Plink version = ca. 689,900 SNPs
My VCF version = ca. 1,619,600 SNPs
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Plink version = ca. 689,900 SNPs
My VCF version = ca. 1,619,600 SNPs
OK later I will upload more of them. It works with Y and X or without?
Here is without - https://www.sendspace.com/file/6zo9jf
how many can you get out of these Serbian samples?
https://www.ebi.ac.uk/ena/browser/view/PRJEB42044
I got only around 16,000. They are in gchr38.
Vbnetkhio, where did you find the info which sample is from which Oblast?
I have the following samples extracted from VCF (I will post their K15/K13):
And these samples are in array.zip (they have fewer SNPs, worse distances):Code:EG600001_big
EG600002_big
EG600003_big
EG600004_big
EG600005_big
EG600006_big
EG600007_big
EG600008_big
EG600009_big
EG600010_big
EG600011_big
EG600012_big
EG600013_big
EG600014_big
EG600015_big
EG600016_big
EG600017_big
EG600018_big
EG600019_big
EG600020_big
EG600021_big
EG600022_big
EG600023_big
EG600024_big
EG600025_big
EG600026_big
EG600027_big
EG600028_big
EG600029_big
EG600030_big
EG600031_big
EG600032_big
EG600033_big
EG600034_big
EG600035_big
EG600036_big
EG600037_big
EG600038_big
EG600039_big
EG600040_big
EG600041_big
EG600042_big
EG600043_big
EG600044_big
EG600045_big
EG600046_big
EG600047_big
EG600048_big
EG600049_big
EG600050_big
EG600051_big
EG600052_big
EG600053_big
EG600054_big
EG600055_big
EG600056_big
EG600057_big
EG600059_big
EG600060_big
EG600061_big
EG600062_big
EG600063_big
EG600064_big
EG600065_big
EG600066_big
EG600067_big
EG600068_big
EG600069_big
EG600070_big
EG600071_big
EG600072_big
EG600073_big
EG600074_big
EG600075_big
EG600076_big
EG600077_big
EG600078_big
EG600079_big
EG600080_big
EG600081_big
EG600082_big
EG600083_big
EG600084_big
EG600085_big
EG600086_big
EG600087_big
EG600088_big
EG600089_big
EG600090_big
EG600091_big
EG600092_big
EG600093_big
EG600094_big
EG600095_big
EG600096_big
EG600097_big
EG600098_big
I will post K15, K12b and K13 results for both versions of files (plink and my VCF), so you can compare.Code:EG600002
EG600003
EG600004
EG600005
EG600006
EG600007
EG600008
EG600009
EG600010
EG600011
EG600012
EG600013
EG600014
EG600015
EG600016
EG600017
EG600018
EG600019
EG600020
EG600021
EG600022
EG600023
EG600024
EG600025
EG600026
EG600027
EG600028
EG600029
EG600030
EG600031
EG600032
EG600033
EG600034
EG600036
EG600037
EG600039
EG600040
EG600041
EG600042
EG600043
EG600044
EG600045
EG600046
EG600047
EG600048
EG600049
EG600050
EG600051
EG600052
EG600053
EG600054
EG600056
EG600057
EG600060
EG600061
EG600063
EG600065
EG600066
EG600067
EG600068
EG600069
EG600070
EG600071
EG600073
EG600074
EG600075
EG600076
EG600077
EG600078
EG600079
EG600081
EG600082
EG600084
EG600085
EG600087
EG600088
EG600089
EG600090
EG600091
EG600092
EG600093
EG600094
EG600095
EG600096
EG600097
EG600098
QC_sample(EUR)
But I can already see that files extracted from VCF (= more SNPs) have better distances to populations.
I need to download every sample separately, or is there a combined VCF file with all samples (like in case of these Ukrainians)?
VCF version Ukrainians (I called this version "_big"), Eurogenes K15:
Top 5 distances for each sample:Code:EG600001_big,17.88,21.81,18.58,17.11,8.01,7.05,6.88,0.71,0,0.96,0.20,0,0,0.79,0
EG600002_big,18.89,13.04,23.47,17.52,9.21,7.35,7.42,1.08,0.24,0,0.88,0,0.01,0.55,0.35
EG600003_big,15.85,15.23,25.63,19.31,7.54,9.50,4.93,0,0.60,0,0,0.92,0.49,0,0
EG600004_big,16.96,18.15,21.38,14.36,9.40,3.99,12.58,0.89,0.15,0.77,0.77,0,0.60,0,0
EG600005_big,17.49,19.04,22.97,18.41,8.21,7.14,4.02,1.84,0,0,0,0.01,0.35,0.53,0
EG600006_big,18.49,19.14,26.16,19.26,8.01,3.43,3.44,0,1.07,0.31,0.55,0,0.14,0,0
EG600007_big,20.33,14.42,22.07,15.63,9.38,7.17,8.56,1.41,0.50,0,0.54,0,0,0,0
EG600008_big,19.48,12.29,21.02,13.55,13.12,5.88,9.24,1.13,1.52,0,1.72,0.71,0,0,0.32
EG600009_big,17.13,18.65,24.59,15.88,9.41,5.65,5.45,1.96,0.16,0.27,0.09,0.77,0,0,0
EG600010_big,17.29,15.13,23.70,15.03,9.76,6.44,9.56,0,2.20,0,0,0.72,0,0.18,0
