Gedmatch calculators on Vahaduo

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10-12-2020, 02:16 PM
smd555

Why is there such a big discrepancy in admixture calculations between G25 and other calculators? For example: I decided to calculate the percentage of WHG, EHG and CHG in Bronze Age samples. I took Loschbour as WHG pattern, RUS_Samara_HG as EHG pattern, and KK1_Georgia_Kotias as CHG pattern. Analyzed sample - RUS_Srubnaya_Alakul.
In K13 component EHG is absent:

Target: mur003_Russia_Srubnaya_Alakul.SG_3734_ybp
Distance: 6.6203% / 6.62029564
79.0 Loschbour_Loschbour_Luxembourg_6000_BC
21.0 KK1_Georgia_Kotias.SG_9720_ybp

The same is in MDLP K16:

Target: Srubnaya
Distance: 13.8571% / 13.85714509
57.0 Luxembourg_Mesolithic
43.0 Kotias

But in G25 EHG component prevails:

Target: RUS_Srubnaya_Alakul_MLBA:mur003
Distance: 10.4590% / 0.10458963
45.0 RUS_Samara_HG
39.0 GEO_CHG
16.0 LUX_Loschbour

Why is it so?
10-12-2020, 02:35 PM
Leto

New averages for Dodecad (credits to @Amon). Delete the old Palestinian (NOT Palestinian_Christian), Syrian and Lebanese.

Code:

Palestinian,10.56,0.37,5.76,0.15,13.25,1.89,0.65,4.58,24.15,0.45,36.51,1.63 Lebanese_Muslim,12.64,0.17,3.82,0.3,14.77,3.6,0.74,2.19,20.65,0.16,40.46,0.47 Syrian_A,11.83,0.33,4.05,0.21,14.44,3.27,1.23,2.60,20.79,0.38,39.83,1.04 Syrian_B,15.65,0.34,3.52,0.20,13.75,4.80,1.31,2.25,17.73,1.28,37.85,1.35
10-12-2020, 02:41 PM
Aren

Quote:

Originally Posted by Leto

New averages for Dodecad (credits to @Amon). Delete the old Palestinian (NOT Palestinian_Christian) and Lebanese.

Code:

Palestinian,10.56,0.37,5.76,0.15,13.25,1.89,0.65,4.58,24.15,0.45,36.51,1.63 Lebanese_Muslim,12.64,0.17,3.82,0.3,14.77,3.6,0.74,2.19,20.65,0.16,40.46,0.47

Also add this

Code:

Lebanese_Christian,10.7,0,4.03,0.17,15.63,0.86,0.31,0.98,23.73,0.12,43.46,0
10-12-2020, 03:25 PM
Lucas

Quote:

Originally Posted by DontFxxkWithWendy

Do you have the K13 results for the averaged Pennsylvania Dutch as well?

Maybe someone who sent me it, read it and will send it for K13.
10-12-2020, 04:24 PM
Aren

Kurdish Jew, N=13

Code:

Kurdish_Jew,17.67,0.16,2.3,0.22,10.34,1.04,0.96,0.38,21.72,0.07,45.13,0

Distance to: Kurdish_Jew
1.12187343 Iraqi_Jew
1.82057683 Iranian_Jew
3.17557869 Mandean
3.30331652 Assyrian_South
3.77049068 Azeri_Jew
3.90358809 Assyrian_West
3.92754376 Assyrian_North
4.43773591 Mountain_Jew_Chechnya
7.96421999 Armenian_West
8.68984465 Nusayri_Turkey
8.77953871 Georgia_Jews
8.93072226 Iraqi_Baghdad
8.96122759 Lebanese_Muslim
9.33982869 Lebanese_Christian
9.70520031 Syrian_A
10.35334728 Syrian_B
10.71498017 Palestinian_Christian
10.94196509 Armenian_East
10.94434100 Syria_SW_Christian
10.96573755 Turkmen_Iraq
11.60349947 Syrians
11.87118360 Turk_East
12.59842054 Zaza
12.85080931 Kurd_Sorani
12.96708525 Udi_Azerbaijan
13.13223807 Palestinian_Muslim
10-12-2020, 04:57 PM
Leto

Quote:

Mountain_Jew_Chechnya

It's incorrect, the average wasn't based specifically on samples from Chechnya. Waam made it and he never specified that. Lucas, remove "Chechnya" from the title, Mountain is enough.
10-13-2020, 02:58 PM
harutsafaryan07

Updated East Armenian for MDLP K23b

Armenian_East,0.38,1.80,19.87,0.30,0.99,0.11,0.09, 47.24,0.13,0.07,0.09,9.10,0.03,0.44,0.13,13.33,2.8 8,0.29,0.03,0.07,0.01,0,2.45
10-15-2020, 12:25 PM
Leto

Lukasz, please add these to Dodecad besides what's in my last message

made by Amon

Code:

Turk_Cyprus,8.76,0.58,3.06,0.28,18.92,7.35,0.47,1.77,15.8,1.12,40.51,1.23

An alternative Lak average, I don't know which one is better and no one else does either

Code:

Lak2,25.90,2.40,0.04,0.39,4.76,24.19,0.98,0.11,2.94,0.26,38.02,0
10-15-2020, 05:41 PM
Amon

New Turkish Cypriot average (N=45) for Eurogenes K13

Code:

Turk_Cyprus,8.61,6.32,17.83,20.46,33.96,6.32,1.13,1.48,1.17,0.38,0.03,1.57,0.73
10-15-2020, 05:52 PM
Mingle

Quote:

Originally Posted by harutsafaryan07

Updated East Armenian for MDLP K23b

Armenian_East,0.38,1.80,19.87,0.30,0.99,0.11,0.09, 47.24,0.13,0.07,0.09,9.10,0.03,0.44,0.13,13.33,2.8 8,0.29,0.03,0.07,0.01,0,2.45

Quote:

Originally Posted by Amon

New Turkish Cypriot average (N=45) for Eurogenes K13

Code:

Turk_Cyprus,8.61,6.32,17.83,20.46,33.96,6.32,1.13,1.48,1.17,0.38,0.03,1.57,0.73

Do you think you guys could make some West Asian averages for HarappaWorld? It has almost the same components as K12b so is on par with it and one of the best calcs for Asians, so it'd be nice to have some more averages for it.