Gedmatch calculators on Vahaduo

Printable View

Show 40 post(s) from this thread on one page

03-13-2021, 03:52 PM
Lucas

Quote:

Originally Posted by JohnnyP

Macedonian average Central & South from 55 samples,

Code:

Macedonian_Central&South,22.62,19.59,20.57,10.96,22.05,2.43,0.24,0.33,0.34,0.48,0.38,0.05,0.03

Macedonian average East from 25 samples,

Code:

Macedonian_East,23.05,20.90,22.22,10.85,19.19,1.96,0.29,0.36,0.55,0.30,0.32,0.05,0.07

Macedonian average West from 25 samples,

Code:

Macedonian_West,22.88,21.87,20.69,9.06,21.29,2.32,0.24,0.46,0.44,0.27,0.32,0.03,0.12

Macedonian average North from 25 Samples,

Code:

Macedonian_North,21.63,22.44,18.77,11.00,22.13,2.26,0.23,0.27,0.42,0.41,0.33,0.02,0.04

Macedonian average was with many more kits, here not because many kits are without region info.
But this is final update from me, if you want add them if it is not too much :)

Nice, I will add and ask you by PM of some new samples:)

Here is their older avereages PCA position in K36. As we see there is quite big difference between south and the rest. Using one average would be not good.

https://i.imgur.com/Nr8uuOs.png
03-13-2021, 03:58 PM
JohnnyP

Quote:

Originally Posted by Lucas

Nice, I will add and ask you by PM of some new samples:)

Here is their older avereages PCA position in K36. As we see there is quite big difference between south and the rest. Using one average would be not good.

https://i.imgur.com/Nr8uuOs.png

Yeah , That's from South also from Central, it seems that Central Macedonians are even more southern than South Macedonians from many kits :D
03-14-2021, 12:09 PM
Leto

Russian average for D K12b based on the exact same samples I used for Eu K13

Code:

Russian,4.18,4.88,0.14,0.28,20.22,57.75,0.91,0.03,0.96,0.79,9.83,0.04 Distance to: Russian 2.84608503 Russian_Ryazan 2.91106510 Russian_Tver 2.95382802 Russian_Kostroma 3.37807638 Mordovian 4.06107129 Russian_Oryol 4.24417248 Russian_Kursk 4.46570263 Russian_Smolensk 4.65254769 Belarus_Minsk 4.86305460 Russian_Voronezh 4.89894887 North_Russian 4.94236785 Belorussian 5.53097641 Polish_Mazovia 5.85894188 Ukrainian 6.20722966 Russian_Ural 6.92492599 Polish 7.41000000 Polish_Warmia-Masuria 7.82536261 Estonian 8.38371040 Russian_Arkhangelsk 9.05434702 Sorb_Lusatia 9.20510185 Karelian Distance to: Russian 0.48771658 55.80% Belorussian + 44.20% Russian_Ural 0.63059507 58.20% Russian_Smolensk + 41.80% Russian_Ural 0.83093906 57.40% Belarus_Minsk + 42.60% Russian_Ural 0.94382139 41.00% Russian_Arkhangelsk + 59.00% Ukrainian 1.01657948 53.00% Polish_Mazovia + 47.00% Russian_Ural 1.04770253 58.60% Russian_Kostroma + 41.40% Russian_Oryol 1.08457895 45.00% North_Russian + 55.00% Russian_Oryol 1.20947373 60.20% Russian_Kostroma + 39.80% Russian_Kursk 1.25408709 61.60% Russian_Kostroma + 38.40% Russian_Smolensk 1.25642770 48.80% Russian_Kostroma + 51.20% Russian_Ryazan 1.26909003 46.20% North_Russian + 53.80% Russian_Kursk 1.31264749 41.00% Belarus_Minsk + 59.00% Mordovian 1.41167577 45.40% Mordovian + 54.60% Russian_Tver 1.41376192 54.80% North_Russian + 45.20% Ukrainian 1.45178494 60.80% Polish_Mazovia + 39.20% Russian_Arkhangelsk 1.51635204 55.00% Polish + 45.00% Russian_Arkhangelsk 1.63743806 47.00% Polish + 53.00% Russian_Ural 1.63908127 49.80% North_Russian + 50.20% Russian_Voronezh 1.69067134 58.60% Mordovian + 41.40% Russian_Smolensk 1.72112336 38.60% Belorussian + 61.40% Mordovian

I'm planning to replace Mordovian for K13 but I currently don't have the data on my PC and the person who gave it to me has deleted it, so it'll take some time (not that it's important at all ;))
03-14-2021, 02:28 PM
J. Ketch

New German K13 averages that I posted on the German thread. You can replace the current German and North German averages with these if you like (they're pretty similar), the German_West average should stay though.

