PDA

View Full Version : DNA analysis of skeletal remains shows genetic discontinuity in a Medieval Sicilian community



Ajeje Brazorf
07-24-2024, 01:44 PM
Multi-proxy bioarchaeological analysis of skeletal remains shows genetic discontinuity in a Medieval Sicilian community
https://royalsocietypublishing.org/doi/suppl/10.1098/rsos.240436


The medieval period in Sicily was turbulent, involving successive regime changes, from Byzantine (Greek Christian), Aghlabid (Sunni Muslim), Fatimid (Shı̄ʿa Muslim), to Normans and Swabians (Latin Christian).

To shed new light on the local implications of regime changes, we conducted a multidisciplinary analysis of 27 individuals buried in adjacent Muslim and Christian cemeteries at the site of Segesta, western Sicily. By combining radiocarbon dating, genome-wide sequencing, stable and radiogenic isotopic data, and archaeological records, we uncover genetic differences between the two communities but find evidence of continuity in other aspects of life.

Historical and archaeological evidence shows a Muslim community was present by the 12th century during Norman governance, with the Christian settlement appearing in the 13th century under Swabian governance. A Bayesian analysis of radiocarbon dates from the burials finds the abandonment of the Muslim cemetery likely occurred after the establishment of the Christian cemetery, indicating that individuals of both faiths were present in the area in the first half of the 13th century.

The biomolecular results suggest the Christians remained genetically distinct from the Muslim community at Segesta while following a substantially similar diet. This study demonstrates that medieval regime changes had major impacts beyond the political core, leading to demographic changes while economic systems persisted and new social relationships emerged.


Most individuals carried mitochondrial DNA haplotypes which are widely distributed across Eurasia; however, SGBN2, a male buried in the Muslim cemetery carried mitochondrial DNA haplotype L3e5 which is primarily found in sub-Saharan Africa. The Y-chromosome haplotypes were suggestive of differences between the cemeteries: individuals from the Muslim cemetery carried haplotypes associated with North Africa (E1b-M81 and E1b-M310.1) and the Eastern Mediterranean (J2b-M241), while four of the nine individuals buried in the Christian cemetery belonged to haplogroup R1b-M269, a haplogroup which is primarily found today in Western Europe.


Against a worldwide panel of 141 modern populations, we observed that all Segesta individuals fell within the PCA-space represented by Europe and North Africa, except for SGBN2, who fell within the diversity of sub-Saharan African populations.

Constricting the analysis to modern Eurasian and North African populations, we observed individuals from the Muslim cemetery showed affinity to one another, plotting between modern populations from Southern Europe, Southeastern Europe, North Africa and the Near East, the latter set including Jewish populations from the Near East and North Africa. One individual, SGBN7, plots between Near Eastern populations and modern North African populations. The individuals buried in the Christian cemetery plot separately in PCA-space, generally situated near modern populations from Eastern, Southern, Southeastern and Western Europe.

Those results indicate a genetic distinction between the groups, with no examples of individuals in one cemetery having a stronger genetic affinity to those from the other cemetery. While the available assemblage was biased toward males, the number of children from the Christian cemetery provided an opportunity to identify offspring of interfaith unions: none were detected.

Continuing at the scale of Eurasia and North Africa, we also evaluated these groups’ affinity to Iron Age Sicani individuals from Sicily, finding the Christian individuals overlapped the PCA-space occupied by the ancient Sicilian Iron Age individuals. When SGBN2 is examined in the context of African populations, we observe the individual plots with groups from West and East Africa.

https://i.ibb.co/0t17gXv/01.png

https://i.ibb.co/4V5tz5y/02.png

https://i.ibb.co/1n5K0WD/03.png

https://i.ibb.co/TrdBzFk/04.png

Ajeje Brazorf
07-24-2024, 01:45 PM
<colgroup><col><col><col><col><col><col></colgroup><tbody>
Individual
Burial rite
Tomb type
Date
Y-DNA
mtDNA


SGBN1
Islamic
Stone-lined
1170
E1b1b1b1a-M81 / E-CTS6185/etc*(xMZ72,Z36168,Z36171,Y23468,BY8969,MZ6,MZ87,M7 143,A429,BY10030,BY9942,PF2542,BY10235,A601)
H