EG600011_big,21.31,12.63,21.31,13.67,13.06,9.71,6.34,0,0,0.41,1.34,0,0.12,0,0.09
EG600012_big,20.68,18.40,22.19,19.47,6.40,7.62,2.97,1.45,0,0,0.02,0.28,0.42,0,0.11
EG600013_big,20.06,17.01,27.79,15.66,6.82,6.76,4.45,0,0.87,0,0,0,0.51,0,0.07
EG600014_big,17.65,21.47,28.26,12.81,5.71,8.49,2.71,1.49,0.29,0,1.12,0,0,0,0
EG600015_big,16.67,16.19,31.42,17.16,6.90,3.29,3.67,0.30,1.79,0.71,0,0.96,0.94,0,0
EG600016_big,15.91,18.64,28.14,17.74,7.12,9.01,0,0,2.22,0,0.05,0.94,0,0.23,0
EG600017_big,18.15,15.36,28.85,23.81,5.86,6.18,0,0,0,0.35,0,0.60,0.85,0,0
EG600018_big,16.33,19.80,22.73,17.37,8.69,7.41,5.14,1.23,0.03,0.55,0.17,0,0.48,0,0.06
EG600019_big,19.54,14.45,20.02,15.58,1.60,11.02,5.83,0.41,0.58,2.34,8.04,0.35,0,0,0.22
EG600020_big,14.77,14.06,27.33,19.90,10.42,5.22,3.43,2.47,1.39,0.74,0,0.20,0.01,0.06,0
EG600021_big,11.09,20.15,31.22,24.81,6.34,5.55,0,0.07,0,0.40,0,0,0.36,0,0
EG600022_big,19.00,13.57,27.75,20.68,8.66,2.02,5.69,0,2.12,0,0,0,0.07,0,0.44
EG600023_big,18.53,18.20,28.53,18.54,7.41,6.16,0.49,0.82,0.34,0,0.42,0.07,0.14,0,0.35
EG600024_big,22.30,18.24,24.79,16.05,6.23,7.01,1.77,0.51,0.99,0,0.57,0.90,0,0.64,0
EG600025_big,14.06,21.93,27.76,22.99,3.95,6.73,1.32,0.38,0.74,0,0,0.14,0,0,0
EG600026_big,19.58,15.10,28.66,20.58,6.51,1.58,4.66,0.50,0.38,0,0.44,0.80,0.30,0,0.89
EG600027_big,21.20,16.05,25.04,11.46,9.39,8.43,6.44,0,0.06,0,0.22,1.70,0,0,0
EG600028_big,19.59,13.56,31.32,19.74,6.08,5.67,2.52,0,0.49,0,1.00,0,0.05,0,0
EG600029_big,19.40,12.39,31.13,19.43,5.82,4.43,1.62,1.45,0.11,1.71,2.51,0,0,0,0
EG600030_big,23.88,12.90,23.19,18.47,10.93,4.39,4.54,0,0.86,0,0,0.75,0.10,0,0
EG600031_big,17.87,17.72,25.42,21.33,5.80,2.64,7.20,0,0.30,0,0,0.29,0.89,0.54,0
EG600032_big,17.82,16.01,23.14,16.09,8.95,9.24,4.62,1.59,1.31,0,0.07,1.17,0,0,0
EG600033_big,14.20,22.64,28.10,15.96,7.07,3.73,6.16,1.69,0.35,0,0.08,0,0,0,0
EG600034_big,24.85,9.85,24.15,18.49,8.22,4.20,7.44,0.59,0,0.75,1.35,0,0.11,0,0
EG600035_big,19.63,18.75,17.20,15.92,10.91,9.22,4.56,2.13,0,0.75,0.19,0.64,0.09,0,0
EG600036_big,20.13,18.81,24.54,14.50,7.47,6.01,5.00,0,0.93,0,1.95,0.37,0,0.03,0.25
EG600037_big,17.85,16.91,32.00,20.94,6.52,0.41,1.70,0,0,0.13,0.80,1.03,0.58,0.36,0.77
EG600038_big,22.05,11.26,28.86,20.85,7.20,5.98,2.24,0.40,0.46,0,0,0,0.70,0,0
EG600039_big,21.70,16.03,27.14,22.48,3.13,4.84,1.81,0,0.03,0,0.50,0.54,0.56,0,1.24
EG600040_big,20.77,15.56,30.11,22.90,4.73,3.37,0.16,0,0.51,0,0.55,0.27,0.23,0,0.85
EG600041_big,18.75,18.24,31.65,19.27,5.74,2.63,0.92,1.01,0.72,0,0.50,0.01,0.30,0.25,0
EG600042_big,22.56,15.62,24.17,22.36,7.50,3.15,2.62,0.48,0.05,0,0,0.84,0.13,0.52,0
EG600043_big,19.77,15.90,26.51,18.14,9.29,3.66,3.99,0,0.26,0,0.48,0.87,0.29,0.57,0.27
EG600044_big,17.11,17.04,29.09,23.22,7.32,1.87,1.75,0.11,0,0,0,0.72,1.22,0.57,0
EG600045_big,20.59,16.03,30.72,17.06,3.98,8.46,1.46,0,0,0,0,0.33,1.10,0,0.27
EG600046_big,18.77,13.15,27.94,20.88,6.46,2.58,6.62,0.95,0.88,1.04,0,0.03,0.14,0.56,0
EG600047_big,13.42,18.70,29.94,18.68,8.44,6.97,2.49,0,0,0,0.04,1.17,0,0.14,0
EG600048_big,12.51,10.67,7.72,5.54,15.60,12.62,25.77,6.40,0,0.38,0,0,0.95,1.40,0.45
EG600049_big,17.97,21.46,29.74,19.93,4.97,2.60,2.90,0.14,0.25,0,0,0.01,0,0,0.05
EG600050_big,18.64,17.46,27.67,19.71,6.44,5.81,1.17,0.42,1.30,0,0,0.07,0.22,0,1.09
EG600051_big,22.18,9.97,27.75,18.83,10.03,2.29,4.88,0,3.20,0,0,0,0.87,0,0
EG600052_big,21.98,9.72,33.00,21.97,4.68,3.83,2.80,0.19,0.42,0,0,0.48,0.59,0,0.34
EG600053_big,18.93,16.44,26.62,19.75,8.77,4.88,2.93,0.72,0,0,0.35,0,0,0.61,0
EG600054_big,21.69,13.05,29.84,20.62,3.94,5.69,2.89,0.53,0.93,0.75,0.06,0,0,0,0
EG600055_big,23.19,10.76,30.28,22.59,5.25,1.95,5.10,0,0,0,0,0,0,0.87,0
EG600056_big,18.82,15.17,31.75,20.51,3.63,6.39,2.33,0.31,0.12,0,0,0.27,0.71,0,0
EG600057_big,22.46,11.48,29.99,21.74,5.23,2.13,2.41,2.41,0.64,0.36,0,0.73,0.42,0,0
EG600059_big,15.76,16.81,32.11,16.89,7.91,3.84,4.11,0,0.50,0,0.95,0.01,1.12,0,0
EG600060_big,24.30,11.32,30.96,18.51,6.09,4.76,0.79,1.01,0.84,0.36,0,0,0.35,0.38,0.32
EG600061_big,19.29,18.19,24.24,17.93,7.14,8.02,3.06,0.59,0,0,0,0.35,0.22,0.95,0
