: 1.09531e-16

coeffs: 0.525 0.237 0.238

## dscore:: f_4(Base, Fit, Rbase, right2)
## genstat:: f_4(Base, Fit, right1, right2)

details: Turkey_N.SG Russia_Ust_Ishim.DG 0.000489 0.892999
details: Russia_Samara_EBA_Yamnaya Russia_Ust_Ishim.DG 0.001852 3.335823
details: Georgia_Kotias.SG Russia_Ust_Ishim.DG 0.000241 0.359719
dscore: Russia_Ust_Ishim.DG f4: 0.000753 Z: 1.436939

details: Turkey_N.SG China_Tianyuan -0.001277 -1.945857
details: Russia_Samara_EBA_Yamnaya China_Tianyuan 0.001803 2.777371
details: Georgia_Kotias.SG China_Tianyuan -0.000460 -0.590784
dscore: China_Tianyuan f4: -0.000354 Z: -0.564362

details: Turkey_N.SG Goyet_Neanderthal.SG 0.000050 0.104246
details: Russia_Samara_EBA_Yamnaya Goyet_Neanderthal.SG 0.000099 0.208239
details: Georgia_Kotias.SG Goyet_Neanderthal.SG -0.000253 -0.467505
dscore: Goyet_Neanderthal.SG f4: -0.000010 Z: -0.022178

details: Turkey_N.SG Russia_Sunghir3.SG 0.000430 0.660258
details: Russia_Samara_EBA_Yamnaya Russia_Sunghir3.SG 0.001664 2.673122
details: Georgia_Kotias.SG Russia_Sunghir3.SG -0.001009 -1.346145
dscore: Russia_Sunghir3.SG f4: 0.000379 Z: 0.627087

details: Turkey_N.SG Russia_Kostenki14.SG 0.001010 1.525219
details: Russia_Samara_EBA_Yamnaya Russia_Kostenki14.SG 0.002619 4.093545
details: Georgia_Kotias.SG Russia_Kostenki14.SG -0.000129 -0.170720
dscore: Russia_Kostenki14.SG f4: 0.001119 Z: 1.800353

details: Turkey_N.SG Russia_MA1_HG.SG -0.002051 -2.886625
details: Russia_Samara_EBA_Yamnaya Russia_MA1_HG.SG 0.006072 8.944278
details: Georgia_Kotias.SG Russia_MA1_HG.SG -0.000435 -0.520243
dscore: Russia_MA1_HG.SG f4: 0.000256 Z: 0.384488

details: Turkey_N.SG Georgia_Satsurblia.SG -0.003399 -4.869710
details: Russia_Samara_EBA_Yamnaya Georgia_Satsurblia.SG -0.000007 -0.011099
details: Georgia_Kotias.SG Georgia_Satsurblia.SG 0.009298 10.637279
dscore: Georgia_Satsurblia.SG f4: 0.000427 Z: 0.646702

details: Turkey_N.SG Russia_DevilsCave_N.SG -0.000949 -1.845972
details: Russia_Samara_EBA_Yamnaya Russia_DevilsCave_N.SG 0.001826 3.577952
details: Georgia_Kotias.SG Russia_DevilsCave_N.SG 0.000584 0.948199
dscore: Russia_DevilsCave_N.SG f4: 0.000073 Z: 0.149752

details: Turkey_N.SG Papuan.DG -0.000781 -1.602551
details: Russia_Samara_EBA_Yamnaya Papuan.DG 0.001587 3.351028
details: Georgia_Kotias.SG Papuan.DG -0.000238 -0.411457
dscore: Papuan.DG f4: -0.000092 Z: -0.199439

details: Turkey_N.SG Switzerland_Bichon.SG 0.000960 1.394244
details: Russia_Samara_EBA_Yamnaya Switzerland_Bichon.SG 0.003919 5.959414
details: Georgia_Kotias.SG Switzerland_Bichon.SG -0.001849 -2.359697
dscore: Switzerland_Bichon.SG f4: 0.000991 Z: 1.548841

details: Turkey_N.SG Israel_Natufian_published 0.001556 1.545646
details: Russia_Samara_EBA_Yamnaya Israel_Natufian_published -0.002977 -3.097959
details: Georgia_Kotias.SG Israel_Natufian_published -0.005551 -5.068579
dscore: Israel_Natufian_published f4: -0.001209 Z: -1.254594

