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View Full Version : Brother NOSHACOT pigmentation prediction



Flashball
07-28-2023, 01:01 AM
This is a (paid) tool developed by Андрей - Andrei
Link to his channel
https://www.youtube.com/@-andreiDNA/videos

Based on the Nebula genome file (combined + nebula genome browser)

We both have brown (or chestnut) hair and brown eyes (darker in his case, and lighter in my case)

Brother results:

Chromosome - Gene - SNP - number of light hair alleles
5-SLC45A2, rs28777 = 1
5-SLC45A2, rs16891982 =1
6-IRF4, rs12203592 = 0
6-IRF4, rs6906608 = 0
9-TYRP1, rs1408799 = 2
9-TYRP1, rs683 = 2
9-TYRP1, rs16929340 = 2
11-TPCN2, rs35264875 = 1
12-KITLG, rs12821256 = 0
15-OCA2, rs4778138 =1
15-OCA2, rs7495174 = 1
15-HERC2, rs12913832 = 1
15-HERC2, rs1129038 = 1
16-FANCA, rs12931267 = 0
16-MC1R, rs1805006 = 0
16-MC1R, rs1805007 = 0
16-MC1R, rs1805008 = 0
16-MC1R, rs1805009 = 0
16-MC1R, rs11547464 = 0

Chromosome - Gene - SNP - number of light eye alleles
5-SLC45A2, rs16891982 = 1
5-SLC45A2, rs28117 = 1
5-FBXL17, rs288139 =0
5-FBXL17, rs34424 = 0
6-IRF4, rs12203592 = 0
6-IRF4, rs6906608 = 0
9-TYRP1, rs1408799 = 2
9-TYRP1, rs683 = 2
9-TYRP1, rs16929340 = 2
11-TYR, rs1126809 = 0
11-TYR, rs1393350 = 0
11-TYR, rs10741305 = 1
12-KITLG, rs642742 = 2
14-SLC24A4, rs4900109 = 1
14-SLC24A4, rs12896399 = 1
14-SLC24A4, rs2402130 = 2
14-SLC24A4, rs8006358 = 0
15-OCA2, rs1800407 =0
15-OCA2, rs11852452 = 2
15-OCA2, rs8034072 = 2
15-OCA2, rs7178315 = 1
15-OCA2, rs4778199 = 1
15-OCA2, rs4778138 = 1
15-HERC2, rs12913832 = 1
15-HERC2, rs1129038 = 1
15-HERC2, rs11636232 = 1
15-SLC24A5, rs1426654 = 2
20-ASIP, rs1015362 = 2


Snp - Chromosome - Gene - Number of snub alleles
rs2493272 - 1 - PRDM16 - 1
rs2493292 - 1 - PRDM16 - 2
rs868688 - 1 - PRDM16 - 2
rs1438607 - 2 - PAX3 - 2
rs7559271 - 2 - PAX3 - 0
rs825537 - 2 - OSR1 - 1
rs6707044 - 2 - OSR1 - 0
rs851352 - 2 - OSR1 - 1
rs851320 - 2 - OSR1 - 2
rs1100942 - 2 - OSR1 - 2
rs3827760 - 2 - EDAR - 0
rs510605 - 3 - CACNA2D3 - 0
rs515920 - 3 - CACNA2D3 - 2
rs10510771 - 3 - CACNA2D3 - 0
rs10513546 - 3 - SCHIP1 - 1
rs33051 - 3 - SCHIP1 - 0
rs9790702 - 4 - LOC101927947 - 1
rs4696584 - 4 - DCHS2 - 1
rs11099953 - 4 - DCHS2 - 0
rs11721758 - 4 - DCHS2 - 1
rs625820 - 5 - COL23A1 - 2
rs745443 - 5 - intragenic - 0
rs17640804 - 7 - GLI3 - 2
rs4793422 - 17 - LINC02003 - 1
rs285696 - 19 - CHST8 - 0
rs3920540 - 20 - BMP2 - 2


Prediction results:

Eyecolor estimate :
Likelyhood Blue eyes = 2.16282 %
Likelyhood Blue eyes with Amber Center = 27.9333%
Likelyhood Green eyes = 26.994 %
Likelyhood Hazel eyes = 30.5364%
Likelyhood Brown eyes = 11.9229%
Likelyhood Dark Brown eyes = 0.450611%

Hair color Estimate:
Likelyhood of Red Hair -0.01%
Likelyhood of Blond Hair -0.00%
Likelyhood of Brown Hair -61.89%
Likelyhood of Black Hair - 38.10%


My results:

Chromosome - Gene - SNP - number of light hair alleles
5-SLC45A2, rs28777 = 1
5-SLC45A2, rs16891982 =1
6-IRF4, rs12203592 = 1
6-IRF4, rs6906608 = 0
9-TYRP1, rs1408799 = 2
9-TYRP1, rs683 = 2
9-TYRP1, rs16929340 = 2
11-TPCN2, rs35264875 = 1
12-KITLG, rs12821256 = 0
15-OCA2, rs4778138 = 1
15-OCA2, rs7495174 = 1
15-HERC2, rs12913832 = 0
15-HERC2, rs1129038 = 0
16-FANCA, rs12931267 = 0
16-MC1R, rs1805006 = 0
16-MC1R, rs1805007 = 0
16-MC1R, rs1805008 = 0
16-MC1R, rs1805009 = 0
16-MC1R, rs11547464 = 0