EG600062_big,24.04,12.65,27.66,14.42,7.94,6.35,3.27,1.38,2.10,0,0,0.05,0,0.14,0
EG600063_big,20.22,15.52,32.46,17.31,5.91,5.72,1.11,0.95,0,0,0,0.13,0.67,0,0
EG600064_big,20.83,17.36,26.52,16.24,9.00,2.88,2.19,2.49,0.06,0,1.99,0.31,0,0.13,0.02
EG600065_big,24.53,9.76,27.87,19.28,9.96,3.01,1.64,0.17,1.68,0,0.72,0,0.48,0,0.89
EG600066_big,20.82,12.52,29.63,21.01,5.82,5.63,0.97,0.52,0.93,0.12,1.52,0.51,0,0,0
EG600067_big,19.81,14.84,31.98,25.08,3.27,2.55,0,0.18,0.61,0.32,0.48,0,0,0.84,0.03
EG600068_big,15.82,18.49,32.93,22.24,4.03,4.25,0.81,0.27,0,0,0.21,0,0.45,0,0.49
EG600069_big,22.06,15.60,29.99,20.55,4.63,2.58,3.01,0.32,0,0.46,0,0.54,0.28,0,0
EG600070_big,13.84,16.94,30.04,22.87,5.26,4.04,2.87,0.29,1.19,0.46,0.77,0.82,0.41,0.19,0
EG600071_big,19.89,15.45,28.39,19.94,6.63,4.54,0.98,1.49,0,0,1.46,1.23,0,0,0
EG600072_big,20.02,17.75,26.38,18.74,8.67,4.58,0,0.84,0,0.26,1.46,0.33,0.63,0.34,0
EG600073_big,23.15,11.08,23.70,21.57,5.50,5.00,1.85,2.21,0.41,0.90,4.25,0.21,0,0.18,0
EG600074_big,21.31,15.22,28.11,18.74,6.97,4.53,0.62,0,1.90,0,0.60,0.68,1.09,0,0.24
EG600075_big,23.30,9.95,31.10,24.76,3.77,4.10,0.16,1.31,1.50,0,0,0.05,0,0,0
EG600076_big,21.33,15.28,23.36,16.96,7.29,7.48,4.64,2.16,0,0,0.49,0,0.99,0,0.03
EG600077_big,17.23,18.19,30.88,19.47,5.99,4.64,1.07,0,0,0,0.41,0.60,1.24,0.29,0
EG600078_big,17.43,18.11,31.77,15.97,7.05,0.65,3.23,1.28,2.57,1.41,0,0,0.52,0,0
EG600079_big,18.68,15.49,31.82,18.64,3.56,2.97,6.79,0,0,0,0.29,1.30,0.09,0.37,0
EG600080_big,16.26,18.33,30.17,19.66,5.67,5.88,2.50,0.15,0.25,0.27,0,0.85,0,0,0
EG600081_big,18.85,18.17,30.21,18.83,3.09,2.67,3.56,1.31,2.22,0,0,0,0.34,0.46,0.28
EG600082_big,22.92,16.49,27.97,18.59,4.49,0.88,5.68,0.63,0.03,0,0.03,1.68,0.07,0,0.55
EG600083_big,19.14,16.59,28.44,18.63,7.27,0.95,6.03,0,1.29,0.20,0.95,0.32,0,0,0.20
EG600084_big,17.20,17.36,31.38,21.57,4.77,4.86,0,0.50,1.29,0,0.01,0,0.69,0.09,0.27
EG600085_big,17.31,17.61,28.21,24.19,4.74,5.99,0,0,0.68,1.03,0,0,0.24,0,0
EG600086_big,18.19,15.96,29.97,19.56,4.96,8.14,0.62,0.83,1.18,0,0,0,0,0,0.59
EG600087_big,16.38,16.85,28.81,20.78,5.63,4.33,4.14,0.18,0.36,0,2.16,0.39,0,0,0
EG600088_big,21.33,16.96,31.21,18.63,4.82,3.58,2.01,0,0,0.15,0.48,0.49,0,0.19,0.16
EG600089_big,21.28,15.67,24.00,15.70,8.51,6.04,5.20,0.41,1.70,0.69,0.58,0.02,0.18,0,0
EG600090_big,23.60,11.48,21.70,20.23,6.80,7.47,6.22,1.15,0.62,0,0,0.73,0,0,0
EG600091_big,16.20,14.16,29.33,22.91,5.31,4.68,3.71,0.64,0,0.75,0.71,0,0.39,0,1.21
EG600092_big,24.29,13.37,22.50,20.88,6.52,6.35,1.73,0,3.78,0,0,0.13,0.45,0,0
EG600093_big,11.84,16.09,18.59,15.55,6.15,11.74,13.21,1.50,2.95,0,1.22,0.12,0.36,0,0.69
EG600094_big,23.69,10.40,27.91,22.35,8.14,3.80,0.86,0,1.86,0,0.67,0.32,0,0,0
EG600095_big,21.79,16.56,25.25,17.20,7.92,3.30,5.79,0.49,0.99,0.36,0.35,0,0,0,0
EG600096_big,22.14,13.80,22.29,18.09,8.96,5.24,6.06,0.33,0.44,0.53,0.76,0.71,0.41,0,0.25
EG600097_big,20.82,7.55,23.52,18.87,10.77,6.19,4.95,3.44,3.51,0,0.18,0,0.19,0,0
EG600098_big,18.57,18.26,31.17,18.40,2.54,6.39,2.23,0,1.05,0,0,0.20,0.69,0.48,0.01
Distance to: EG600098_big
3.83031330 Russian_Smolensk
5.25450283 Belorussian
5.33928834 Ukrainian_Kiev_Avg
5.46762288 Ukrainian_Belgorod
5.66639215 Southwest_Russian
Distance to: EG600097_big
9.01164247 Moldavian
9.39529670 Ukrainian_Lviv
10.49275913 Slovak
10.56028586 Croat_Bosnia
11.59686596 Croatian
Distance to: EG600096_big
4.25416468 Slovak
6.32281583 Ukrainian_Lviv
6.46460362 Moldavian
6.48275404 Croatian
7.06387288 South_Polish
Distance to: EG600095_big
3.97267419 Slovak
4.15352862 South_Polish
4.42232970 Sorb_Lusatia
4.79356861 Ukrainian_Lviv
6.38537391 Croatian
Distance to: EG600094_big
7.35834900 Masurian
7.55655345 Ukrainian_Lviv
7.78606447 Ukraine_East
8.55949181 Ukrainian_Kiev_Avg
8.70622766 South_Polish
Distance to: EG600093_big
8.17957212 Romania_Ne
9.25329671 Bosniak
9.67255444 Bosnian
9.73480354 Romania_Nw
10.11895251 Romanian
Distance to: EG600092_big
7.84500478 Ukrainian_Lviv
7.88307047 South_Polish
7.89430575 Slovak
8.30424590 Masurian
8.61744742 Sorb_Lusatia
