Running Gedmatch calculators on the command line with stevenliuyi/admix

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10-25-2021, 08:22 PM
vbnetkhio

Quote:

Originally Posted by Komintasavalta

Here's averages from Cardona et al. 2014 ("Genome-Wide Analysis of Cold Adaptation in Indigenous Siberian Populations") (https://www.ncbi.nlm.nih.gov/geo/que...i?acc=GSE73996):

Code:

#K13 Altai_Teleut,6.66,15.17,0.01,8.69,0.00,0.22,2.51,19.64,42.30,3.62,0.63,0.35,0.21 Komi_Siberian,15.73,44.89,2.09,4.75,0.37,0.21,1.90,0.73,26.20,2.52,0.30,0.11,0.19 Nenets_Forest,1.42,19.73,0.00,1.58,0.00,0.04,3.21,0.97,67.21,5.01,0.54,0.02,0.28 Nenets_Tundra,1.70,18.42,0.21,1.76,0.00,0.04,3.69,1.67,67.12,4.84,0.32,0.11,0.13 #K15 Altai_Teleut,6.41,1.97,3.05,15.08,0.00,5.36,0.00,0.10,2.71,19.81,41.05,3.52,0.54,0.20,0.21 Komi_Siberian,13.71,8.14,16.28,28.19,0.75,1.23,0.08,0.02,1.80,0.94,25.73,2.69,0.28,0.06,0.11 Nenets_Forest,2.28,0.19,1.11,21.88,0.00,0.03,0.00,0.00,2.46,0.99,65.88,4.52,0.46,0.03,0.15 Nenets_Tundra,3.15,1.60,2.00,20.69,0.12,0.27,0.00,0.03,2.90,1.63,62.83,4.38,0.28,0.05,0.06 #K12b Altai_Teleut,8.46,33.04,0.12,2.22,3.20,17.97,1.45,0.02,0.09,30.88,2.32,0.24 Komi_Siberian,6.10,27.21,0.12,0.05,10.35,46.18,1.16,0.13,0.32,4.61,3.73,0.03 Nenets_Forest,4.22,65.36,0.00,0.03,0.05,19.28,0.83,0.01,0.00,10.18,0.02,0.03 Nenets_Tundra,3.73,61.84,0.03,0.17,1.16,20.90,0.83,0.03,0.07,10.57,0.60,0.07

The only samples which I omitted from the averages were the one Tundra Nenets sample and one Forest Nenets sample which plot the furthest right here:

https://i.ibb.co/f42VqCV/cold.png

I have made a library for shells where I have functions with 1-4 letter names for performing most common tasks. So I actually ran the calculators using a oneliner like this:

Code:

x=cold;p Teleut Forest_Nentsi Komi Tundra_Nentsi|rp g/f/karafetpop>$x.pick;keep2 g/p/karafet $x;rmm $x.23;zs 2 $x.fam|, "plink --bfile $x --keep <(awk '\$2==x' x={} $x.fam) --recode 23 --out $x.23/{}";for c in K13 K15 K12b;do rmm $x.$c;p $x.23/*.txt|, "admix -f {} -m $c|grep %>$x.$c/{/.}";for f in $x.$c/*;do rr \ <$f|rc %|jk|aak `be<<<$f`;done|a1k '{print a[$1]":"$0}' <(-sk<g/f/karafetpop) -|nats>g/calc/$x.$c;1nk g/calc/$x.{i,c}|r ':[^,]*'|tav ,|nats>g/calc/$c.$x.a;done

could you run the Greek and Polish from here?
https://data.mendeley.com/datasets/ckz9mtgrjj/3
10-25-2021, 08:59 PM
Komintasavalta

Here's regional Russian and Bashkir averages of samples from the Reich dataset. Most Russian samples and all Bashkir samples are from Jeong et al. 2019, "The genetic history of admixture across inner Eurasia": https://edmond.mpdl.mpg.de/imeji/col...os=1#pageTitle.

Code:

#K13 Bashkir_Central,15.62,31.86,3.18,12.28,3.04,0.74,3.55,5.38,21.16,2.23,0.37,0.24,0.36 Bashkir_North,17.02,34.88,3.72,10.72,2.30,0.60,3.84,4.42,19.44,1.86,0.59,0.23,0.37 Bashkir_South,12.74,24.86,1.24,13.47,1.17,0.30,4.19,9.63,28.68,2.98,0.34,0.16,0.24 Russian_Arkhangelsk_Krasnoborsky,28.17,47.65,5.02,4.22,1.93,0.57,2.25,0.86,7.69,0.93,0.46,0.26,0.01 Russian_Arkhangelsk_Leshukonsky,25.10,48.98,2.01,4.33,0.96,0.39,1.44,0.32,12.82,1.83,0.75,0.53,0.54 Russian_Arkhangelsk_Pinezhsky,26.31,51.18,3.49,2.79,1.01,0.17,2.28,0.32,9.31,1.84,0.56,0.56,0.22 Russian_Belgorod,23.68,47.78,11.25,5.76,5.85,1.50,0.81,0.68,1.32,0.68,0.28,0.34,0.06 Russian_Kaluga,28.40,48.45,6.76,4.02,5.78,1.72,1.10,0.00,2.06,1.15,0.24,0.00,0.34 Russian_Kursk,26.62,47.79,7.60,4.82,7.36,0.36,0.93,0.76,1.91,0.90,0.37,0.41,0.18 Russian_Orel,27.52,44.96,8.03,6.18,6.28,1.08,1.24,0.72,2.32,0.85,0.16,0.34,0.33 Russian_Pskov,27.00,53.07,7.78,4.50,1.25,1.69,0.54,0.03,1.87,0.73,0.58,0.45,0.50 Russian_Ryazan,24.89,47.15,8.72,7.10,4.48,0.69,1.67,0.40,2.97,0.99,0.32,0.39,0.23 Russian_Smolensk,26.22,48.27,9.39,4.48,6.48,0.42,1.58,0.64,0.70,0.61,0.42,0.43,0.37 Russian_Tver,24.02,49.02,9.38,6.67,2.18,1.22,1.42,0.17,3.91,1.26,0.14,0.52,0.10 Russian_Yaroslavl,26.39,50.24,9.22,5.00,0.55,0.74,0.73,0.00,3.71,1.65,0.71,0.84,0.24 #K15 Bashkir_Central,13.48,7.20,13.69,22.01,1.08,9.26,1.59,0.51,3.42,5.35,19.73,1.96,0.29,0.15,0.31 Bashkir_North,13.09,8.94,16.00,23.59,1.11,7.65,0.71,0.36,3.72,4.30,17.90,1.67,0.44,0.24,0.30 Bashkir_South,10.88,4.87,9.56,19.30,0.29,10.21,0.33,0.13,4.28,9.49,27.27,2.83,0.27,0.10,0.20 Russian_Arkhangelsk_Krasnoborsky,21.90,15.15,26.36,23.16,1.27,1.34,0.55,0.26,1.71,0.70,6.31,0.75,0.35,0.18,0.00 Russian_Arkhangelsk_Leshukonsky,21.32,10.90,23.55,27.22,0.51,0.82,0.11,0.18,1.13,0.12,11.21,1.64,0.63,0.27,0.38 Russian_Arkhangelsk_Pinezhsky,21.03,12.63,24.46,28.27,1.07,0.66,0.00,0.00,1.49,0.27,7.52,1.73,0.41,0.38,0.07 Russian_Belgorod,18.05,14.70,30.80,20.34,6.34,4.38,2.16,1.01,0.24,0.41,0.57,0.36,0.28,0.37,0.00 Russian_Kaluga,20.85,15.76,31.01,20.91,2.68,3.30,1.32,1.39,0.86,0.00,0.68,0.92,0.13,0.00,0.20 Russian_Kursk,20.98,13.50,29.62,22.27,3.50,2.94,3.90,0.06,0.74,0.51,0.79,0.56,0.28,0.12,0.26 Russian_Orel,18.25,17.28,28.83,19.49,3.93,5.58,1.85,0.77,0.92,0.29,1.46,0.64,0.15,0.22,0.35 Russian_Pskov,19.25,14.70,33.04,23.84,2.99,2.82,0.16,0.86,0.08,0.00,0.77,0.49,0.31,0.24,0.45 Russian_Ryazan,19.16,13.56,29.21,21.64,4.57,5.49,1.62,0.28,1.13,0.27,1.56,0.71,0.22,0.35,0.23 Russian_Smolensk,17.63,16.15,31.95,20.98,4.92,3.31,2.29,0.28,1.05,0.20,0.12,0.24,0.25,0.31,0.31 Russian_Tver,17.58,14.28,30.37,22.66,4.68,3.68,1.18,0.41,0.93,0.04,2.64,0.97,0.03,0.42,0.15 Russian_Yaroslavl,20.70,12.91,30.86,23.63,5.04,1.70,0.00,0.00,0.27,0.00,2.19,1.36,0.50,0.65,0.18 #K12b Bashkir_Central,8.96,18.31,0.37,0.95,11.03,38.13,1.49,0.10,1.45,9.59,9.47,0.14 Bashkir_North,8.38,17.54,0.22,0.68,11.69,41.59,1.94,0.03,0.52,7.50,9.66,0.25 Bashkir_South,11.08,24.17,0.35,1.20,7.48,29.52,1.83,0.12,0.47,15.73,7.89,0.15 Russian_Arkhangelsk_Krasnoborsky,4.77,7.42,0.26,0.28,18.80,59.08,0.69,0.00,0.54,1.60,6.55,0.00 Russian_Arkhangelsk_Leshukonsky,5.07,12.41,0.28,0.80,12.12,59.86,0.99,0.39,1.24,1.40,5.40,0.03 Russian_Arkhangelsk_Pinezhsky,4.01,9.51,0.44,0.72,15.46,62.88,1.26,0.28,0.33,0.58,4.31,0.23 Russian_Belgorod,2.61,1.79,0.14,0.19,20.74,58.38,0.83,0.00,1.95,0.45,12.86,0.05 Russian_Kaluga,1.85,2.11,0.18,0.50,19.00,60.34,0.62,0.00,2.33,0.06,12.99,0.00 Russian_Kursk,3.31,1.57,0.00,0.28,19.46,58.41,1.25,0.08,1.93,0.42,13.15,0.15 Russian_Orel,3.64,2.13,0.46,0.22,19.38,56.10,1.51,0.39,1.10,0.63,14.32,0.12 Russian_Pskov,2.68,1.95,0.04,0.42,20.60,62.03,0.89,0.05,1.61,0.01,9.38,0.34 Russian_Ryazan,4.58,3.36,0.35,0.09,20.50,56.92,0.96,0.14,0.64,0.33,12.04,0.08 Russian_Smolensk,4.46,1.34,0.25,0.62,21.99,57.22,0.74,0.13,1.50,0.00,11.63,0.12 Russian_Tver,3.95,3.76,1.19,0.37,19.36,57.28,0.40,0.00,1.71,0.47,11.17,0.35 Russian_Vologda,3.05,7.38,0.20,0.41,14.05,63.22,0.95,0.04,1.41,0.77,8.53,0.01 Russian_Yaroslavl,3.36,4.03,0.89,0.00,20.00,60.00,0.71,0.16,0.63,0.66,9.56,0.00

Individual samples:

Code:

#K13 Bashkir_Central:BAS-091,12.07,30.11,0.00,13.69,3.00,0.03,4.74,8.18,23.64,3.86,0.00,0.00,0.67 Bashkir_Central:BAS-094,18.00,33.01,4.80,10.28,3.13,1.43,1.37,5.06,19.83,1.88,0.34,0.31,0.55 Bashkir_Central:BAS-096,12.50,30.86,1.74,15.24,0.96,0.00,3.46,6.82,24.75,1.29,1.10,0.02,1.26 Bashkir_Central:BAS-105,18.83,37.35,5.80,6.04,8.05,1.40,0.56,2.93,14.63,1.33,0.80,2.14,0.14 Bashkir_Central:BAS-111,16.80,30.58,5.63,14.17,3.27,0.38,2.51,4.48,18.30,2.49,0.55,0.00,0.84 Bashkir_Central:BAS-120,12.94,24.40,2.67,17.26,1.70,0.00,5.65,7.45,24.34,2.53,0.00,0.35,0.71 Bashkir_Central:BAS-121,14.06,30.34,5.10,12.53,4.79,0.22,2.82,5.79,18.20,2.95,1.53,0.75,0.92 Bashkir_Central:BAS-125,14.43,34.03,4.64,11.36,2.81,0.49,4.41,4.82,20.97,1.88,0.00,0.16,0.00 Bashkir_Central:BAS-135,16.22,27.20,6.44,10.29,0.12,0.02,3.88,7.60,24.40,3.29,0.54,0.00,0.00 Bashkir_Central:BAS-600,12.73,30.50,1.51,10.88,2.17,0.00,4.55,9.46,25.47,2.34,0.00,0.00,0.39 Bashkir_Central:BAS-622,12.71,27.59,2.74,12.10,5.10,3.38,2.40,7.90,24.65,1.32,0.09,0.00,0.02 Bashkir_Central:BAS-655,15.37,32.37,1.62,10.10,3.92,0.00,4.31,4.93,23.73,3.46,0.00,0.00,0.18 Bashkir_Central:BAS-661,17.28,30.80,2.33,14.96,0.00,0.00,2.85,4.51,25.12,1.50,0.04,0.62,0.00 Bashkir_Central:BAS-663,12.63,33.53,1.13,15.89,0.00,0.11,4.73,6.18,22.83,2.00,0.00,0.13,0.86 Bashkir_Central:BAS-669,16.88,35.15,0.00,15.09,0.68,1.61,2.76,2.92,19.92,3.50,1.50,0.00,0.00 Bashkir_Central:BAS-672,20.32,30.21,2.75,9.22,3.33,0.84,2.66,8.26,19.84,2.28,0.00,0.30,0.00 Bashkir_Central:BAS-1392,20.31,34.89,0.46,10.37,8.09,0.00,2.53,5.81,14.64,2.19,0.43,0.00,0.27 Bashkir_Central:BAS-1393,17.49,30.85,5.37,13.90,1.35,0.20,5.81,3.90,20.41,0.30,0.00,0.00,0.42 Bashkir_Central:BAS-1394,13.07,33.64,4.93,10.38,4.36,2.36,5.96,4.59,18.84,1.46,0.37,0.01,0.03 Bashkir_Central:BAS-1396,17.11,31.72,1.77,12.11,6.24,1.45,6.10,2.95,17.16,2.80,0.58,0.00,0.00 Bashkir_Central:BAS-1398,18.18,37.79,2.84,11.63,3.78,0.24,1.20,2.90,19.98,0.81,0.21,0.44,0.00 Bashkir_Central:BAS-1400,13.72,33.93,5.61,12.58,0.00,2.15,2.94,1.03,23.76,3.53,0.00,0.00,0.74 Bashkir_North:BAS-652,17.84,34.24,3.50,6.88,3.06,0.00,5.24,4.49,22.19,1.13,0.53,0.90,0.00 Bashkir_North:BAS-670,18.20,34.23,4.84,7.13,1.91,0.00,3.48,4.78,20.93,3.31,0.00,1.19,0.00 Bashkir_North:BAS-671,16.03,35.16,1.36,13.35,0.00,0.00,3.60,4.63,21.58,2.68,1.20,0.00,0.42 Bashkir_North:BAS-683,11.75,35.91,3.35,11.59,5.38,0.02,1.61,7.70,19.90,2.14,0.19,0.00,0.46 Bashkir_North:BAS-811,18.10,34.83,3.60,14.37,2.20,0.00,2.61,2.14,18.41,1.37,1.05,0.00,1.31 Bashkir_North:BAS-813,18.99,36.93,1.56,9.48,3.29,2.38,3.20,3.52,17.42,1.81,0.68,0.00,0.72 Bashkir_North:BAS-822,16.70,33.24,5.39,13.12,0.00,0.26,4.09,4.14,19.17,1.80,1.52,0.57,0.00 Bashkir_North:BAS-825,13.83,35.88,1.75,11.25,4.25,1.60,5.95,3.30,19.37,2.27,0.56,0.00,0.00 Bashkir_North:BAS-831,20.28,37.05,1.74,9.60,4.62,0.25,3.21,5.36,16.14,1.06,0.00,0.00,0.69 Bashkir_North:BAS-833,15.40,35.79,6.10,11.93,0.54,0.00,4.09,4.86,18.54,2.26,0.49,0.00,0.00 Bashkir_North:BAS-834,18.23,32.77,4.52,11.10,2.39,1.16,5.04,3.64,18.87,2.17,0.00,0.11,0.00 Bashkir_North:BAS-849,18.88,32.51,6.99,8.88,0.00,1.53,3.95,4.42,20.76,0.37,0.87,0.00,0.84 Bashkir_South:BAS-005,12.69,26.52,0.00,12.28,0.00,0.00,6.69,9.23,29.43,3.17,0.00,0.00,0.00 Bashkir_South:BAS-006,14.84,20.58,0.00,16.88,0.00,1.74,4.48,8.82,29.45,2.31,0.68,0.22,0.00 Bashkir_South:BAS-008,16.05,21.18,0.00,13.24,0.00,0.00,4.10,10.86,29.06,4.90,0.48,0.00,0.13 Bashkir_South:BAS-014,17.57,24.22,0.71,8.31,2.87,0.14,3.89,7.11,30.53,3.73,0.92,0.00,0.00 