Chromosome - Gene - SNP - number of light eye alleles
5-SLC45A2, rs16891982 = 1
5-SLC45A2, rs28117 = 1
5-FBXL17, rs288139 =0
5-FBXL17, rs34424 = 0
6-IRF4, rs12203592 = 1
6-IRF4, rs6906608 = 0
9-TYRP1, rs1408799 = 2
9-TYRP1, rs683 = 2
9-TYRP1, rs16929340 = 2
11-TYR, rs1126809 = 0
11-TYR, rs1393350 = 0
11-TYR, rs10741305 = 1
12-KITLG, rs642742 = 0
14-SLC24A4, rs4900109 = 2
14-SLC24A4, rs12896399 = 2
14-SLC24A4, rs2402130 = 2
14-SLC24A4, rs8006358 = 1
15-OCA2, rs1800407 =0
15-OCA2, rs11852452 = 1
15-OCA2, rs8034072 = 1
15-OCA2, rs7178315 = 0
15-OCA2, rs4778199 = 1
15-OCA2, rs4778138 = 1
15-HERC2, rs12913832 = 0
15-HERC2, rs1129038 = 0
15-HERC2, rs11636232 = 0
15-SLC24A5, rs1426654 = 2
20-ASIP, rs1015362 = 2


Snp - Chromosome - Gene - Number of snub alleles
rs2493272 - 1 - PRDM16 - 1
rs2493292 - 1 - PRDM16 - 2
rs868688 - 1 - PRDM16 - 2
rs1438607 - 2 - PAX3 - 0
rs7559271 - 2 - PAX3 - 2
rs825537 - 2 - OSR1 - 2
rs6707044 - 2 - OSR1 - 0
rs851352 - 2 - OSR1 - 2
rs851320 - 2 - OSR1 - 2
rs1100942 - 2 - OSR1 - 2
rs3827760 - 2 - EDAR - 0
rs510605 - 3 - CACNA2D3 - 0
rs515920 - 3 - CACNA2D3 - 1
rs10510771 - 3 - CACNA2D3 - 0
rs10513546 - 3 - SCHIP1 - 1
rs33051 - 3 - SCHIP1 - 0
rs9790702 - 4 - LOC101927947 - 2
rs4696584 - 4 - DCHS2 - 2
rs11099953 - 4 - DCHS2 - 0
rs11721758 - 4 - DCHS2 - 1
rs625820 - 5 - COL23A1 - 2
rs745443 - 5 - intragenic - 1
rs17640804 - 7 - GLI3 - 2
rs4793422 - 17 - LINC02003 - 1
rs285696 - 19 - CHST8 - 0
rs3920540 - 20 - BMP2 - 2


Eyecolor estimate :
Likelyhood Blue eyes = 0.267168 %
Likelyhood Blue eyes with Amber Center = 2.51297%
Likelyhood Green eyes = 3.32282 %
Likelyhood Hazel eyes = 22.5521%
Likelyhood Brown eyes = 51.1585%
Likelyhood Dark Brown eyes = 20.1865%


Hair color Estimate:
Likelyhood of Red Hair -0.01%
Likelyhood of Blond Hair -0.00%
Likelyhood of Brown Hair -24.65%
Likelyhood of Black Hair - 75.34%

Flashball
07-31-2023, 10:14 AM
Eyecolor estimate :
Likelyhood Blue eyes = 0.267168 %
Likelyhood Blue eyes with Amber Center = 2.51297%
Likelyhood Green eyes = 3.32282 %
Likelyhood Hazel eyes = 22.5521%
Likelyhood Brown eyes = 51.1585%
Likelyhood Dark Brown eyes = 20.1865%

My eyes color
https://imagizer.imageshack.com/img922/8610/WOXNGh.png
https://imagizer.imageshack.com/img923/6594/EgRDb1.png

marco
08-02-2023, 02:50 PM
I think I did something similar for my son but all the predictions were wrong

Flashball
08-03-2023, 01:01 PM
I think I did something similar for my son but all the predictions were wrong

What do you think about mine?
This is the difference between the expressed part of the genome and the non-expressed part, the prediction (here based on several SNPs via a complete genome) of eye and hair color is not necessarily the expressed one.

marco
08-06-2023, 02:41 PM
What do you think about mine?
This is the difference between the expressed part of the genome and the non-expressed part, the prediction (here based on several SNPs via a complete genome) of eye and hair color is not necessarily the expressed one.

I would say your eye colour is close but for my son they had him at dark brown hair and dark brown eyes, but he has hazel eyes and reddish hair mixed with light brown. But according to the test I done he has a 0 percent chance of having red hair despite my wife's grandma being fully ginger

But like you said the prediction is not necessarily the expressed one

marco
08-06-2023, 04:15 PM
What do you think about mine?
This is the difference between the expressed part of the genome and the non-expressed part, the prediction (here based on several SNPs via a complete genome) of eye and hair color is not necessarily the expressed one.

I would say your eye colour is close but for my son they had him at dark brown hair and dark brown eyes, but he has hazel eyes and reddish hair mixed with light brown. But according to the test I done he has a 0 percent chance of having red hair despite my wife's grandma being fully ginger

But like you said the prediction is not necessarily the expressed one