Distance to: EG600091_big
3.64691651 Ukrainian_Belgorod
3.74714558 Southwest_Russian
5.07000000 Ukrainian_Kiev_Avg
5.44165416 Ukraine_East
5.71781427 Russian_Smolensk
Distance to: EG600090_big
7.67821305 Slovak
8.36285238 Ukrainian_Lviv
8.72959335 Moldavian
9.33582348 South_Polish
9.57191661 Croat_Bosnia
Distance to: EG600089_big
3.29688925 Slovak
4.53177669 Croatian
4.96748427 Ukrainian_Lviv
5.34275210 South_Polish
5.77097512 Slovenian
Distance to: EG600088_big
4.03003722 Ukrainian_Kiev_Avg
4.07035625 Belorussian
4.10394932 Polish
4.42288367 Russian_Smolensk
5.00860260 South_Polish
Distance to: EG600087_big
3.96700139 Russian_Smolensk
4.10411988 Ukrainian_Kiev_Avg
4.44803327 Southwest_Russian
4.76068272 Ukrainian_Belgorod
5.90502329 Estonian_Polish
Distance to: EG600086_big
4.08944984 Ukrainian_Belgorod
4.34441020 Ukrainian_Kiev_Avg
4.78002092 Russian_Smolensk
5.28413664 Southwest_Russian
6.61756753 South_Polish
Distance to: EG600085_big
4.71204839 Ukrainian_Belgorod
4.77062889 Southwest_Russian
5.16937134 Russian_Smolensk
5.60151765 Estonian_Polish
6.70609424 Ukrainian_Kiev_Avg
Distance to: EG600084_big
3.16020569 Russian_Smolensk
3.48584280 Estonian_Polish
4.13639940 Belorussian
4.37346545 Southwest_Russian
4.48563262 Ukrainian_Belgorod
Distance to: EG600083_big
5.65131843 Ukrainian_Kiev_Avg
6.05999175 South_Polish
6.51544319 Polish
6.81912751 Russian_Smolensk
6.92893931 Ukrainian_Lviv
Distance to: EG600082_big
5.71604759 Polish
5.80984509 Sorb_Lusatia
5.96968173 South_Polish
6.83062223 Ukrainian_Lviv
6.88973149 Masurian
Distance to: EG600081_big
3.59773540 Russian_Smolensk
4.04346386 Belorussian
5.06635964 Ukrainian_Kiev_Avg
5.21184228 Estonian_Polish
5.42339377 Polish
Distance to: EG600080_big
3.00577777 Russian_Smolensk
4.17763091 Ukrainian_Kiev_Avg
4.97199155 Ukrainian_Belgorod
5.36607864 Southwest_Russian
5.84545122 Estonian_Polish
Distance to: EG600079_big
5.91345077 Ukrainian_Kiev_Avg
6.29138300 Belorussian
6.50261486 Russian_Smolensk
6.52111187 Southwest_Russian
7.03142944 Ukrainian_Belgorod
Distance to: EG600078_big
6.92465162 Ukrainian_Kiev_Avg
7.15904323 Russian_Smolensk
7.55314504 Belorussian
7.99719326 Estonian_Polish
8.15583227 Polish
Distance to: EG600077_big
2.89987931 Russian_Smolensk
3.93761349 Ukrainian_Kiev_Avg
4.77090138 Estonian_Polish
4.86349668 Belorussian
5.48982696 Southwest_Russian
Distance to: EG600076_big
4.62517628 Slovak
5.44508953 Ukrainian_Lviv
5.56222078 Croatian
5.66784792 South_Polish
6.39958592 Kaykavian_Croatian
Distance to: EG600075_big
7.69822057 Ukraine_East
8.33800336 Southwest_Russian
8.74849701 Ukrainian_Belgorod
9.54535940 Latvian
9.57607957 Estonian
Distance to: EG600074_big
3.60625845 South_Polish
4.12053395 Ukrainian_Kiev_Avg
4.18948684 Ukrainian_Lviv
4.75020000 Polish
5.58537376 Masurian
Distance to: EG600073_big
7.16312111 RU_Pinega
8.21604528 Ukrainian_Lviv
8.81365985 East_Finnish
9.07846903 Masurian
9.07851309 Kargopol_Russian
Distance to: EG600072_big
4.22677182 South_Polish
4.99220392 Polish
5.63500665 Ukrainian_Kiev_Avg
6.17043759 Ukrainian_Lviv
6.32321121 Sorb_Lusatia
Distance to: EG600071_big
2.93388821 Ukrainian_Kiev_Avg
4.30146487 South_Polish
4.61214701 Polish
4.81676240 Russian_Smolensk
5.04643438 Southwest_Russian
Distance to: EG600070_big
5.25498811 Russian_Smolensk
5.34497895 Southwest_Russian
5.45797582 Ukrainian_Belgorod
5.68774999 Estonian_Polish
6.47770021 Ukrainian_Kiev_Avg
Distance to: EG600069_big
4.16001202 Polish
4.48993318 Belorussian
4.54923070 Ukrainian_Kiev_Avg
4.99468718 Southwest_Russian
5.29446881 South_Polish
Distance to: EG600068_big
4.06633742 Estonian_Polish
4.47605853 Russian_Smolensk
4.50499723 Belorussian
5.65234465 Southwest_Russian
5.97503975 Ukrainian_Belgorod
Distance to: EG600067_big
4.62552700 Estonian_Polish
5.18735000 Southwest_Russian
5.21375105 Belorussian
5.29300482 Ukraine_East
6.16530616 Lithuanian
Distance to: EG600066_big
4.63138208 Ukrainian_Kiev_Avg
5.05952567 Ukrainian_Belgorod
5.06524432 Southwest_Russian
5.23199771 Ukraine_East