SGBN10
Christian
Stone-cover
1305
E1b1b1a1b1a-V13 / E-PF2211*(xM7149,Z42903,BY5509,BY5675,Z37871,Z37873, Y16265,BY7875,Z21287,BY4850,CTS5045,FGC14571,Y1671 8,Y19644,BY5026,BY6058,S3003,SK888,BY4610)
H17


SGBN11
Christian
Stone-cover
1254
NA
NA


SGBN12
Christian
Stone-cover
1237
T1a-M70 / T-CTS1482/etc*(xCTS12204,FGC23010)
R1a1a2


SGBN15
Christian
NA
1162
NA
NA


SGBN16
Christian
NA
1162
NA
NA


SGBN17
Christian
NA
1317
NA
J2a1a2a1a


SGBN18
Christian
NA
1290
E1b1b1a1b1a-V13 / E-Z38456
H1c


SGBN18_19
Christian
NA
1270
E1b1b1a1b1a-V13 / E-Z38456
H1c


SGBN19
Christian
NA
1250
E1b1b1a1b1a-V13 / E-BY6060*(xBY4643,BY5793,BY6204)
H1c


SGBN2
Islamic
Stone-marked with presence of a flute
1160
E1b1b1b1-M310.1 / E-PF2442/etc*(xPF2469,Z36734)
L3e5


SGBN20
Christian
NA
1305
E1b1b1a1-M78 / E-FGC11422*(xZ36785,BY6060,BY5224,Y12394,Z36882,S260 15,Z21356,Z36778)
H1c


SGBN21
Christian
Stone-cover
1305
NA
H50 °


SGBN22
Christian
Stone-cover
1217
R1b1a1b-M269 / R-S17864/etc*(xCTS7556)
N1b1a2b


SGBN23
Christian
NA
1120
R1b1a1b-M269 / R-CTS4608/etc*(xFGC3868,A411,S5556,Z37884,Y14075,A6710,BY961 94,FGC33321,S20039,FGC8590,Z25,FGC937,A294,FGC1742 9,S15565,FGC19763,CTS9539,Z326,S10271,Z154,FGC414, FGC18015,L221,FGC37115,CTS5981,CTS7556,A11715,Z297 86,GG460,FGC42029,FGC31942)
T2b7a3


SGBN24A
Christian
NA
1315
R1b1a1b-M269 / R-P312*(xL1246,L408,L671,S259,CTS7193.2,S461,Z2245,D F19,Y18213)
U6a1a1


SGBN24B
Christian
NA
1162
NA
NA


SGBN25
Christian
NA
1300
J2a-M410 / J-AM00168/etc
H27


SGBN26
Christian
Stone-cover
1317
R1b1a1b-M269 / R-CTS10834/etc*(xAM01882,YSC0000054,A319,S5520,JFS0009,S9787, L48,FGC20676,FGC12021,A2148,PF7595,S180,L562,FGC12 380,S20782,Z144,A2202,A1742,A11242,FGC36640,BY3939 6,BY287,BY24055,A103,FGC13017,CTS6621,A7664,S1120, S883,MC14,S3033,BY2725,BY12312,Z16539,S6168,Z16306 ,BY635,FGC63586,BY4010,BY31354,FGC55499,FGC11320,F GC23396,FGC33396,Z2993,A7907,A8039,A8062,GG445,FGC 42003,FGC31933)
H1a3c1


SGBN27
Christian
NA
1254
NA
NA


SGBN3
Islamic
Earth
1165
E1b1b1b1a-M81 / E-CTS7248/etc*(xZ36186,Z21392,BY9947,PF2575,MZ62,BY10180)
H3


SGBN30
Islamic
NA
1122
NA
NA


SGBN4
Islamic
Stone-marked
1135
NA
K2b1


SGBN5
Islamic
Stone-lined
872
J2b2a-M241 / J-AM00218/etc*(xAMM451,Y34372,YP122,YP29)
N1b1a2


SGBN6
Islamic
Stone-lined
1117
NA
J1d4


SGBN7
Islamic
Earth
1140
T1a-M70 / T-CTS9984
J1c2i


SGBN8
Islamic
Stone-marked, presence of grave goods
1227
NA
W+194°


SGBN9
Christian
Stone-cover
1300
NA
T2b+152

</tbody>

Beowulf
07-24-2024, 02:08 PM
Are their G25 coordinates avalaible?