details: Turkey_N.SG Russia_Steppe_Eneolithic -0.002818 -5.646308
details: Russia_Samara_EBA_Yamnaya Russia_Steppe_Eneolithic 0.005022 10.128670
details: Georgia_Kotias.SG Russia_Steppe_Eneolithic 0.001412 2.312972
dscore: Russia_Steppe_Eneolithic f4: 0.000044 Z: 0.093330

details: Turkey_N.SG ONG.SG -0.000889 -1.813269
details: Russia_Samara_EBA_Yamnaya ONG.SG 0.001237 2.607239
details: Georgia_Kotias.SG ONG.SG -0.000513 -0.899240
dscore: ONG.SG f4: -0.000297 Z: -0.648408

gendstat: Mbuti.DG Russia_Ust_Ishim.DG 1.437
gendstat: Mbuti.DG China_Tianyuan -0.564
gendstat: Mbuti.DG Goyet_Neanderthal.SG -0.022
gendstat: Mbuti.DG Russia_Sunghir3.SG 0.627
gendstat: Mbuti.DG Russia_Kostenki14.SG 1.800
gendstat: Mbuti.DG Russia_MA1_HG.SG 0.384
gendstat: Mbuti.DG Georgia_Satsurblia.SG 0.647
gendstat: Mbuti.DG Russia_DevilsCave_N.SG 0.150
gendstat: Mbuti.DG Papuan.DG -0.199
gendstat: Mbuti.DG Switzerland_Bichon.SG 1.549
gendstat: Mbuti.DG Israel_Natufian_published -1.255
gendstat: Mbuti.DG Russia_Steppe_Eneolithic 0.093
gendstat: Mbuti.DG ONG.SG -0.648
gendstat: Russia_Ust_Ishim.DG China_Tianyuan -1.630
gendstat: Russia_Ust_Ishim.DG Goyet_Neanderthal.SG -1.156
gendstat: Russia_Ust_Ishim.DG Russia_Sunghir3.SG -0.583
gendstat: Russia_Ust_Ishim.DG Russia_Kostenki14.SG 0.560
gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG -0.727
gendstat: Russia_Ust_Ishim.DG Georgia_Satsurblia.SG -0.426
gendstat: Russia_Ust_Ishim.DG Russia_DevilsCave_N.SG -1.186
gendstat: Russia_Ust_Ishim.DG Papuan.DG -1.498
gendstat: Russia_Ust_Ishim.DG Switzerland_Bichon.SG 0.347
gendstat: Russia_Ust_Ishim.DG Israel_Natufian_published -1.959
gendstat: Russia_Ust_Ishim.DG Russia_Steppe_Eneolithic -1.254
gendstat: Russia_Ust_Ishim.DG ONG.SG -1.957
gendstat: China_Tianyuan Goyet_Neanderthal.SG 0.454
gendstat: China_Tianyuan Russia_Sunghir3.SG 0.938
gendstat: China_Tianyuan Russia_Kostenki14.SG 1.923
gendstat: China_Tianyuan Russia_MA1_HG.SG 0.774
gendstat: China_Tianyuan Georgia_Satsurblia.SG 0.953
gendstat: China_Tianyuan Russia_DevilsCave_N.SG 0.701
gendstat: China_Tianyuan Papuan.DG 0.416
gendstat: China_Tianyuan Switzerland_Bichon.SG 1.829
gendstat: China_Tianyuan Israel_Natufian_published -0.830
gendstat: China_Tianyuan Russia_Steppe_Eneolithic 0.622
gendstat: China_Tianyuan ONG.SG 0.093
gendstat: Goyet_Neanderthal.SG Russia_Sunghir3.SG 0.537
gendstat: Goyet_Neanderthal.SG Russia_Kostenki14.SG 1.491
gendstat: Goyet_Neanderthal.SG Russia_MA1_HG.SG 0.340
gendstat: Goyet_Neanderthal.SG Georgia_Satsurblia.SG 0.554
gendstat: Goyet_Neanderthal.SG Russia_DevilsCave_N.SG 0.128
gendstat: Goyet_Neanderthal.SG Papuan.DG -0.135
gendstat: Goyet_Neanderthal.SG Switzerland_Bichon.SG 1.273