6.16359473 Ukrainian_Lviv
Distance to: EG600065_big
6.68943944 Ukrainian_Lviv
7.60764090 Masurian
8.93652617 South_Polish
9.45659446 Slovak
9.49360838 Ukrainian_Kiev_Avg
Distance to: EG600064_big
4.52059731 South_Polish
5.10030391 Ukrainian_Lviv
5.60572921 Sorb_Lusatia
6.12929849 Polish
6.13119027 Slovak
Distance to: EG600063_big
4.25207008 Ukrainian_Kiev_Avg
5.83355809 Russian_Smolensk
6.23173331 Belorussian
6.29406069 South_Polish
6.48972264 Ukrainian_Lviv
Distance to: EG600062_big
3.82691782 Ukrainian_Lviv
6.25301172 Slovak
6.66709832 South_Polish
8.06984510 Sorb_Lusatia
8.53842491 Ukrainian_Kiev_Avg
Distance to: EG600061_big
5.15220341 South_Polish
5.82101366 Croatian
6.41039780 Kaykavian_Croatian
6.87140451 Sorb_Lusatia
7.02268863 Slovak
Distance to: EG600060_big
6.02292288 Ukrainian_Lviv
7.36043477 Masurian
7.38558055 Ukrainian_Kiev_Avg
7.71880172 South_Polish
8.08614247 Ukraine_East
Distance to: EG600059_big
5.52602932 Ukrainian_Kiev_Avg
6.55476163 Russian_Smolensk
7.84176638 Ukraine_East
7.89441575 Belorussian
8.25656708 Estonian_Polish
Distance to: EG600057_big
6.17658482 Ukraine_East
6.82200117 Ukrainian_Kiev_Avg
6.90284724 Southwest_Russian
7.31721942 Ukrainian_Lviv
7.47801444 Masurian
Distance to: EG600056_big
2.99000000 Ukrainian_Belgorod
3.47824668 Southwest_Russian
4.06388976 Ukrainian_Kiev_Avg
4.35753371 Russian_Smolensk
4.83832616 Belorussian
Distance to: EG600055_big
7.68180317 Ukraine_East
8.04049750 Southwest_Russian
8.40998216 Ukrainian_Kiev_Avg
8.76704055 Ukrainian_Lviv
8.77793256 Ukrainian_Belgorod
Distance to: EG600054_big
4.68643788 Ukrainian_Belgorod
4.73053908 Southwest_Russian
4.86641552 Ukrainian_Kiev_Avg
6.17864063 Ukrainian_Lviv
6.29821403 South_Polish
Distance to: EG600053_big
3.99469648 South_Polish
4.22867592 Ukrainian_Kiev_Avg
5.55045043 Ukrainian_Lviv
5.59252179 Polish
6.04125815 Russian_Smolensk
Distance to: EG600052_big
6.36394532 Ukraine_East
7.71417526 Southwest_Russian
8.02837468 Ukrainian_Belgorod
8.12373682 Lithuanian
8.16148883 Ukrainian_Kiev_Avg
Distance to: EG600051_big
6.65563671 Ukrainian_Lviv
8.94955865 South_Polish
8.98209886 Ukrainian_Kiev_Avg
9.13459537 Slovak
9.30070965 Ukraine_East
Distance to: EG600050_big
3.59284010 Ukrainian_Kiev_Avg
3.88491956 Russian_Smolensk
4.22445263 South_Polish
4.72672191 Polish
5.22526554 Ukrainian_Belgorod
Distance to: EG600049_big
4.01295402 Russian_Smolensk
5.28139186 Belorussian
5.36869630 Polish
5.39197552 Estonian_Polish
6.58760199 Ukrainian_Kiev_Avg
Distance to: EG600048_big
3.83903634 Ashkenazi
5.88590690 Central_Greek
5.97789261 East_Sicilian
6.02607667 Sicily_Ragusa
6.53091877 Italy_Abruzzo
Distance to: EG600047_big
7.04738959 Russian_Smolensk
7.17069034 Ukrainian_Kiev_Avg
8.33868695 Ukrainian_Belgorod
9.04650209 Southwest_Russian
9.31041889 Estonian_Polish
Distance to: EG600046_big
5.78569788 Ukrainian_Kiev_Avg
6.65326236 Southwest_Russian
6.95682399 Ukrainian_Belgorod
7.11767518 Ukrainian_Lviv
7.21329328 Ukraine_East
Distance to: EG600045_big
5.63853704 Ukrainian_Kiev_Avg
6.42485798 South_Polish
6.53805782 Russian_Smolensk
6.54110082 Ukrainian_Belgorod
7.10888880 Ukrainian_Lviv
Distance to: EG600044_big
4.37698526 Estonian_Polish
5.31900367 Russian_Smolensk
5.44242593 Ukraine_East
5.65138036 Southwest_Russian
5.76616857 Ukrainian_Kiev_Avg
Distance to: EG600043_big
4.00029999 South_Polish
4.58212833 Ukrainian_Lviv
5.12239202 Ukrainian_Kiev_Avg
6.03205682 Slovak
6.19150224 Polish
Distance to: EG600042_big
5.66603036 Masurian
5.84770040 South_Polish
5.97749948 Polish
6.63680646 Sorb_Lusatia
7.16178050 Ukrainian_Lviv
Distance to: EG600041_big
3.31537328 Russian_Smolensk
3.36136877 Belorussian
3.64725924 Estonian_Polish
4.36483677 Ukrainian_Kiev_Avg
4.87926224 Polish
Distance to: EG600040_big
4.00303635 Estonian_Polish
4.01165801 Southwest_Russian
4.42583325 Belorussian
4.85370992 Ukraine_East
5.13613668 Ukrainian_Belgorod
Distance to: EG600039_big
4.46086315 Southwest_Russian
5.09844094 Polish
5.26110255 Ukrainian_Belgorod
5.93989899 Russian_Smolensk
