Eurogenes K15 PCA

Quote:

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Originally Posted by Ibericus

https://image.ibb.co/iGMKnv/Ali_Pasha.png

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Is it possible to add some ancient Balkan sample to these maps? Some from modern yugoslavia and Bulgaria perhaps.

Quote:

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Originally Posted by Ali Pasha Tepelena

Is it possible to add some ancient Balkan sample to these maps? Some from modern yugoslavia and Bulgaria perhaps.

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I have not balkan samples yet, are they available on gedmatch ?

Quote:

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Originally Posted by Ibericus

I have not balkan samples yet, are they available on gedmatch ?

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You could add some of these if it works:
http://www.y-str.org/p/ancient-dna.html

ok some ancient samples :

https://image.ibb.co/d1NTZa/ancient.jpg

Quote:

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Originally Posted by Ibericus

I have not balkan samples yet, are they available on gedmatch ?

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I will try and find out. There should be some available.

Update : Maltese added.

https://image.ibb.co/n6zM5F/k15_PCA.jpg

Ibericus do you do 1 by 1 or you have an automatic way to do this? ii would like you to plot 70 argentines XD

All of ancient Balkan samples published so far are low coverage.

But add West Anatolian (near Marmara Sea) Copper Age I1584:

Population
North_Sea 6.51
Atlantic 11.20
Baltic -
Eastern_Euro -
West_Med 24.01
West_Asian 26.22
East_Med 32.07
Red_Sea -
South_Asian -
Southeast_Asian -
Siberian -
Amerindian -
Oceanian -
Northeast_African -
Sub-Saharan -

Oracle results:

Spoiler!

Kit M091434

Admix Results (sorted):

# Population Percent
1 East_Med 32.07
2 West_Asian 26.22
3 West_Med 24.01
4 Atlantic 11.2
5 North_Sea 6.51

Single Population Sharing:

# Population (source) Distance
1 South_Italian 13.23
2 Central_Greek 14.86
3 Cyprian 15.19
4 East_Sicilian 15.69
5 Italian_Jewish 15.96
6 Sephardic_Jewish 16.43
7 Italian_Abruzzo 16.69
8 Algerian_Jewish 16.83
9 West_Sicilian 18.09
10 Turkish 18.13
11 Ashkenazi 18.51
12 Tunisian_Jewish 18.69
13 Lebanese_Muslim 19.32
14 Armenian 19.56
15 Greek 19.68
16 Libyan_Jewish 20.22
17 Assyrian 20.53
18 Greek_Thessaly 20.69
19 Georgian_Jewish 21.22
20 Tuscan 21.35

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 64.6% Armenian + 35.4% Sardinian @ 6.39
2 63% Georgian_Jewish + 37% Sardinian @ 8.18
3 64.2% Assyrian + 35.8% Sardinian @ 8.94
4 59.9% Kurdish + 40.1% Sardinian @ 10.35
5 67.8% South_Italian + 32.2% Armenian @ 10.71
6 81.9% South_Italian + 18.1% Abhkasian @ 10.93
7 69.3% Turkish + 30.7% Sardinian @ 10.96
8 80.9% South_Italian + 19.1% Georgian @ 11.13
9 61.9% Kurdish_Jewish + 38.1% Sardinian @ 11.22
10 73.3% Algerian_Jewish + 26.7% Abhkasian @ 11.57
11 62.4% Azeri + 37.6% Sardinian @ 11.58
12 73.9% South_Italian + 26.1% Georgian_Jewish @ 11.65
13 75.5% Italian_Jewish + 24.5% Abhkasian @ 11.66
14 61% Iranian_Jewish + 39% Sardinian @ 11.7
15 53.3% Armenian + 46.7% Tuscan @ 11.72
16 66.1% Armenian + 33.9% Spanish_Andalucia @ 11.73
17 71.5% Algerian_Jewish + 28.5% Georgian @ 11.77
18 53.2% West_Sicilian + 46.8% Armenian @ 11.78
19 84.2% South_Italian + 15.8% Ossetian @ 11.81
20 60.6% Armenian + 39.4% North_Italian @ 11.84

Add also Hungarian Late Bronze Age (Kyjatice culture) BR2:

Population
North_Sea 22.92
Atlantic 25.71
Baltic 15.34
Eastern_Euro 10.93
West_Med 15.58
West_Asian -
East_Med 7.19
Red_Sea 1.95
South_Asian -
Southeast_Asian -
Siberian -
Amerindian -
Oceanian 0.17
Northeast_African -
Sub-Saharan 0.21

Oracle results:

Spoiler!