Code:

German,43.00,27.31,13.88,5.81,6.40,0.94,0.94,0.15,0.34,0.46,0.36,0.15,0.13 German_Northwest,48.15,27.06,11.62,5.35,3.94,0.84,1.28,0.13,0.43,0.44,0.40,0.15,0.14 German_South,41.78,22.89,16.36,6.24,9.41,1.09,0.52,0.25,0.31,0.42,0.38,0.18,0.11
03-16-2021, 07:47 AM
J. Ketch

Quote:

Originally Posted by Lucas

Added :)

I think you've deleted Dutch South from K13 Lucas, and have a duplicate one in K15.

Here they are again

K13

Code:

Dutch_South,45.96,23.36,15.21,5.01,5.67,1.35,0.94,0.38,0.56,0.54,0.29,0.35,0.31

K15 (right one)

Code:

Dutch_South,33.18,25.80,10.33,8.52,11.45,3.77,3.20,1.23,0.69,0.26,0.36,0.42,0.18,0.29,0.23
03-16-2021, 02:04 PM
J. Ketch

Also a Belgian K15 average based on 14 kits, that gets closer distances to surrounding areas than the current Belgium average

Code:

Belgian,32.55,26.03,10.30,8.21,11.03,4.08,5.01,1.04,0.62,0.06,0.04,0.36,0.20,0.30,0.09

Code:

Distance to: Belgian 2.07424685 Dutch_South 3.32234857 Afrikaner 3.61005540 French_North-East 4.23823076 French_Brittany 4.72935514 West_German 4.87699703 Pennsylvania_Dutch 5.00996008 German_Bavarian 5.14192571 English_Southeast 5.67682129 Swiss_German 5.70651382 English_Midlands Distance to: Belgium 3.45405559 Dutch_South 4.06038176 French_North-East 4.10321825 French_Brittany 4.35014942 Afrikaner 5.06957592 English_Southeast 5.34652223 German_Bavarian 5.70751259 English_Midlands 5.82640541 English 5.95696231 West_German 5.98311792 English_Southwest
03-16-2021, 09:18 PM
Lucas

Quote:

Originally Posted by Creoda

I think you've deleted Dutch South from K13 Lucas, and have a duplicate one in K15.

Here they are again

K13

Code:

Dutch_South,45.96,23.36,15.21,5.01,5.67,1.35,0.94,0.38,0.56,0.54,0.29,0.35,0.31

K15 (right one)

Code:

Dutch_South,33.18,25.80,10.33,8.52,11.45,3.77,3.20,1.23,0.69,0.26,0.36,0.42,0.18,0.29,0.23

Quote:

Also a Belgian K15 average based on 14 kits, that gets closer distances to surrounding areas than the current Belgium average

Fixed
03-17-2021, 07:05 PM
Leto

Lucas, I requested some renaming, please do it. I want some consistency in the names of the references :)
03-18-2021, 08:36 PM
vbnetkhio

Quote:

Originally Posted by Lucas

Fixed

I think your inbox is full, so I'll ask you here, do you know about these samples?

http://gigadb.org/dataset/view/id/10...id/File_page/1

it's more than 100 Polish Iron age samples. (without the ones with "77 genomes" in the name, those are microbe samples)
the download links don't work for me.
03-18-2021, 08:58 PM
Lucas

Quote:

Originally Posted by vbnetkhio

I think your inbox is full, so I'll ask you here, do you know about these samples?

http://gigadb.org/dataset/view/id/10...id/File_page/1

it's more than 100 Polish Iron age samples. (without the ones with "77 genomes" in the name, those are microbe samples)
the download links don't work for me.

There are Wielbark genomes here among others, but I didn't know this location. Before it was on ENA only.

Show 40 post(s) from this thread on one page