6.11345238 Ukrainian_Kiev_Avg
Distance to: EG600038_big
5.55945141 Ukrainian_Lviv
5.96678305 Ukrainian_Kiev_Avg
6.83754342 Ukrainian_Belgorod
6.84431151 South_Polish
6.86489621 Ukraine_East
Distance to: EG600037_big
3.84546486 Estonian_Polish
4.45812741 Belorussian
4.94639262 Ukraine_East
5.40919587 Russian_Smolensk
5.71558396 Ukrainian_Kiev_Avg
Distance to: EG600036_big
4.81116410 Croatian
4.90708671 Kaykavian_Croatian
5.42873834 Czech
5.68966623 Slovak
5.73915097 Slovenian
Distance to: EG600035_big
6.22629103 Kaykavian_Croatian
6.32923680 Slovenian
6.77934363 Croatian
7.18797607 Austrian
7.55619613 Moldavian
Distance to: EG600034_big
7.69712545 Slovak
7.72224708 Ukrainian_Lviv
9.48298674 Croat_Bosnia
9.81788165 South_Polish
10.13038005 Moldavian
Distance to: EG600033_big
9.12747501 Russian_Smolensk
9.60599813 Croatian
10.01993513 Ukrainian_Kiev_Avg
10.37727324 South_Polish
10.76018123 Polish
Distance to: EG600032_big
3.91983418 Croatian
5.04352060 Moldavian
7.00758106 Slovenian
7.03440829 Kaykavian_Croatian
7.58104886 Slovak
Distance to: EG600031_big
7.40246581 Ukrainian_Kiev_Avg
7.41325839 Russian_Smolensk
7.46619046 South_Polish
7.67947264 Southwest_Russian
7.68417204 Polish
Distance to: EG600030_big
4.81588975 Slovak
6.38457516 Ukrainian_Lviv
7.62899076 South_Polish
8.04843075 Croat_Bosnia
8.17506575 Sorb_Lusatia
Distance to: EG600029_big
4.60633260 Ukrainian_Kiev_Avg
5.23639189 Ukraine_East
5.94922684 Southwest_Russian
6.05846515 Ukrainian_Belgorod
6.68283622 Ukrainian_Lviv
Distance to: EG600028_big
3.15792653 Ukrainian_Kiev_Avg
4.57003282 Ukrainian_Belgorod
4.82480051 Southwest_Russian
4.83073493 Ukraine_East
5.67952463 Russian_Smolensk
Distance to: EG600027_big
6.04216021 Croatian
6.04968213 Slovenian
6.81557041 Hungarian
6.85751650 Slovak
7.18654994 Moldavian
Distance to: EG600026_big
4.29903478 Ukrainian_Kiev_Avg
5.60828851 Polish
5.61326108 Southwest_Russian
5.74952172 South_Polish
5.84686241 Russian_Smolensk
Distance to: EG600025_big
6.89266277 Russian_Smolensk
8.26778084 Ukrainian_Belgorod
8.43601802 Estonian_Polish
8.49939410 Southwest_Russian
9.29875798 Belorussian
Distance to: EG600024_big
4.22021326 South_Polish
4.59090405 Sorb_Lusatia
5.59387593 Slovak
5.94101843 Ukrainian_Lviv
5.99662405 Czech
Distance to: EG600023_big
4.14319925 Ukrainian_Kiev_Avg
4.54809850 Russian_Smolensk
4.63834022 South_Polish
5.29564916 Polish
6.54217089 Ukrainian_Belgorod
Distance to: EG600022_big
6.00742041 Ukrainian_Kiev_Avg
6.84003655 Ukrainian_Lviv
6.88960086 Ukraine_East
7.04663040 South_Polish
7.72725695 Southwest_Russian
Distance to: EG600021_big
9.07016538 Estonian_Polish
9.12743666 Russian_Smolensk
9.84704524 Ukrainian_Belgorod
10.06236553 Southwest_Russian
10.48989990 Belorussian
Distance to: EG600020_big
6.83152252 Ukrainian_Kiev_Avg
8.41230052 Ukraine_East
8.48794439 Ukrainian_Belgorod
8.70967852 Ukrainian_Lviv
8.79228071 Russian_Smolensk
Distance to: EG600019_big
12.67282920 Moldavian
12.83446921 Tatar
13.09606811 Kaykavian_Croatian
13.46217664 Croatian
13.70588469 Szekely
Distance to: EG600018_big
4.40178373 Croatian
6.56035822 Kaykavian_Croatian
7.25955021 Slovenian
8.14100117 Moldavian
8.46682349 Bosniak
Distance to: EG600017_big
4.03208383 Ukrainian_Belgorod
4.25104693 Southwest_Russian
5.67445152 Ukrainian_Kiev_Avg
5.68546392 Russian_Smolensk
5.83337810 Ukraine_East
Distance to: EG600016_big
7.14372452 Russian_Smolensk
7.26258219 Ukrainian_Kiev_Avg
8.12844389 South_Polish
8.16701904 Ukrainian_Belgorod
9.11906245 Southwest_Russian
Distance to: EG600015_big
4.40954646 Ukrainian_Kiev_Avg
5.61075752 Russian_Smolensk
6.69175612 Ukraine_East
6.82361341 Belorussian
7.23361597 Estonian_Polish
Distance to: EG600014_big
9.01052718 South_Polish
9.46683685 Croatian
9.59831235 Russian_Smolensk
9.79606554 Ukrainian_Kiev_Avg
9.79795897 Kaykavian_Croatian
Distance to: EG600013_big
4.01848230 South_Polish
4.86882943 Ukrainian_Lviv
5.44882556 Ukrainian_Kiev_Avg
6.23474137 Sorb_Lusatia
6.68980179 Slovak
Distance to: EG600012_big
6.13360416 South_Polish
