Eurogenes Biogeographic Ancestry Project

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Originally Posted by Polako

I'll try and break that up. It should budge sooner or later.

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There is no data in the spreadsheet - only usernames :(

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Originally Posted by Loki

There is no data in the spreadsheet - only usernames :(

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The spreadsheet lists the cluster assignments only, while the data (including cluster assignments) is presented on the two images. There's also a PCA, and I'll upload the coordinates eventually so those interested can run them in Gnuplot.

Obviously, I have a lot more data, including segment matches between individuals, but it's several gigabytes in size, so it has to processed and simplified in some way.

Day Tripper has some ideas how to deal with it, and he's looking at it now. Hopefully we'll be able to produce intra-North Euro ancestry paintings. At the very least, that could be a very interesting experiment.

Quote:

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Originally Posted by Polako

The spreadsheet lists the cluster assignments only, while the data (including cluster assignments) is presented on the two images. There's also a PCA, and I'll upload the coordinates eventually so those interested can run them in Gnuplot.

Obviously, I have a lot more data, including segment matches between individuals, but it's several gigabytes in size, so it has to processed and simplified in some way.

Day Tripper has some ideas how to deal with it, and he's looking at it now. Hopefully we'll be able to produce intra-North Euro ancestry paintings. At the very least, that could be a very interesting experiment.

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Oh I see, I fall into the "French" cluster. Interestingly, I do as well on Dienekes' analysis.

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Originally Posted by Loki

Oh I see, I fall into the "French" cluster. Interestingly, I do as well on Dienekes' analysis.

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Yeah, that can probably be broken up too, like many of the other clusters.

Is Day Tripper on this forum? Maybe he can comment directly?

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Originally Posted by Polako

Is Day Tripper on this forum? Maybe he can comment directly?

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No, I don't think so.

It would be nice to organise this information into an excel table. Pasting parts of an image to see individual results seems a little crude.

The results sometimes seem to find admixed individuals in amusing clusters. For instance, RU19 with his known Ashkenazi admixture is in the West Ukrainian cluster. RU23, I suppose, ended up outside the analysis (being seemingly the equivalent of a Chuvash).

Another interesting thing for myself is that one of my two closest violet matches (RU38 and GSM536625, a Hungarian) is from a fairly distant cluster (POP11, East German).

Pop15 (East Slavic)
http://i51.photobucket.com/albums/f3.../EastSlavs.png

Pop11 (East German)
http://i51.photobucket.com/albums/f3...e/EastGerm.png

Pop9 (Lithuanian) - appears similar
http://i51.photobucket.com/albums/f3...nophage/LT.png

Some other relevant pops:
http://i.imm.io/eD6e.png

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Originally Posted by Polako

Is Day Tripper on this forum? Maybe he can comment directly?

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He seems to be, but he doesn't post often: http://www.theapricity.com/forum/member.php?u=3336

http://i.imgur.com/d7IGj.jpg
http://i.imgur.com/1Elve.jpg

^ Hehehe...wrong thread.

Ops, sorry I was tired:D