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View Full Version : Metagenomic analysis of a blood stain from the French revolutionary Jean-Paul Marat (1743–1793)



Ajeje Brazorf
07-22-2024, 07:31 AM
https://www.sciencedirect.com/science/article/pii/S1567134820300411

• Ancient DNA sequencing allows retrieval of genomes from long-dead people and the pathogens infecting them.
• We retrieved genetic material from the blood-stained paper Jean-Paul Marat was annotating at the time of his assassination.
• This allowed us to shed light on Marat’s ancestry and cast doubt on many pathogens suggested as causing his skin condition.
• We hypothesise he suffered from fungal infection (seborrheic dermatitis), with likely secondary bacterial super-infection.
• To our knowledge, this represents the oldest successful retrieval of genetic material from cellulose paper.


The French revolutionary Jean-Paul Marat (1743–1793) was assassinated in 1793 in his bathtub, where he was trying to find relief from the debilitating skin disease he was suffering from. At the time of his death, Marat was annotating newspapers, which got stained with his blood and were subsequently preserved by his sister. We extracted and sequenced DNA from the blood stain and also from another section of the newspaper, which we used for comparison. Results from the human DNA sequence analyses were compatible with a heterogeneous ancestry of Marat, with his mother being of French origin and his father born in Sardinia. Metagenomic analyses of the non-human reads uncovered the presence of fungal, bacterial and low levels of viral DNA. Relying on the presence/absence of microbial species in the samples, we could cast doubt on several putative infectious agents that have been previously hypothesised as the cause of his condition but for which we detect not a single sequencing read. Conversely, some of the species we detect are uncommon as environmental contaminants and may represent plausible infective agents. Based on all the available evidence, we hypothesize that Marat may have suffered from a fungal infection (seborrheic dermatitis), possibly superinfected with bacterial opportunistic pathogens.

https://ars.els-cdn.com/content/image/1-s2.0-S1567134820300411-gr1_lrg.jpg

https://ars.els-cdn.com/content/image/1-s2.0-S1567134820300411-gr2_lrg.jpg

Ajeje Brazorf
07-22-2024, 07:32 AM
Distance to: Jean-Paul_Marat__AD_1743__Cov_9.38%
0.03811273 French_Auvergne:C_3
0.03847476 French_Occitanie:T_11
0.03859761 French_Alsace:A_24_2
0.03890480 German:German5
0.03916127 European:8327817131_R03C01
0.03936886 European:5434289105_R03C02
0.03974083 Germany_Lech_BellBeaker:I5520__BC_2300__Cov_23.47%
0.03987512 German:German66
0.03996303 Avar:MGS133
0.04004081 French_Occitanie:T_96
0.04004166 BelgianC:5434289074_R03C01
0.04004166 European:5434289074_R03C01
0.04012080 French_Nord:N_60_2
0.04015128 Czechia_LBA_Knoviz:I13783__BC_1072__Cov_69.75%
0.04041148 French_Nord:N_28
0.04058296 Germany_BellBeaker:I5529__BC_2300__Cov_38.55%
0.04086400 French_Sarthe:EXPL0120
0.04096562 French_Nord:N_96
0.04110617 French_Ardèche:EXPL0263
0.04143317 Germany_West-Hallstattkreis_EIA:LWB002__BC_475__Cov_14.52%
0.04150354 Fitis_father_scaled
0.04150354 French_Corrèze:EXPL0032
0.04154290 French_Alsace:A_79
0.04155444 Croatia_MLBA:I18732__BC_1150__Cov_52.93%
0.04157305 European:5434289003_R05C01
0.04160347 European:8324843039_R06C01
0.04174202 French_Brittany:Rennes_B_61
0.04174344 Austrian:Austria4
0.04182935 Mopi_Licinius_Crassus_scaled
0.04185505 jstephan_friend_scaled


Distance to: Jean-Paul_Marat__AD_1743__Cov_9.38%
0.04270555 BelgianC
0.04273013 French_Nord
0.04280261 Swiss_German
0.04358859 French_Occitanie
0.04399275 French_Alsace
0.04429205 BelgianB
0.04505833 French_Paris
0.04514779 French_Auvergne
0.04597465 Swiss_French
0.04780434 BelgianA
0.04888813 French_Pas-de-Calais
0.04905835 French_Provence
0.04907386 French_Brittany
0.04935597 French_Seine-Maritime
0.04940110 Italian_Aosta_Valley
0.04955439 Spanish_Penedes
0.04994267 Spanish_Girona

gixajo
07-22-2024, 09:19 AM
[CODE]Distance to: Jean-Paul_Marat__AD_1743__Cov_9.38%
DE]

Can you post his coordinates?

Ibericus
07-22-2024, 11:38 AM
Distance to: Jean-Paul_Marat__AD_1743__Cov_9.38%
0.04270555 BelgianC
0.04273013 French_Nord
0.04280261 Swiss_German
0.04358859 French_Occitanie
0.04399275 French_Alsace
0.04429205 BelgianB
0.04505833 French_Paris
0.04514779 French_Auvergne
0.04597465 Swiss_French
0.04780434 BelgianA
0.04888813 French_Pas-de-Calais
0.04905835 French_Provence
0.04907386 French_Brittany
0.04935597 French_Seine-Maritime
0.04940110 Italian_Aosta_Valley
0.04955439 Spanish_Penedes
0.04994267 Spanish_Girona
However this doesnt match his position on the PCA, he looks more central/south French rather than north French.

gixajo
07-22-2024, 11:54 AM
However this doesnt match his position on the PCA, he looks more central/south French rather than north French.

He was from French Switzerland so he has not to be specially Northern-shifted, anyway less than 10% coverage, that could affect somewhat his results.

Ajeje Brazorf
07-22-2024, 12:29 PM
Can you post his coordinates?

Sure, I forgot to add them!


France_Jean-Paul_Marat:Marat__AD_1743__Cov_9.38%,0.133173,0.13 2019,0.050911,0.027455,0.024004,0.005857,0.000235,-0.005769,0.013499,0.032802,0.019811,-0.0003,-0.017393,-0.007294,0.005972,-0.003315,-0.005476,0.002787,0.000377,0.00075,0.005241,-0.00371,0.009613,0.01205,-0.009221

Ibericus
07-22-2024, 01:03 PM
He was from French Switzerland so he has not to be specially Northern-shifted, anyway less than 10% coverage, that could affect somewhat his results.

hmm according to wikipedia his father was Sardinian, that's very strange, and the mother Swiss French.

gixajo
07-22-2024, 01:10 PM
hmm according to wikipedia his father was Sardinian, that's very strange, and the mother Swiss French.

So it´s quite strange, because these coordinates don´t show anything close to the mix you say.:confused:

Sardinian or "born in Sardinia"? If Marat was his paternal surname, it doesn´t sound very Sardinian/Italian...

Could be also just a problem related with the low coverage of the sample.

Beowulf
07-22-2024, 03:43 PM
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Distance to:
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0.05000417
France_Jean-Paul_Marat:Marat__AD_1743__Cov_9.38%



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