6.23343405 Kaykavian_Croatian
6.82969253 Sorb_Lusatia
7.08173123 Slovak
7.15447412 Croatian
Distance to: EG600011_big
4.76133385 Moldavian
5.88560001 Croat_Bosnia
7.14757600 Bosnian
7.43100725 Serbian_Bosnia
7.55638854 Slovenian
Distance to: EG600010_big
4.69513578 Bosniak
4.78956115 Bosnian
4.80746295 Croatian
5.05433477 Moldavian
5.17151513 Serbian_Bosnia
Distance to: EG600009_big
3.19197431 Croatian
6.25063258 Slovenian
6.58679740 Kaykavian_Croatian
7.17921305 South_Polish
7.51055258 Czech
Distance to: EG600008_big
4.72491270 Moldavian
4.86453685 Serbian_Bosnia
4.96281044 Croat_Bosnia
4.97403753 Bosnian
6.30644115 Bosniak
Distance to: EG600007_big
3.48101997 Moldavian
4.55889241 Croatian
4.99259639 Serbian_Bosnia
5.04786582 Bosnian
5.64496568 Croat_Bosnia
Distance to: EG600006_big
4.67655856 South_Polish
5.16202480 Polish
5.66705391 Ukrainian_Kiev_Avg
5.78427178 Russian_Smolensk
6.16473844 Sorb_Lusatia
Distance to: EG600005_big
4.88932511 Croatian
6.47041730 Kaykavian_Croatian
7.04199546 South_Polish
7.63297049 Slovenian
8.09840499 Slovak
Distance to: EG600004_big
5.14993871 Serbian_Bosnia
5.67309439 Bosniak
6.23415613 Bosnian
6.41809162 Romania_Nw
6.72119781 Romania_Ne
Distance to: EG600003_big
7.47450333 Croatian
7.49545863 Ukrainian_Kiev_Avg
7.68238244 Ukrainian_Belgorod
8.31385590 Moldavian
8.32867336 South_Polish
Distance to: EG600002_big
4.17910277 Moldavian
5.52553165 Croatian
7.11874727 Bosnian
7.21180759 Serbian_Bosnia
7.24001765 Slovak
Distance to: EG600001_big
5.29578134 Austrian
5.87778870 Kaykavian_Croatian
6.88409762 Croatian
7.36015782 Slovenian
8.71401744 Czech
Plink version ("_small"), Eurogenes K13:
Soon I will post also K13 for VCF version and K15 for plink version.Code:EG600002_small,16.59,41.12,15.78,9.92,10.90,1.13,1.06,0,1.75,0.32,0.69,0.75,0
EG600003_small,30.08,33.63,9.51,7.84,12.60,0,0.46,3.46,0.52,0,0.71,0,1.20
EG600004_small,25.09,37.43,12.75,2.53,17.34,0,0.36,1.87,2.63,0,0,0,0
EG600005_small,25.54,39.61,10.24,7.57,12.91,0.01,0,0.17,1.40,0,1.22,0,1.33
EG600006_small,29.47,43.40,10.83,1.71,11.32,0,0,0,3.04,0,0.23,0,0
EG600007_small,29.40,36.55,13.38,5.61,11.27,0.53,0,0,3.11,0,0.16,0,0
EG600008_small,26.35,28.09,19.22,8.31,10.31,0,5.23,1.20,0,1.30,0,0,0
EG600009_small,29.29,37.99,12.71,4.42,11.79,0,0.53,0.95,0,1.23,0,0,1.10
EG600010_small,22.98,35.34,13.37,7.75,13.98,0,5.03,0,0,0.74,0,0,0.80
EG600011_small,21.41,36.47,17.25,9.29,12.50,0,0,0.17,0,2.38,0.53,0,0
EG600012_small,26.46,39.32,11.89,3.15,13.45,1.02,3.09,0,0,1.24,0.38,0,0
EG600013_small,26.96,38.90,11.01,6.18,11.59,0.90,1.32,0,1.41,0,1.26,0,0.46
EG600014_small,28.51,41.63,10.08,7.72,6.79,0.08,0.73,0.12,2.77,0.62,0.11,0.83,0
EG600015_small,20.85,49.86,9.80,1.11,13.37,0,0.45,2.04,0,1.11,0.37,0,1.04
EG600016_small,29.80,40.01,13.68,10.82,0,0,1.88,0,0,1.09,0.94,0.81,0.96
EG600017_small,18.86,48.44,13.88,11.17,0.36,2.03,0,1.96,0,1.77,1.53,0,0
EG600018_small,21.46,40.22,15.18,11.88,4.07,2.06,0.21,0,2.36,0,0.54,1.81,0.21
EG600019_small,23.08,35.78,8.82,13.37,3.05,2.09,1.72,2.46,7.49,0.17,0,1.98,0
EG600020_small,22.36,41.96,14.40,4.38,10.19,0.04,5.90,0,0.67,0,0.11,0,0
EG600021_small,19.38,50.43,13.15,10.03,2.53,0,0,1.25,2.29,0,0.81,0,0.14
EG600022_small,22.47,42.15,15.69,3.99,10.24,0,3.22,0,0,0,0,0,2.25
EG600023_small,31.78,41.70,10.31,11.07,1.88,0,0.02,1.44,0,0.06,0.78,0,0.95
EG600024_small,21.19,40.64,13.20,11.59,6.70,0.63,2.50,0.03,0.37,2.27,0.88,0,0
EG600025_small,28.51,47.55,6.60,8.47,2.47,2.06,0.49,0.45,0,1.03,0.90,1.47,0
EG600026_small,26.07,44.09,13.85,7.61,3.81,0,0.76,0.95,0.63,1.12,1.13,0,0
EG600027_small,26.54,36.85,9.93,10.39,10.32,0,3.89,0.74,0,0.37,0.98,0,0
EG600028_small,33.17,45.55,5.41,9.24,2.27,0,0,1.46,1.80,0,0.06,1.05,0
EG600029_small,18.28,49.71,6.08,8.90,6.60,2.11,0,0.99,3.23,2.32,1.48,0.31,0
EG600030_small,30.10,36.58,14.80,5.18,8.53,0,3.31,0,0,0.71,0.78,0,0
EG600031_small,27.31,45.69,8.69,4.00,10.30,0,0,0.62,0.80,0.79,1.79,0,0
EG600032_small,24.48,39.24,14.39,9.77,5.18,2.46,2.24,0,1.19,0,1.05,0,0
EG600033_small,26.20,40.74,14.58,3.60,12.79,0,0,0.92,0.25,0,0.91,0,0