Leto
07-24-2024, 02:18 PM
Interesting. One guy was essentially a black African Muslim. Were most of the Muslims later expelled?

Ajeje Brazorf
07-24-2024, 04:59 PM
Were most of the Muslims later expelled?

Those who had the means left Sicily voluntarily, while others decided to stay and maintain Islam, and many gradually converted to Christianity.

At the beginning of their rule, the Normans adopted a policy of relative tolerance towards the Muslims. The Normans, coming from Normandy and of Christian faith, were aware of the ethnic and religious complexity of Sicily and, to consolidate their power, realized that they needed to maintain a certain degree of administrative and cultural continuity. For this reason, the Normans allowed the Muslims to continue practicing their religion, maintaining their institutions, and managing their own internal affairs.

Roger I and his son, Roger II, were known for their cultural openness. Roger II, in particular, integrated many elements of Islamic culture into his court and administration. The Arabic language continued to be used in administration, and many Muslim officials retained their positions. The capital, Palermo, remained a cosmopolitan center and a meeting place for various cultural and religious traditions.

Over time, however, the situation for the Muslims began to deteriorate. The growing influence of the Catholic Church and political pressures led to increased discrimination against the Muslims. Henry VI, Holy Roman Emperor, who conquered Sicily in 1194, and his son Frederick II, pursued more repressive policies towards the Muslims compared to the previous Normans.

Frederick II of Hohenstaufen, who ruled from 1220 to 1250, is a key figure in this period of transition. Frederick was an extremely learned and culturally open sovereign, and initially sought to maintain peace among the various religious communities of Sicily (he even spoke Arabic). However, frequent Muslim uprisings and pressures from the Catholic Church led him to take drastic measures.

Between 1220 and 1246, Frederick II deported a large part of the Muslim population (around 60.000, which means almost all of the Muslim population of the island) from Sicily to Apulia, mostly in the city of Lucera in northern Apulia. This deportation was part of a strategy to reduce tensions and prevent further uprisings. In Lucera, Frederick established a Muslim colony under the direct control of the crown, granting the Muslims a degree of autonomy in exchange for their loyalty and military service.

The eradication of Islam in Sicily was completed by the end of the 1240s. To re-Latinize the island (since many spoke Arabic or were Greek-Orthodox in ethnicity and religion), the Hohenstaufen dynasty, its successors, and the Roman Church especially, chose to import thousands of settlers from the northwest and the south of Italy. In fact, there are still small towns in Sicily where the Gallo-Italian dialect of those northwest settlers is spoken (https://youtu.be/Aq0IcZrwnpI?feature=shared&t=88) to this day.

Lucera became an important Muslim center in Italy, with mosques, schools, and Islamic courts. The Muslims of Lucera enjoyed relative autonomy and constituted a thriving community. However, this situation lasted only until 1300, when Charles II of Anjou ordered the destruction of the colony. The Muslim population was largely massacred, sold into slavery, or forced to convert to Christianity, ending organized Muslim presence in Italy.

Leto
07-26-2024, 04:31 PM
But they don't seem to have been full Arabs or anything like that, more like locals with some non-local admixture. Probably 75-80% local, 20-25% foreign on average. And it's unclear how much of their genetics lives on in modern-day Sicilians and Apulians.