Bashkir_South:BAS-017,14.79,20.71,0.82,15.31,0.00,0.12,6.15,10.44,30.01,0.70,0.00,0.00,0.95 Bashkir_South:BAS-021,11.17,24.69,2.69,13.21,0.17,0.64,4.70,9.16,29.34,2.91,0.65,0.50,0.17 Bashkir_South:BAS-029,13.31,27.13,0.00,12.31,0.74,0.32,6.54,8.36,27.08,4.20,0.00,0.00,0.00 Bashkir_South:BAS-031,11.39,22.63,0.00,14.77,0.22,0.29,5.28,12.46,29.84,2.69,0.00,0.00,0.42 Bashkir_South:BAS-033,13.21,19.98,2.15,16.88,0.00,0.00,4.47,8.49,29.69,4.39,0.75,0.00,0.00 Bashkir_South:BAS-034,11.97,24.96,0.72,11.56,2.94,0.00,4.68,11.96,27.96,1.52,0.92,0.43,0.38 Bashkir_South:BAS-042,12.44,26.33,2.83,12.11,0.00,0.00,2.59,8.73,30.37,3.14,0.00,1.21,0.24 Bashkir_South:BAS-045,12.46,21.30,2.78,14.29,3.02,0.00,2.86,11.22,27.77,3.42,0.48,0.40,0.00 Bashkir_South:BAS-046,13.50,25.78,0.00,12.67,3.57,0.00,5.08,8.07,28.43,2.76,0.00,0.08,0.06 Bashkir_South:BAS-060,10.02,27.77,0.28,13.08,1.81,0.00,4.24,9.53,30.37,2.86,0.00,0.06,0.00 Bashkir_South:BAS-062,10.08,25.57,2.26,13.56,2.13,0.00,3.75,8.48,30.29,3.89,0.00,0.00,0.00 Bashkir_South:BAS-150,7.73,25.53,4.63,16.83,2.12,0.70,0.14,11.64,26.89,2.88,0.91,0.00,0.00 Bashkir_South:BAS-153,13.81,25.70,2.54,14.65,0.18,1.24,4.71,7.81,24.55,3.47,0.21,0.00,1.12 Bashkir_South:BAS-156,11.64,30.60,0.00,12.32,0.56,0.57,3.72,9.17,28.16,2.50,0.00,0.20,0.55 Bashkir_South:BAS-164,13.43,31.07,1.24,11.71,1.86,0.00,1.51,11.34,25.69,1.22,0.48,0.00,0.45 Russian_Arkhangelsk_Krasnoborsky:Rakr-203,27.86,48.62,4.44,4.94,0.14,0.26,1.28,2.37,7.81,1.35,0.94,0.00,0.00 Russian_Arkhangelsk_Krasnoborsky:Rakr-205,27.36,46.43,4.44,4.03,5.04,1.37,2.70,1.10,5.70,0.03,1.20,0.60,0.00 Russian_Arkhangelsk_Krasnoborsky:Rakr-237,27.74,45.53,7.26,3.67,2.68,1.78,0.40,1.41,7.63,1.91,0.00,0.00,0.00 Russian_Arkhangelsk_Krasnoborsky:Rakr-248,25.48,50.30,5.62,4.11,1.96,0.03,4.31,0.00,7.61,0.00,0.00,0.57,0.00 Russian_Arkhangelsk_Krasnoborsky:Rakr-341,30.12,48.54,3.58,3.10,0.00,0.00,2.60,0.00,10.34,1.04,0.28,0.36,0.04 Russian_Arkhangelsk_Krasnoborsky:Rakr-345,30.47,46.46,4.75,5.46,1.77,0.00,2.21,0.25,7.03,1.27,0.34,0.00,0.00 Russian_Arkhangelsk_Leshukonsky:Rakrlsh-002,25.95,49.80,0.00,5.87,0.00,0.00,1.33,1.03,13.19,1.02,0.91,0.91,0.00 Russian_Arkhangelsk_Leshukonsky:Rakrlsh-140,26.25,45.81,6.11,3.43,0.00,0.00,0.80,0.19,15.09,1.03,0.00,0.00,1.29 Russian_Arkhangelsk_Leshukonsky:Rakrlsh-143,24.93,45.99,0.71,6.81,2.51,0.00,2.92,0.00,12.79,2.03,0.49,0.00,0.81 Russian_Arkhangelsk_Leshukonsky:Rakrlsh-144,25.19,53.19,0.00,3.18,0.00,0.00,0.15,0.23,13.23,2.65,0.98,0.62,0.58 Russian_Arkhangelsk_Leshukonsky:Rakrlsh-149,23.17,50.13,3.24,2.38,2.27,1.97,2.01,0.13,9.79,2.41,1.38,1.11,0.01 Russian_Arkhangelsk_Pinezhsky:RPin-114,25.09,49.29,8.92,1.88,0.73,0.00,0.58,0.00,8.36,3.42,1.40,0.26,0.08 Russian_Arkhangelsk_Pinezhsky:RPin-123,28.68,51.10,1.58,3.28,0.00,0.00,2.40,0.00,11.42,0.00,0.91,0.65,0.00 Russian_Arkhangelsk_Pinezhsky:RPin-143,26.38,49.77,2.57,5.21,1.95,0.41,2.84,1.49,8.59,0.79,0.00,0.00,0.00 Russian_Arkhangelsk_Pinezhsky:RPin-145,23.21,50.93,3.49,3.56,2.07,0.44,2.19,0.02,9.24,2.53,0.45,1.88,0.00 Russian_Arkhangelsk_Pinezhsky:RPin-151,28.20,54.80,0.91,0.00,0.28,0.00,3.38,0.07,8.94,2.48,0.02,0.00,1.00 Russian_Belgorod:Rbgp-200,24.44,48.86,12.68,4.27,4.37,1.23,0.16,0.48,2.15,1.36,0.00,0.00,0.00 Russian_Belgorod:Rbgp-201,22.21,49.61,9.69,3.92,7.63,1.15,1.35,0.00,1.91,0.75,0.42,1.38,0.00 Russian_Belgorod:Rbgp-203,23.58,42.33,13.17,8.98,7.90,0.79,0.00,1.50,1.10,0.00,0.64,0.00,0.00 