Kit F999933

Admix Results (sorted):

# Population Percent
1 Atlantic 25.71
2 North_Sea 22.92
3 West_Med 15.58
4 Baltic 15.34
5 Eastern_Euro 10.93
6 East_Med 7.19
7 Red_Sea 1.95
8 Sub-Saharan 0.21
9 Oceanian 0.17

Single Population Sharing:

# Population (source) Distance
1 Austrian 9.21
2 East_German 9.37
3 French 9.6
4 South_Dutch 9.69
5 Hungarian 11.37
6 Spanish_Cataluna 11.62
7 Spanish_Galicia 11.97
8 Serbian 12.19
9 Spanish_Castilla_Y_Leon 12.61
10 Portuguese 12.66
11 West_German 12.68
12 Croatian 13.31
13 Southwest_French 13.35
14 North_German 13.84
15 Spanish_Extremadura 13.89
16 Southwest_English 13.98
17 Spanish_Murcia 14
18 Spanish_Cantabria 14.1
19 Spanish_Valencia 14.48
20 Southeast_English 14.83

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 66.6% Spanish_Cataluna + 33.4% Estonian @ 2.99
2 61.6% Spanish_Cataluna + 38.4% Polish @ 3.12
3 61.3% Spanish_Valencia + 38.7% Estonian @ 3.22
4 69.7% Spanish_Cataluna + 30.3% Lithuanian @ 3.24
5 58.5% Spanish_Aragon + 41.5% Estonian @ 3.28
6 66.2% Spanish_Cataluna + 33.8% Estonian_Polish @ 3.29
7 66.4% Spanish_Cataluna + 33.6% Belorussian @ 3.31
8 62% Spanish_Cantabria + 38% Estonian @ 3.33
9 62.2% Spanish_Murcia + 37.8% Estonian @ 3.39
10 59.6% Spanish_Castilla_La_Mancha + 40.4% Estonian @ 3.51
11 64.8% Spanish_Castilla_Y_Leon + 35.2% Estonian @ 3.51
12 62.4% Spanish_Extremadura + 37.6% Estonian @ 3.59
13 56.9% Spanish_Murcia + 43.1% Polish @ 3.6
14 59.7% Spanish_Castilla_Y_Leon + 40.3% Polish @ 3.74
15 53% Spanish_Aragon + 47% Ukrainian @ 3.78
16 59.6% Portuguese + 40.4% Polish @ 3.79
17 56.8% Spanish_Cantabria + 43.2% Polish @ 3.84
18 61.7% Spanish_Cataluna + 38.3% Ukrainian @ 3.84
19 60.4% Spanish_Cataluna + 39.6% South_Polish @ 3.86
20 64.9% Portuguese + 35.1% Estonian @ 3.86

And add also three Copper Age North Italians from Remedello di Sotto:

Remedello culture, RISE487 (3483-3107 BC):

Population
North_Sea 0.15
Atlantic 42.42
Baltic 2.54
Eastern_Euro -
West_Med 54.89
West_Asian -
East_Med -
Red_Sea -
South_Asian -
Southeast_Asian -
Siberian -
Amerindian -
Oceanian -
Northeast_African -
Sub-Saharan -

Oracle results:

Spoiler!