Ajeje Brazorf
09-22-2024, 09:54 AM
Italy_Sicily_Segesta_Christian_Medieval:SGBN10__AD _1305__Cov_?,0.092197,0.133034,0.000377,-0.018411,0.038469,-0.009203,-0.013396,0,0.001023,0.021322,-0.001624,0.008093,-0.001933,-0.001376,-0.004886,0.003315,0.006128,0.005574,-0.007668,0.006753,-0.008111,-0.013973,-0.000246,0.009278,-0.007664
Italy_Sicily_Segesta_Christian_Medieval:SGBN12__AD _1237__Cov_?,0.08992,0.139128,0.004525,-0.033269,0.008001,-0.030678,0.001645,-0.008538,0.009204,0.015855,0.004709,-0.006294,-0.013528,-0.006744,0.010043,0.013126,0.018906,0.006334,0.008 673,-0.002626,-0.007362,0.004699,-0.000616,0.002892,-0.001676
Italy_Sicily_Segesta_Christian_Medieval:SGBN17__AD _1317__Cov_?,0.092197,0.137096,-0.008674,-0.034561,0.011694,-0.008088,-0.001175,0,0.000818,0.008383,0.000974,3e-04,-0.005798,0.001376,-0.013979,0.015513,0.009909,-0.00228,-0.003645,-0.003627,-0.006613,0.000618,0.002218,-0.000361,0.001197
Italy_Sicily_Segesta_Christian_Medieval:SGBN19__AD _1250__Cov_?,0.118376,0.151314,0.012068,-0.003876,0.044624,-0.001952,-0.00705,0.003692,0.003681,0.029887,-0.009094,0.005245,-0.01115,-0.010872,-0.007872,0.028109,0.019427,0.013049,0.007668,-0.008129,-0.009234,-0.002226,-0.005176,0.013134,-0.00934
Italy_Sicily_Segesta_Christian_Medieval:SGBN20__AD _1305__Cov_?,0.112685,0.133034,0.023004,-0.00646,0.037238,0.000837,0.004935,-0.007154,0.008385,0.021139,-0.002111,0.003147,-0.014271,-0.013625,0.001629,0.014717,0.017863,-0.005701,0.003268,0.005253,-0.007237,0.000618,-0.003944,0.005061,-0.009221
Italy_Sicily_Segesta_Christian_Medieval:SGBN22__AD _1217__Cov_?,0.114961,0.14319,0.010182,-0.02907,0.017542,-0.007251,0.00094,-0.003,0.009204,0.01713,0.004222,0.005245,-0.004757,-0.005092,-0.004614,-0.000663,-0.004172,0.002534,0.000628,-0.002126,-0.006738,0.000371,0.002465,0.004579,0.00012
Italy_Sicily_Segesta_Christian_Medieval:SGBN23__AD _1120__Cov_?,0.113823,0.152329,0.020365,-0.015181,0.030159,0.012829,0.027966,0.007384,0.005 727,0.013485,-0.001624,0.005095,-0.027056,-0.001651,0.016829,-0.005967,-0.006128,-0.001267,0.005531,-0.001,0.022211,0.000618,-0.003204,-0.007832,0.005508
Italy_Sicily_Segesta_Christian_Medieval:SGBN24__AD _1315__Cov_?,0.113823,0.148267,0.011691,-0.027455,0.025235,-0.008925,0.00047,0.003231,0.00225,0.023873,0.00162 4,0.001798,-0.010555,-0.006193,0.001493,0.005834,0.005215,-0.002914,0.004651,-0.003627,0.003619,0.006801,-0.012571,-0.000964,-0.000479
Italy_Sicily_Segesta_Muslim_Medieval:SGBN1__AD_117 0__Cov_?,0.067156,0.139128,-0.018102,-0.041667,0.015387,-0.025658,-0.013161,-0.009923,0.007363,0.018953,-0.002273,0.004796,-0.004014,0.005918,-0.008415,0.001193,0.000782,0.001774,0.003771,-0.002251,-0.006863,-0.005688,-0.002835,-0.008676,-0.001197
Italy_Sicily_Segesta_Muslim_Medieval:SGBN4__AD_113 5__Cov_?,0.055773,0.137096,-0.007165,-0.052003,0.019388,-0.018128,-0.007755,0.001615,0.024747,0.016219,0.002923,-0.008393,0.010406,-0.006606,0.006922,0.003182,0.00665,-0.015076,-0.020866,0.008254,-0.00287,-0.004081,0.002342,0.004699,0.002395
Italy_Sicily_Segesta_Muslim_Medieval:SGBN5__AD_872 __Cov_?,0.067156,0.137096,-0.009805,-0.042636,0.017849,-0.022869,-0.016686,-0.010846,0.016566,0.021139,0.008119,0.012739,0.000 595,-0.003578,-0.011265,0.003315,0.005346,-0.005701,-0.006411,0.000625,-0.012603,0.000866,0.00456,0.002289,-0.005748
Italy_Sicily_Segesta_Muslim_Medieval:SGBN6__AD_111 7__Cov_?,0.062603,0.142174,-0.017725,-0.047158,0.00954,-0.008088,-0.002585,0.003,0.009613,0.015672,0.002273,-0.00015,-0.001933,-0.000688,-0.002714,-0.008353,-0.004955,0.002407,0.009804,-0.007128,-0.006239,-0.00643,0.001849,-0.005543,0.001676
Italy_Sicily_Segesta_Muslim_Medieval:SGBN7__AD_114 0__Cov_?,0.027318,0.129988,-0.003771,-0.042959,0.007694,-0.020638,-0.00893,0.007154,0.018816,0.016948,0.002436,0.0031 47,0.000743,-0.009358,0.003257,0.010342,0.0236,-0.003674,-0.015712,0.007379,-0.010107,-0.007543,0.017255,-0.007832,0.011975
Italy_Sicily_Segesta_Muslim_Medieval_o:SGBN2__AD_1 160__Cov_?,-0.583913,0.063978,0.012822,0.009367,-0.000615,0.008925,-0.033607,0.035537,0.005931,-0.013485,0.004222,0.004796,-0.00773,-0.000138,0.005972,-0.009546,0.004955,-0.006588,0.006411,-0.006628,-0.003743,0.000247,-0.002095,0.00253,0.003832