Russian_Belgorod:Rbgp-205,24.50,50.32,9.46,5.86,3.49,2.83,1.74,0.75,0.13,0.61,0.06,0.00,0.26 Russian_Kaluga:Rkbo-12,28.25,48.57,6.63,1.90,7.63,2.02,2.19,0.00,1.35,1.09,0.00,0.00,0.38 Russian_Kaluga:Rkbo-16,29.49,46.09,6.82,5.18,3.15,3.24,0.15,0.00,3.29,1.90,0.69,0.00,0.00 Russian_Kaluga:Rkbo-44,28.41,46.71,7.03,2.17,9.29,0.00,2.04,0.00,1.96,1.62,0.27,0.00,0.51 Russian_Kaluga:Rkbo-58,27.44,52.44,6.57,6.81,3.04,1.61,0.00,0.00,1.63,0.00,0.00,0.00,0.47 Russian_Kursk:Rkuch-03,25.38,49.87,5.91,3.38,10.21,0.45,0.16,0.00,3.65,0.21,0.00,0.52,0.26 Russian_Kursk:Rkuch-05,31.46,47.12,6.94,4.86,5.74,0.00,0.00,0.42,2.31,0.58,0.38,0.19,0.00 Russian_Kursk:Rkuch-53,22.63,46.39,6.32,6.46,13.49,0.00,0.05,2.60,1.14,0.92,0.00,0.00,0.00 Russian_Kursk:Rkuch-58,27.01,47.77,11.24,4.59,0.00,0.98,3.52,0.00,0.53,1.88,1.09,0.93,0.46 Russian_Orel:Rorl-102,27.59,45.03,7.95,5.64,3.03,0.00,2.94,0.97,5.18,0.00,0.39,0.00,1.28 Russian_Orel:Rorl-110,23.30,48.26,8.83,10.25,4.33,1.36,0.18,1.90,0.00,0.18,0.01,1.34,0.04 Russian_Orel:Rorl-114,29.35,41.92,7.12,5.10,10.16,2.22,0.82,0.00,1.84,1.47,0.00,0.00,0.00 Russian_Orel:Rorl-155,29.83,44.61,8.23,3.71,7.59,0.75,1.01,0.00,2.24,1.76,0.25,0.03,0.00 Russian_Pskov:Rps-004,25.17,58.94,6.28,0.97,0.00,5.23,1.71,0.00,0.00,0.00,1.18,0.53,0.00 Russian_Pskov:Rps-006,29.40,54.88,7.35,3.40,0.00,0.76,1.40,0.00,0.69,1.15,0.13,0.00,0.83 Russian_Pskov:Rps-012,29.21,52.56,8.13,3.06,2.57,0.00,0.07,0.20,1.98,1.06,0.15,1.00,0.00 Russian_Pskov:Rps-090,30.28,52.01,5.70,6.36,0.00,0.09,0.00,0.00,2.73,0.00,1.73,0.32,0.78 Russian_Pskov:Rps-091,23.93,49.74,11.25,5.86,1.15,3.40,0.08,0.00,2.29,0.79,0.00,0.09,1.41 Russian_Pskov:Rps-098,24.02,50.27,7.95,7.36,3.77,0.65,0.00,0.00,3.54,1.36,0.29,0.78,0.00 Russian_Ryazan:Rrzm-08,28.45,43.70,9.59,9.22,4.03,0.32,0.21,0.00,1.58,1.24,0.65,1.03,0.00 Russian_Ryazan:Rrzm-10,21.97,49.95,7.68,5.10,9.24,0.39,0.47,1.35,1.02,1.44,0.48,0.56,0.35 Russian_Ryazan:Rrzm-13,21.35,48.63,9.32,8.96,0.31,1.26,2.26,0.00,4.93,1.40,0.57,1.01,0.00 Russian_Ryazan:Rrzm-16,23.95,47.11,9.08,4.31,7.46,0.23,4.38,1.84,0.00,0.66,0.29,0.00,0.68 Russian_Ryazan:Rrzs-3,22.11,51.89,8.54,2.05,9.53,0.02,1.00,0.00,3.05,1.48,0.00,0.00,0.32 Russian_Ryazan:Rrzs-7,23.21,48.56,7.94,9.03,2.88,0.26,1.23,1.09,3.64,1.59,0.02,0.00,0.56 Russian_Ryazan:Rrzs-11,24.62,45.49,12.24,9.53,0.22,0.00,2.65,0.13,3.59,1.52,0.00,0.00,0.00 Russian_Ryazan:Rrzs-32,27.45,48.79,7.74,5.54,2.36,1.82,1.04,0.00,3.69,0.69,0.00,0.85,0.02 Russian_Ryazan:Rrzs-58,23.59,47.94,8.09,6.28,7.88,0.00,2.44,0.00,3.06,0.32,0.18,0.00,0.23 Russian_Ryazan:Rrzs-66,28.09,43.46,8.76,10.52,0.00,1.29,1.92,0.00,4.47,0.00,0.31,0.85,0.33 Russian_Ryazan:Rrzs-88,29.02,43.09,6.97,7.55,5.37,2.03,0.74,0.03,3.63,0.52,1.06,0.00,0.00 Russian_Smolensk:Rsm-103,26.39,47.31,10.49,2.31,6.37,1.35,3.91,0.00,1.40,0.47,0.00,0.00,0.00 Russian_Smolensk:Rsm-109,27.27,48.64,10.87,5.02,4.77,0.00,0.10,0.82,1.68,0.00,0.36,0.46,0.00 Russian_Smolensk:Rsm-166,27.75,46.89,7.81,7.85,6.15,0.00,1.80,0.00,0.23,0.79,0.32,0.40,0.00 Russian_Smolensk:Rsm-171,27.98,48.38,10.25,1.21,5.92,0.65,1.80,1.20,0.59,0.42,0.79,0.81,0.00 Russian_Smolensk:Rsm-176,21.92,49.99,8.16,5.32,9.02,0.04,2.51,0.58,0.00,1.13,0.00,1.33,0.00 Russian_Smolensk:Rsm-179,27.80,46.84,7.49,6.63,6.05,0.89,0.92,0.83,0.99,0.15,0.57,0.00,0.83 Russian_Smolensk:Rsm-181,24.44,49.82,10.65,3.01,7.08,0.00,0.00,1.02,0.00,1.33,0.88,0.00,1.76 Russian_Tver:Rksh-402,28.04,47.39,8.29,6.89,0.00,0.32,2.18,0.00,4.68,1.57,0.58,0.00,0.06 Russian_Tver:Rksh-405,20.95,47.97,10.90,8.86,3.17,3.02,0.00,0.67,2.40,2.07,0.00,0.00,0.00 