Kit T699825

Admix Results (sorted):

# Population Percent
1 West_Med 54.89
2 Atlantic 42.42
3 Baltic 2.54
4 North_Sea 0.15

Single Population Sharing:

# Population (source) Distance
1 Sardinian 24.7
2 French_Basque 30.85
3 Spanish_Aragon 34.13
4 Southwest_French 34.24
5 Spanish_Andalucia 34.73
6 Spanish_Cantabria 34.76
7 Spanish_Castilla_La_Mancha 35.2
8 Spanish_Valencia 35.9
9 Spanish_Extremadura 38.18
10 Spanish_Murcia 38.32
11 Spanish_Castilla_Y_Leon 38.33
12 Spanish_Cataluna 38.94
13 Portuguese 39.16
14 Spanish_Galicia 40.15
15 North_Italian 40.25
16 Tuscan 43.94
17 French 46.28
18 West_Sicilian 47.4
19 Greek 48.58
20 Mozabite_Berber 49.27

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 65.2% Sardinian + 34.8% French_Basque @ 21.77
2 82.6% Sardinian + 17.4% Southwest_French @ 24.16
3 83.8% Sardinian + 16.2% Spanish_Aragon @ 24.26
4 86.4% Sardinian + 13.6% Spanish_Cantabria @ 24.39
5 88.6% Sardinian + 11.4% Spanish_Castilla_La_Mancha @ 24.48
6 91.6% Sardinian + 8.4% Spanish_Valencia @ 24.58
7 92.1% Sardinian + 7.9% Spanish_Andalucia @ 24.61
8 97.7% Sardinian + 2.3% Spanish_Castilla_Y_Leon @ 24.69
9 98.8% Sardinian + 1.2% Spanish_Cataluna @ 24.7
10 100% Sardinian + 0% Irish @ 24.7
11 100% Sardinian + 0% Abhkasian @ 24.7
12 100% Sardinian + 0% Adygei @ 24.7
13 100% Sardinian + 0% Afghan_Hazara @ 24.7
14 100% Sardinian + 0% Afghan_Pashtun @ 24.7
15 100% Sardinian + 0% Afghan_Tadjik @ 24.7
16 100% Sardinian + 0% Afghan_Turkmen @ 24.7
17 100% Sardinian + 0% Afghan_Uzbeki @ 24.7
18 100% Sardinian + 0% Algerian @ 24.7
19 100% Sardinian + 0% Algerian_Jewish @ 24.7
20 100% Sardinian + 0% Altaian @ 24.7

Remedello culture, RISE489 (2908-2578 BC):

Population
North_Sea 6.21
Atlantic 32.55
Baltic -
Eastern_Euro -
West_Med 55.26
West_Asian -
East_Med 5.98
Red_Sea -
South_Asian -
Southeast_Asian -
Siberian -
Amerindian -
Oceanian -
Northeast_African -
Sub-Saharan -

Oracle results:

Spoiler!

Kit T135721

Admix Results (sorted):

# Population Percent
1 West_Med 55.26
2 Atlantic 32.55
3 North_Sea 6.21
4 East_Med 5.98

Single Population Sharing:

# Population (source) Distance
1 Sardinian 15.6
2 Spanish_Andalucia 31.22
3 French_Basque 31.3
4 Spanish_Aragon 31.34
5 Spanish_Cantabria 31.45
6 Southwest_French 31.75
7 Spanish_Castilla_La_Mancha 32.04
8 Spanish_Valencia 32.65
9 Spanish_Extremadura 33.9
10 Spanish_Murcia 34.26
11 Portuguese 34.52
12 Spanish_Castilla_Y_Leon 34.59
13 Spanish_Cataluna 35.01
14 North_Italian 35.09
15 Spanish_Galicia 35.28
16 Tuscan 38.38
17 West_Sicilian 41.8
18 French 42.14
19 Greek 43.4
20 Italian_Abruzzo 43.84

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 82.8% Sardinian + 17.2% French_Basque @ 14.5
2 94.3% Sardinian + 5.7% Southwest_French @ 15.51
3 95% Sardinian + 5% Spanish_Aragon @ 15.54
4 95.4% Sardinian + 4.6% Spanish_Cantabria @ 15.55
5 98% Sardinian + 2% Spanish_Castilla_La_Mancha @ 15.59
6 100% Sardinian + 0% Abhkasian @ 15.6
7 100% Sardinian + 0% Adygei @ 15.6
8 100% Sardinian + 0% Afghan_Hazara @ 15.6
9 100% Sardinian + 0% Afghan_Pashtun @ 15.6
10 100% Sardinian + 0% Afghan_Tadjik @ 15.6
11 100% Sardinian + 0% Afghan_Turkmen @ 15.6
12 100% Sardinian + 0% Afghan_Uzbeki @ 15.6
13 100% Sardinian + 0% Algerian @ 15.6
14 100% Sardinian + 0% Algerian_Jewish @ 15.6
15 100% Sardinian + 0% Altaian @ 15.6
16 100% Sardinian + 0% Anzick-1 @ 15.6
17 100% Sardinian + 0% Armenian @ 15.6
18 100% Sardinian + 0% Ashkenazi @ 15.6
19 100% Sardinian + 0% Assyrian @ 15.6
20 100% Sardinian + 0% Austrian @ 15.6

