Genome-wide ancient DNA data from 7,000-year-old individual from Takarkori Rockshelter in Libya

[Ajeje Brazorf]

https://www.ebi.ac.uk/ena/browser/view/PRJEB84057

https://i.imgur.com/L1igiNG.png

This sample exhibits a genetic ancestry composition of approximately 36% Taforalt-like, 32-34% Dinka-like, and 30-32% Yoruba-like.


Libya_Takarkori_N:TKH001_tr_all,-0.455292,0.078196,-0.003771,-0.026486,0.010463,-0.018965,-0.058518,0.032537,0.077719,-0.019864,-0.001786,0.003897,0.020664,-0.025598,0.033387,-0.023734,0.010561,-0.032559,-0.036452,0.007504,-0.0141,-0.045504,0.029703,-0.006868,0.010179


Distance to: Libya_Takarkori_N:TKH001_tr_all
0.07643715 Chad_Daza_DAZ12
0.07773740 Toubou_Chad_scaled
0.08078132 Goran_of_Garamantia_scaled
0.08248696 Chad_Daza_o_DAZ14
0.08408228 Chad_Daza_DAZ21
0.08411737 Chad_Daza_DAZ26
0.08497152 Chad_Daza_DAZ41
0.08715414 Chad_Daza_DAZ10
0.08738062 Baggara_Arab_Chad_B_ABA019
0.08778743 Chad_Daza_DAZ08
0.08807424 Chad_Daza
0.08910695 Chad_Daza_DAZ30

[Peterski]

This is what they score in K36 and K47 (I used the non-trimmed version from crashdoc's link):


K36:


Sample TKH001.txt
Amerindian 0.5
Arabian 0
Armenian 0
Basque 0
Central African 14.04
Central Euro 0
East African 18.6
East Asian 0
East Balkan 0
East Central Asian 0
East Central Euro 0
East Med 0
Eastern Euro 0
Fennoscandian 0
French 0
Iberian 0
Indo-Chinese 0.9
Italian 0
Malayan 0
Near Eastern 0
North African 20.38
North Atlantic 0
North Caucasian 0
North Sea 0
Northeast African 8.7
Oceanian 0
Omotic 0.87
Pygmy 0
Siberian 0
South Asian 0
South Central Asian 0
South Chinese 0
Volga-Ural 0
West African 36
West Caucasian 0
West Med 0


Sample TKH009.txt
Amerindian 2.56
Arabian 0
Armenian 0
Basque 0
Central African 16.43
Central Euro 0
East African 29
East Asian 0
East Balkan 0
East Central Asian 0
East Central Euro 0
East Med 0
Eastern Euro 0
Fennoscandian 0
French 0
Iberian 0
Indo-Chinese 0
Italian 0
Malayan 0
Near Eastern 0
North African 15.39
North Atlantic 0
North Caucasian 0
North Sea 0
Northeast African 1.78
Oceanian 0
Omotic 1.59
Pygmy 0
Siberian 0
South Asian 0
South Central Asian 0
South Chinese 0
Volga-Ural 0
West African 33.25
West Caucasian 0
West Med 0


K47:


Sample TKH001.txt
Kushitic 19.76
North-Iberian 0
East-Iberian 0
Tibeto-Burman 0
North-African 16.89
South-Caucasian 0
North-Caucasian 0
Paleo-Balkan 0
Turkic-Altai 0
Proto-Austronesian 0
Nilotic 12.47
East-Med 0
Omotic 1.79
Munda 0
North-Amerind 0
Arabic 0
East-Euro 0
Central-African 0
Andean 0.2
Indo-Chinese 0
South-Indian 0.27
NE-Asian 0
Volgan 0
Mongolian 0
Siberian 0
North-Sea-Germanic 0
Celtic 0
West-African 35.35
West-Finnic 0
Uralic 0
Sahelian 7.45
NW-Indian 0
East-African 3.84
East-Asian 0
Amuro-Manchurian 0.74
Scando-Germanic 0
Iranian 0
South-African 0
Amazonian 0
Baltic 0
Malay 0
Meso-Amerind 0
South-Chinese 0
Papuan 1.25
West-Med 0
Pamirian 0
Central-Med 0


Sample TKH009.txt
Kushitic 0
North-Iberian 0
East-Iberian 0
Tibeto-Burman 0
North-African 20.01
South-Caucasian 0
North-Caucasian 0
Paleo-Balkan 0
Turkic-Altai 0
Proto-Austronesian 0
Nilotic 6.88
East-Med 0
Omotic 6.46
Munda 0
North-Amerind 0
Arabic 0
East-Euro 0
Central-African 0
Andean 0
Indo-Chinese 0
South-Indian 0
NE-Asian 0
Volgan 0
Mongolian 0
Siberian 0
North-Sea-Germanic 0
Celtic 0
West-African 41.06
West-Finnic 0
Uralic 0
Sahelian 8.53
NW-Indian 0
East-African 14.77
East-Asian 0
Amuro-Manchurian 0
Scando-Germanic 0
Iranian 0
South-African 0
Amazonian 0.3
Baltic 0
Malay 0
Meso-Amerind 0
South-Chinese 0
Papuan 1.98
West-Med 0
Pamirian 0
Central-Med 0

[Gannicus]

Those guys are quite different

Distance to: Morocco_Iberomaurusian:TAF010_noUDG
0.33811004 Libya_Takarkori_N:TKH001_tr_all
0.34030687 Libya_Takarkori_N:TKH001
0.34182857 Libya_Takarkori_N:TKH001_tr.SG.TW

Distance to: Egyptian_Old_Middle_Kingdom_Period_Dahshur:I10020
0.49402295 Libya_Takarkori_N:TKH001_tr_all
0.49489398 Libya_Takarkori_N:TKH001
0.49750498 Libya_Takarkori_N:TKH001_tr.SG.TW

Distance to: Egyptian_Old_Kingdom_Period_Gizeh:I6409
0.51984960 Libya_Takarkori_N:TKH001_tr_all
0.52132774 Libya_Takarkori_N:TKH001
0.52330579 Libya_Takarkori_N:TKH001_tr.SG.TW

Distance to: Gannicus_MergedFile_officialDavidski_scaled
0.61238556 Libya_Takarkori_N:TKH001
0.61245699 Libya_Takarkori_N:TKH001_tr_all
0.61524935 Libya_Takarkori_N:TKH001_tr.SG.TW

[Ajeje Brazorf]

delete