Russian_Tver:Rksh-407,25.32,48.23,8.72,6.55,0.00,0.90,1.43,0.00,5.86,0.89,0.00,2.09,0.00 Russian_Tver:Rksh-412,21.76,52.48,9.59,4.38,5.53,0.66,2.06,0.00,2.70,0.49,0.00,0.00,0.35 Russian_Yaroslavl:RYAR-173,26.83,51.70,8.58,3.83,1.65,0.00,0.00,0.00,3.95,1.49,0.67,0.59,0.73 Russian_Yaroslavl:RYAR-223,24.63,51.44,10.42,2.94,0.00,1.02,0.70,0.00,4.88,1.90,0.14,1.93,0.00 Russian_Yaroslavl:RYAR-232,27.72,47.58,8.66,8.22,0.00,1.19,1.49,0.00,2.29,1.55,1.31,0.00,0.00 #K15 Bashkir_Central:BAS-091,15.36,0.49,12.95,19.23,0.00,12.21,0.00,0.00,5.17,7.89,22.39,3.83,0.00,0.00,0.48 Bashkir_Central:BAS-094,17.68,5.07,14.48,22.25,2.83,6.39,3.43,0.67,0.90,5.64,18.25,1.79,0.09,0.09,0.45 Bashkir_Central:BAS-096,11.85,5.04,11.80,24.49,0.00,9.79,0.36,0.00,3.67,6.70,23.11,1.10,1.02,0.00,1.07 Bashkir_Central:BAS-105,11.60,12.41,19.05,23.16,2.27,4.31,6.30,0.85,0.08,2.98,13.15,1.05,0.74,1.52,0.53 Bashkir_Central:BAS-111,16.81,5.31,13.84,19.99,3.25,10.25,3.08,0.00,2.46,4.25,16.98,2.31,0.61,0.00,0.84 Bashkir_Central:BAS-120,7.34,8.84,10.43,19.44,0.00,12.73,1.88,0.00,5.73,7.43,22.75,2.47,0.00,0.43,0.54 Bashkir_Central:BAS-121,16.23,4.39,11.41,21.31,1.73,10.76,3.62,0.00,2.40,5.93,16.75,2.77,1.38,0.40,0.93 Bashkir_Central:BAS-125,11.10,8.93,13.61,25.65,1.30,6.87,2.65,0.08,3.96,4.79,19.64,1.42,0.00,0.00,0.00 Bashkir_Central:BAS-135,10.71,10.83,9.60,20.13,2.97,8.27,0.00,0.00,3.69,7.49,23.05,2.94,0.33,0.00,0.00 Bashkir_Central:BAS-600,10.52,5.45,13.74,21.45,0.00,8.84,0.00,0.00,4.12,9.37,24.03,2.08,0.00,0.00,0.39 Bashkir_Central:BAS-622,10.78,5.95,11.77,20.11,1.40,10.19,1.89,3.33,2.28,8.15,22.97,1.17,0.00,0.00,0.01 Bashkir_Central:BAS-655,15.23,6.66,12.86,21.81,0.00,7.54,1.28,0.00,4.52,4.98,22.04,2.97,0.00,0.00,0.13 Bashkir_Central:BAS-661,15.63,8.32,12.16,21.42,0.00,10.09,0.00,0.00,2.75,4.49,23.80,1.20,0.00,0.15,0.00 Bashkir_Central:BAS-663,16.51,0.76,11.88,26.24,0.00,10.30,0.00,0.00,4.66,6.03,21.37,1.56,0.00,0.16,0.54 Bashkir_Central:BAS-669,11.79,8.70,13.49,26.10,0.00,11.48,0.00,0.08,2.81,2.67,18.30,3.33,1.26,0.00,0.00 Bashkir_Central:BAS-672,17.08,9.01,14.35,19.20,0.87,5.71,1.09,0.78,2.97,8.17,18.64,2.02,0.00,0.10,0.00 Bashkir_Central:BAS-1392,15.79,9.74,14.54,22.96,0.00,10.88,2.58,0.00,2.08,5.87,13.31,1.70,0.49,0.00,0.07 Bashkir_Central:BAS-1393,11.09,11.64,12.45,22.72,2.19,11.39,0.00,0.00,5.53,3.76,18.96,0.03,0.00,0.00,0.24 Bashkir_Central:BAS-1394,11.42,7.04,18.38,18.78,1.38,9.30,1.86,2.57,5.64,4.48,17.72,1.31,0.12,0.00,0.00 Bashkir_Central:BAS-1396,11.70,10.04,14.57,21.65,0.00,9.58,3.39,1.30,6.02,2.99,15.73,2.58,0.44,0.00,0.00 Bashkir_Central:BAS-1398,15.86,7.64,17.27,26.21,0.62,7.95,1.56,0.06,0.94,2.67,18.55,0.28,0.00,0.38,0.00 Bashkir_Central:BAS-1400,14.52,6.05,16.51,19.83,2.86,8.89,0.00,1.41,2.82,0.88,22.48,3.24,0.00,0.00,0.52 Bashkir_North:BAS-652,13.48,11.76,14.60,22.75,0.43,3.57,1.09,0.00,4.93,4.13,20.73,1.07,0.46,1.00,0.00 Bashkir_North:BAS-670,11.29,13.77,16.05,21.82,1.06,4.38,0.00,0.00,3.01,4.78,19.33,3.17,0.00,1.24,0.11 Bashkir_North:BAS-671,11.53,8.38,14.67,25.75,0.00,7.66,0.00,0.00,3.67,4.30,20.16,2.55,0.97,0.00,0.37 Bashkir_North:BAS-683,14.47,1.02,11.58,30.65,2.09,7.89,2.98,0.25,1.61,7.69,17.40,1.95,0.13,0.09,0.19 Bashkir_North:BAS-811,12.13,10.24,18.00,22.49,0.45,11.91,0.00,0.00,2.84,1.92,16.99,1.34,0.65,0.00,1.03 Bashkir_North:BAS-813,16.78,6.67,18.40,23.35,0.00,7.50,0.33,1.99,3.08,3.40,15.83,1.58,0.44,0.00,0.65 Bashkir_North:BAS-822,14.77,7.35,15.73,21.83,2.05,8.75,0.00,0.00,4.52,3.98,17.98,1.60,1.28,0.16,0.00 