Ajeje Brazorf
09-22-2024, 09:59 AM
VERY interesting


Distance to: Italy_Sicily_Segesta_Muslim_Medieval_o:SGBN2__AD_1 160
0.02370370 Mada:T_Mada-2.DG
0.02728613 Mada
0.03346258 Georgia_Abkhazia_Zana:Zana_final__AD_1850__Cov_93. 37%
0.03600769 Mada:T_Mada-1.DG
0.04630631 Tanzania_WASAMBAA:per93
0.04768264 Laka:T_Laka-2.DG
0.04826319 Laka
0.04836227 Kenya_GIRIAMA:per54
0.04935977 Tanzania_WABONDEI:per41

Tacitus
09-22-2024, 12:59 PM
VERY interesting


Distance to: Italy_Sicily_Segesta_Muslim_Medieval_o:SGBN2__AD_1 160
0.02370370 Mada:T_Mada-2.DG
0.02728613 Mada
0.03346258 Georgia_Abkhazia_Zana:Zana_final__AD_1850__Cov_93. 37%
0.03600769 Mada:T_Mada-1.DG
0.04630631 Tanzania_WASAMBAA:per93
0.04768264 Laka:T_Laka-2.DG
0.04826319 Laka
0.04836227 Kenya_GIRIAMA:per54
0.04935977 Tanzania_WABONDEI:per41


SGBN2 Islamic Stone-marked with presence of a flute 1160 E1b1b1b1-M310.1 / E-PF2442/etc*(xPF2469,Z36734) L3e5

Distance to: Italy_Sicily_Segesta_Muslim_Medieval_o:SGBN2__AD_1 160__Cov_?
0.02728613 Mada
0.04826319 Laka
0.05149109 Kaba
0.06581199 Luo
0.06593249 Gambian
0.06811128 Mandenka
0.07026800 Mwani
0.07322408 Cameroon_Bakoko
0.07373806 Luhya_Kenya
0.07434224 Lemande
0.07486793 Cameroon_Aghem
0.07600500 Bantu_Kenya
0.07668580 Umbundu
0.07683983 Cameroon_Bafut
0.07684116 Cameroon_Bangwa
0.07744234 Tikar_South
0.07821005 Cameroon_Mbo
0.07844397 Makhuwa
0.07850704 Ganguela
0.07874237 Nyaneka
0.07888257 Sena
0.07983106 Nyanja
0.07995918 Ndau
0.08069155 Kongo
0.08121315 Ngumba

https://www.101lasttribes.com/tribes/mada.html

Could have been a slave from Subsaharan Africa with skills as a musician. IIRC, Arab slave traders were already active in East Africa at the time. Very interesting indeed.