gendstat: Goyet_Neanderthal.SG Israel_Natufian_published -1.177
gendstat: Goyet_Neanderthal.SG Russia_Steppe_Eneolithic 0.086
gendstat: Goyet_Neanderthal.SG ONG.SG -0.477
gendstat: Russia_Sunghir3.SG Russia_Kostenki14.SG 1.070
gendstat: Russia_Sunghir3.SG Russia_MA1_HG.SG -0.161
gendstat: Russia_Sunghir3.SG Georgia_Satsurblia.SG 0.060
gendstat: Russia_Sunghir3.SG Russia_DevilsCave_N.SG -0.469
gendstat: Russia_Sunghir3.SG Papuan.DG -0.750
gendstat: Russia_Sunghir3.SG Switzerland_Bichon.SG 0.862
gendstat: Russia_Sunghir3.SG Israel_Natufian_published -1.508
gendstat: Russia_Sunghir3.SG Russia_Steppe_Eneolithic -0.534
gendstat: Russia_Sunghir3.SG ONG.SG -1.088
gendstat: Russia_Kostenki14.SG Russia_MA1_HG.SG -1.129
gendstat: Russia_Kostenki14.SG Georgia_Satsurblia.SG -0.843
gendstat: Russia_Kostenki14.SG Russia_DevilsCave_N.SG -1.629
gendstat: Russia_Kostenki14.SG Papuan.DG -1.962
gendstat: Russia_Kostenki14.SG Switzerland_Bichon.SG -0.184
gendstat: Russia_Kostenki14.SG Israel_Natufian_published -2.166
gendstat: Russia_Kostenki14.SG Russia_Steppe_Eneolithic -1.770
gendstat: Russia_Kostenki14.SG ONG.SG -2.256
gendstat: Russia_MA1_HG.SG Georgia_Satsurblia.SG 0.205
gendstat: Russia_MA1_HG.SG Russia_DevilsCave_N.SG -0.263
gendstat: Russia_MA1_HG.SG Papuan.DG -0.505
gendstat: Russia_MA1_HG.SG Switzerland_Bichon.SG 0.963
gendstat: Russia_MA1_HG.SG Israel_Natufian_published -1.343
gendstat: Russia_MA1_HG.SG Russia_Steppe_Eneolithic -0.326
gendstat: Russia_MA1_HG.SG ONG.SG -0.824
gendstat: Georgia_Satsurblia.SG Russia_DevilsCave_N.SG -0.503
gendstat: Georgia_Satsurblia.SG Papuan.DG -0.714
gendstat: Georgia_Satsurblia.SG Switzerland_Bichon.SG 0.706
gendstat: Georgia_Satsurblia.SG Israel_Natufian_published -1.509
gendstat: Georgia_Satsurblia.SG Russia_Steppe_Eneolithic -0.566
gendstat: Georgia_Satsurblia.SG ONG.SG -0.997
gendstat: Russia_DevilsCave_N.SG Papuan.DG -0.331
gendstat: Russia_DevilsCave_N.SG Switzerland_Bichon.SG 1.396
gendstat: Russia_DevilsCave_N.SG Israel_Natufian_published -1.288
gendstat: Russia_DevilsCave_N.SG Russia_Steppe_Eneolithic -0.057
gendstat: Russia_DevilsCave_N.SG ONG.SG -0.794
gendstat: Papuan.DG Switzerland_Bichon.SG 1.610
gendstat: Papuan.DG Israel_Natufian_published -1.176
gendstat: Papuan.DG Russia_Steppe_Eneolithic 0.259
gendstat: Papuan.DG ONG.SG -0.456
gendstat: Switzerland_Bichon.SG Israel_Natufian_published -2.051
gendstat: Switzerland_Bichon.SG Russia_Steppe_Eneolithic -1.578
gendstat: Switzerland_Bichon.SG ONG.SG -1.982
gendstat: Israel_Natufian_published Russia_Steppe_Eneolithic 1.311
gendstat: Israel_Natufian_published ONG.SG 0.941
gendstat: Russia_Steppe_Eneolithic ONG.SG -0.682

##end of qpAdm: 7.248 seconds cpu 1.114 Mbytes in use