Bashkir_North:BAS-825,13.49,5.77,14.80,24.83,0.00,7.88,2.54,1.53,5.84,3.15,17.82,1.94,0.41,0.00,0.00 Bashkir_North:BAS-831,15.49,8.91,19.99,22.38,0.00,7.38,1.42,0.00,3.30,5.16,14.78,0.68,0.00,0.00,0.51 Bashkir_North:BAS-833,11.59,8.74,17.60,22.74,1.53,10.11,0.00,0.00,3.34,4.87,17.19,1.97,0.35,0.00,0.00 Bashkir_North:BAS-834,12.21,12.18,15.40,20.52,1.94,9.24,0.00,0.18,5.04,3.76,17.47,1.93,0.00,0.12,0.00 Bashkir_North:BAS-849,9.82,12.51,15.14,23.99,3.77,5.48,0.21,0.31,3.44,4.40,19.16,0.21,0.65,0.21,0.69 Bashkir_South:BAS-005,11.46,2.47,11.22,20.79,0.00,7.09,0.00,0.00,6.87,9.16,27.87,3.08,0.00,0.00,0.00 Bashkir_South:BAS-006,14.74,4.47,6.81,15.63,0.00,13.09,0.00,0.87,4.80,8.58,28.29,2.09,0.51,0.13,0.00 Bashkir_South:BAS-008,10.31,7.21,8.88,15.58,0.00,10.14,0.00,0.00,4.19,10.34,28.25,4.73,0.37,0.00,0.00 Bashkir_South:BAS-014,9.89,11.52,11.52,15.78,0.00,6.52,0.00,0.19,4.19,6.83,29.30,3.45,0.80,0.00,0.00 Bashkir_South:BAS-017,11.83,4.98,9.07,14.82,0.00,12.56,0.00,0.00,6.16,10.36,29.09,0.49,0.00,0.00,0.64 Bashkir_South:BAS-021,6.42,6.10,10.00,21.86,0.00,10.51,0.00,0.00,4.64,9.24,27.26,2.78,0.59,0.59,0.00 Bashkir_South:BAS-029,11.01,4.69,8.04,24.33,0.00,7.58,0.00,0.00,6.68,8.53,25.16,3.98,0.00,0.00,0.00 Bashkir_South:BAS-031,4.28,8.31,11.12,15.25,0.00,11.91,0.00,0.00,5.34,12.23,28.74,2.66,0.00,0.00,0.16 Bashkir_South:BAS-033,8.03,6.99,8.41,16.41,0.50,13.05,0.00,0.00,4.75,8.23,28.28,4.52,0.85,0.00,0.00 Bashkir_South:BAS-034,11.29,3.06,9.52,20.57,0.00,7.53,1.97,0.00,4.64,12.16,26.47,1.43,0.71,0.32,0.32 Bashkir_South:BAS-042,14.24,2.08,9.74,19.78,1.16,8.78,0.00,0.00,2.60,8.16,28.93,3.20,0.00,0.83,0.49 Bashkir_South:BAS-045,13.16,5.59,6.98,15.61,0.39,12.16,1.37,0.00,2.80,11.38,26.65,3.27,0.40,0.00,0.25 Bashkir_South:BAS-046,14.66,2.74,9.51,18.00,0.00,10.84,1.29,0.00,5.32,7.80,27.08,2.62,0.00,0.00,0.13 Bashkir_South:BAS-060,12.58,0.28,7.51,23.95,0.03,10.48,0.08,0.00,4.39,9.37,28.56,2.75,0.00,0.00,0.00 Bashkir_South:BAS-062,6.16,5.58,9.63,22.62,0.63,9.55,1.32,0.00,4.08,7.98,29.00,3.47,0.00,0.00,0.00 Bashkir_South:BAS-150,9.45,1.19,11.41,19.87,2.78,14.35,0.07,0.61,0.01,11.77,25.42,2.43,0.63,0.00,0.00 Bashkir_South:BAS-153,9.44,9.05,11.52,18.55,0.00,10.82,0.00,0.71,4.75,7.71,23.38,3.14,0.03,0.00,0.90 Bashkir_South:BAS-156,15.15,0.00,9.77,24.23,0.00,8.87,0.00,0.00,3.35,9.20,26.38,2.53,0.00,0.00,0.53 Bashkir_South:BAS-164,12.63,6.22,10.90,23.15,0.00,8.24,0.21,0.00,1.73,11.20,24.10,1.13,0.16,0.00,0.33 Russian_Arkhangelsk_Krasnoborsky:Rakr-203,24.58,12.45,29.34,21.12,0.00,1.07,0.00,0.00,0.78,2.05,6.83,1.04,0.74,0.00,0.00 Russian_Arkhangelsk_Krasnoborsky:Rakr-205,19.27,16.15,25.55,24.86,0.75,0.63,3.28,0.52,2.48,0.80,4.09,0.00,1.05,0.57,0.00 Russian_Arkhangelsk_Krasnoborsky:Rakr-237,19.77,17.62,24.33,22.78,3.44,2.09,0.00,1.05,0.00,0.97,6.39,1.56,0.00,0.00,0.00 Russian_Arkhangelsk_Krasnoborsky:Rakr-248,20.50,11.12,29.73,23.95,2.93,1.90,0.00,0.00,3.45,0.00,5.95,0.00,0.00,0.47,0.00 Russian_Arkhangelsk_Krasnoborsky:Rakr-341,24.83,13.92,26.84,22.34,0.00,0.00,0.00,0.00,1.95,0.00,9.19,0.74,0.12,0.07,0.00 Russian_Arkhangelsk_Krasnoborsky:Rakr-345,22.48,19.66,22.40,23.88,0.50,2.32,0.00,0.00,1.60,0.41,5.41,1.15,0.19,0.00,0.00 Russian_Arkhangelsk_Leshukonsky:Rakrlsh-002,21.50,10.01,24.69,27.23,0.00,1.06,0.00,0.00,1.48,0.38,11.59,0.90,0.74,0.42,0.00 Russian_Arkhangelsk_Leshukonsky:Rakrlsh-140,25.82,9.87,23.01,22.90,2.54,0.00,0.00,0.00,0.16,0.24,13.68,0.84,0.00,0.00,0.93 Russian_Arkhangelsk_Leshukonsky:Rakrlsh-143,18.50,13.93,22.96,24.91,0.00,2.92,0.00,0.00,2.60,0.00,11.43,1.92,0.43,0.00,0.41 