Remedello culture, RISE486 (2134-1773 BC):

Population
North_Sea 1.76
Atlantic 30.69
Baltic 6.11
Eastern_Euro -
West_Med 45.54
West_Asian -
East_Med 9.48
Red_Sea 5.08
South_Asian -
Southeast_Asian -
Siberian -
Amerindian -
Oceanian -
Northeast_African -
Sub-Saharan 1.34

Oracle results:

Spoiler!

Kit T319214

Admix Results (sorted):

# Population Percent
1 West_Med 45.54
2 Atlantic 30.69
3 East_Med 9.48
4 Baltic 6.11
5 Red_Sea 5.08
6 North_Sea 1.76
7 Sub-Saharan 1.34

Single Population Sharing:

# Population (source) Distance
1 Sardinian 11.96
2 Spanish_Andalucia 24.04
3 Spanish_Aragon 25.04
4 Southwest_French 25.39
5 Spanish_Castilla_La_Mancha 25.49
6 Spanish_Cantabria 25.52
7 Spanish_Valencia 25.81
8 French_Basque 26.93
9 Spanish_Extremadura 27.09
10 North_Italian 27.5
11 Spanish_Murcia 27.58
12 Spanish_Castilla_Y_Leon 27.78
13 Portuguese 28.07
14 Spanish_Cataluna 28.71
15 Spanish_Galicia 28.96
16 Tuscan 30.14
17 West_Sicilian 33.09
18 Greek 34.42
19 Mozabite_Berber 34.91
20 Italian_Abruzzo 35.46

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 75.9% Sardinian + 24.1% French_Basque @ 8.82
2 79% Sardinian + 21% Southwest_French @ 10.25
3 79.5% Sardinian + 20.5% Spanish_Aragon @ 10.41
4 80.9% Sardinian + 19.1% Spanish_Cantabria @ 10.64
5 81.1% Sardinian + 18.9% Spanish_Castilla_La_Mancha @ 10.67
6 80.7% Sardinian + 19.3% Spanish_Andalucia @ 10.8
7 82.1% Sardinian + 17.9% Spanish_Valencia @ 10.81
8 84.9% Sardinian + 15.1% Spanish_Castilla_Y_Leon @ 11.06
9 86.7% Sardinian + 13.3% Spanish_Cataluna @ 11.24
10 86.1% Sardinian + 13.9% Spanish_Murcia @ 11.25
11 85.9% Sardinian + 14.1% Spanish_Extremadura @ 11.25
12 92.8% Sardinian + 7.2% Irish @ 11.42
13 93.5% Sardinian + 6.5% La_Brana-1 @ 11.42
14 93.5% Sardinian + 6.5% Estonian_Polish @ 11.43
15 88.1% Sardinian + 11.9% Portuguese @ 11.45
16 93.4% Sardinian + 6.6% Russian_Smolensk @ 11.45
17 93.2% Sardinian + 6.8% West_Scottish @ 11.46
18 93.8% Sardinian + 6.2% Belorussian @ 11.47
19 92.2% Sardinian + 7.8% Austrian @ 11.48
20 93% Sardinian + 7% Southeast_English @ 11.49

^^^
Modern Albanians could be modelled as a mixture of those three populations:

http://i.imgur.com/OLB7Ogr.png

Quote:

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Originally Posted by Ibericus

https://image.ibb.co/iKFM0F/Sikeliot.png

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I plot more or less halfway between them just as I expected.

Quote:

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Originally Posted by Ibericus

https://image.ibb.co/jSUNqF/Potentia.png

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Nuuu

I'm away from the Spanish cluster!