EG600034_small,16.89,45.05,13.40,5.38,13.27,0,0,2.70,3.14,0.17,0,0,0
EG600036_small,32.09,34.22,10.08,10.58,5.76,0,2.37,0.78,3.05,0,0,0.56,0.52
EG600037_small,29.71,46.58,11.28,3.61,2.19,0,0,0,1.95,0.68,2.61,1.40,0
EG600039_small,37.09,44.03,5.60,4.22,1.95,0,1.83,0,0.04,2.49,1.15,1.61,0
EG600040_small,24.17,50.33,11.70,4.32,3.61,0,2.85,1.16,0.66,0.64,0,0.58,0
EG600041_small,24.47,50.20,11.41,3.47,5.94,0.12,1.26,0,1.83,0.37,0.69,0.24,0
EG600042_small,29.51,41.47,12.19,9.03,3.69,0.61,1.94,0,0,1.56,0,0,0
EG600043_small,23.42,44.53,13.99,4.93,4.83,2.62,0.15,0.78,2.70,1.85,0,0.21,0
EG600044_small,29.29,43.81,7.84,5.94,8.69,0.02,0,0.95,0,0.82,1.69,0,0.95
EG600045_small,33.74,40.83,11.62,4.55,4.20,0,0.62,0.51,0.80,1.29,1.14,0.69,0
EG600046_small,21.73,45.17,9.24,3.01,13.23,0.65,3.09,2.16,0.57,0,0,1.15,0
EG600047_small,19.22,49.95,14.65,3.97,9.93,0,0,0,0.28,0.92,0.54,0.53,0
EG600048_small,13.61,10.58,21.40,13.74,34.07,2.68,0.25,0,0,0.03,1.70,1.38,0.56
EG600049_small,28.16,47.58,7.12,5.61,7.58,0,0.84,1.10,1.48,0,0,0,0.54
EG600050_small,25.45,47.00,10.44,9.21,4.01,0,1.20,0,2.15,0,0.03,0.53,0
EG600051_small,25.05,42.29,13.00,5.75,7.33,0,3.47,0.75,0,0.66,1.70,0,0
EG600052_small,19.68,54.57,8.79,4.02,10.43,0.10,0,0.32,0.46,0.70,0.94,0,0
EG600053_small,30.32,40.43,12.64,5.77,5.01,2.47,0,0.11,2.91,0,0,0.33,0
EG600054_small,29.67,43.62,4.80,11.26,6.54,0,1.13,1.05,1.62,0,0.32,0,0
EG600056_small,19.57,55.88,7.70,5.67,8.53,0,0,0,0.22,2.15,0.29,0,0
EG600057_small,21.54,50.58,11.59,2.63,7.25,1.89,1.83,0,0.94,0.63,1.08,0,0.03
EG600060_small,21.24,47.35,11.90,5.34,7.00,1.77,2.05,0,1.82,0,1.53,0,0
EG600061_small,25.48,42.80,11.03,8.70,8.57,0,0,0,0,0.90,0.43,0.56,1.52
EG600063_small,24.01,45.04,11.98,7.87,5.98,1.16,0.50,1.38,0,1.42,0.65,0,0
EG600065_small,27.60,45.92,12.07,4.31,3.22,0,2.83,0,0.81,0.92,0.79,1.02,0.50
EG600066_small,25.90,45.51,10.10,10.10,0.55,3.22,3.37,0,1.00,0.24,0,0,0
EG600067_small,27.44,51.76,7.23,5.25,0,0.18,2.81,0.97,2.54,0,0.20,1.62,0
EG600068_small,23.43,51.46,7.08,8.62,5.30,1.73,0,0.84,0,0.30,1.25,0,0
EG600069_small,26.72,48.39,11.66,5.25,3.66,1.26,0.05,1.07,0,1.67,0,0.26,0
EG600070_small,21.30,46.78,11.17,6.01,7.68,0.42,3.75,0,1.23,0,1.65,0,0
EG600071_small,19.93,47.17,11.84,9.19,6.37,0,0,0,2.96,1.78,0.42,0.34,0
EG600073_small,28.18,43.79,4.63,11.26,2.81,2.14,0,1.32,4.61,0.69,0,0.56,0
EG600074_small,31.38,40.71,12.77,1.97,5.09,1.07,2.92,0,3.00,0.75,0,0.33,0
EG600075_small,21.97,53.69,5.42,8.19,3.78,1.42,4.13,0,1.07,0,0,0.33,0
EG600076_small,26.01,32.18,13.44,12.87,10.33,3.17,0,0,0,0,1.99,0,0
EG600077_small,31.24,46.49,6.10,5.38,5.86,0.37,0,1.35,0,1.05,0.96,1.19,0
EG600078_small,28.42,42.85,9.84,0,7.79,4.00,0.66,0,3.45,0.71,1.76,0,0.52
EG600079_small,29.28,42.99,6.52,5.97,10.80,0.51,0.68,0,0.67,2.59,0,0,0
EG600081_small,29.98,42.78,7.45,4.00,4.89,1.98,6.18,0.51,0,0.33,1.45,0.46,0
EG600082_small,22.55,47.79,11.86,1.01,12.65,0,0,0,0,2.11,0.88,0.90,0.24
EG600084_small,21.74,51.79,6.92,8.01,5.26,3.08,0,0,0.96,0,1.60,0.20,0.45
EG600085_small,24.36,50.77,8.69,11.86,1.47,0,1.15,1.21,0,0,0.48,0,0
EG600087_small,21.63,48.89,8.39,6.74,8.33,1.32,2.39,0,1.29,0.59,0.44,0,0
EG600088_small,23.64,51.57,9.94,5.58,5.39,0,0,0.30,1.81,0.10,0,0.21,1.47
EG600089_small,34.25,33.34,10.64,9.29,7.42,0.87,0,0.30,2.97,0,0.92,0,0
EG600090_small,30.48,36.99,8.43,11.68,5.47,3.94,0.52,0,0.74,1.38,0.37,0,0
EG600091_small,20.97,45.53,12.61,10.77,3.62,0,0,0,3.32,0,2.21,0.45,0.52
EG600092_small,31.82,41.89,12.02,4.08,3.76,0,2.49,0,1.87,2.06,0,0,0
EG600093_small,21.12,28.20,13.10,15.78,10,2.62,5.57,0,0.58,1.48,1.50,0,0.05
EG600094_small,29.79,45.80,9.11,9.64,0,0,3.03,0,1.96,0.22,0,0.39,0.06
EG600095_small,26.02,40.91,10.73,6.22,10.19,2.41,0.61,0,2.85,0,0.06,0,0
EG600096_small,17.41,41.33,16.81,8.16,10.69,0,0,2.85,0.44,1.09,1.17,0,0.05
EG600097_small,23.04,36.52,17.37,9.46,6.88,1.74,3.30,0,0.44,0,1.00,0,0.25
EG600098_small,32.73,44.72,7.14,1.80,6.34,0.02,1.63,2.51,0.74,1.25,0.01,0,1.12
QC_sample(EUR)_small,54.79,25.93,5.23,6.23,3.73,0,2.19,0.12,0,0.05,0.28,1.45,0