Russian_Arkhangelsk_Leshukonsky:Rakrlsh-144,22.47,7.26,22.22,33.23,0.00,0.00,0.00,0.00,0.00,0.00,11.04,2.43,0.81,0.00,0.54 Russian_Arkhangelsk_Leshukonsky:Rakrlsh-149,18.32,13.42,24.89,27.83,0.00,0.10,0.56,0.92,1.43,0.00,8.33,2.09,1.17,0.95,0.00 Russian_Arkhangelsk_Pinezhsky:RPin-114,19.00,15.35,24.22,24.81,5.34,0.00,0.00,0.00,0.00,0.00,6.88,3.26,1.16,0.00,0.00 Russian_Arkhangelsk_Pinezhsky:RPin-123,16.36,18.32,20.36,33.35,0.00,0.00,0.00,0.00,1.55,0.00,9.32,0.00,0.64,0.09,0.00 Russian_Arkhangelsk_Pinezhsky:RPin-143,25.21,10.39,23.03,28.15,0.00,2.19,0.00,0.00,2.21,1.37,6.83,0.62,0.00,0.00,0.00 Russian_Arkhangelsk_Pinezhsky:RPin-145,19.91,11.77,24.41,29.16,0.00,1.12,0.00,0.00,1.86,0.00,7.29,2.43,0.26,1.80,0.00 Russian_Arkhangelsk_Pinezhsky:RPin-151,24.67,7.33,30.28,25.90,0.00,0.00,0.00,0.00,1.81,0.00,7.30,2.33,0.00,0.00,0.36 Russian_Belgorod:Rbgp-200,20.09,12.96,29.46,23.65,8.35,1.24,1.40,1.09,0.00,0.08,0.67,1.01,0.00,0.00,0.00 Russian_Belgorod:Rbgp-201,17.80,12.97,31.00,22.21,5.43,3.39,2.90,0.80,0.94,0.00,0.38,0.41,0.30,1.48,0.00 Russian_Belgorod:Rbgp-203,21.53,14.18,29.46,13.11,6.97,8.16,3.93,0.65,0.00,1.56,0.03,0.00,0.43,0.00,0.00 Russian_Belgorod:Rbgp-205,12.77,18.67,33.30,22.39,4.63,4.74,0.43,1.49,0.00,0.00,1.20,0.00,0.39,0.00,0.00 Russian_Kaluga:Rkbo-12,21.90,13.37,32.36,20.08,3.25,1.95,2.18,1.97,1.73,0.00,0.27,0.69,0.00,0.00,0.27 Russian_Kaluga:Rkbo-16,20.98,15.62,28.99,20.94,2.50,4.60,0.00,2.54,0.00,0.00,1.83,1.63,0.37,0.00,0.00 Russian_Kaluga:Rkbo-44,20.52,15.99,28.74,21.25,3.94,2.40,3.10,0.00,1.69,0.00,0.55,1.37,0.16,0.00,0.29 Russian_Kaluga:Rkbo-58,20.00,18.07,33.94,21.36,1.05,4.25,0.00,1.04,0.00,0.00,0.06,0.00,0.00,0.00,0.23 Russian_Kursk:Rkuch-03,25.90,8.72,27.38,26.16,2.52,0.95,5.67,0.24,0.00,0.00,1.86,0.00,0.00,0.23,0.38 Russian_Kursk:Rkuch-05,22.63,18.70,31.69,17.95,1.52,3.25,2.05,0.00,0.00,0.29,1.29,0.34,0.30,0.00,0.00 Russian_Kursk:Rkuch-53,15.75,12.76,30.22,21.13,2.86,6.92,7.90,0.00,0.00,1.74,0.00,0.74,0.00,0.00,0.00 Russian_Kursk:Rkuch-58,19.65,13.81,29.17,23.85,7.10,0.62,0.00,0.00,2.97,0.00,0.00,1.18,0.80,0.23,0.65 Russian_Orel:Rorl-102,16.80,17.51,27.85,22.42,3.67,3.30,0.00,0.00,2.75,0.47,3.82,0.00,0.40,0.00,1.02 Russian_Orel:Rorl-110,17.34,12.97,30.41,22.19,4.78,9.33,0.00,1.24,0.00,0.68,0.00,0.00,0.00,0.69,0.38 Russian_Orel:Rorl-114,22.10,17.11,25.30,17.15,4.30,5.58,4.58,1.41,0.51,0.00,0.88,1.08,0.00,0.00,0.00 Russian_Orel:Rorl-155,16.77,21.54,31.75,16.20,2.98,4.10,2.81,0.43,0.40,0.00,1.15,1.47,0.21,0.18,0.00 Russian_Pskov:Rps-002,17.44,9.81,34.61,22.76,3.66,7.72,1.09,0.00,0.00,0.00,0.10,1.30,0.00,0.53,0.97 Russian_Pskov:Rps-004,19.18,10.02,37.87,27.10,2.03,0.00,0.00,3.24,0.00,0.00,0.00,0.00,0.57,0.00,0.00 Russian_Pskov:Rps-006,21.84,15.74,36.35,22.29,1.94,0.00,0.00,0.00,0.55,0.00,0.00,0.61,0.00,0.00,0.69 Russian_Pskov:Rps-012,19.01,18.51,30.52,26.71,3.54,0.06,0.00,0.00,0.00,0.00,0.52,0.48,0.00,0.64,0.00 Russian_Pskov:Rps-090,24.20,16.08,30.71,22.60,1.12,2.11,0.00,0.00,0.00,0.00,1.18,0.00,1.53,0.00,0.48 Russian_Pskov:Rps-091,18.48,13.73,29.84,22.97,6.31,3.83,0.00,2.48,0.00,0.00,1.20,0.16,0.00,0.00,0.99 Russian_Pskov:Rps-098,14.58,18.99,31.36,22.43,2.32,6.04,0.05,0.32,0.00,0.00,2.41,0.85,0.10,0.54,0.00 Russian_Ryazan:Rrzm-08,16.48,18.96,27.13,21.46,4.81,8.66,0.44,0.00,0.00,0.00,0.00,0.93,0.41,0.72,0.00 Russian_Ryazan:Rrzm-10,23.05,8.69,30.14,21.63,3.84,4.12,4.94,0.13,0.13,1.00,0.13,1.16,0.20,0.32,0.53 Russian_Ryazan:Rrzm-13,17.30,10.51,29.50,23.38,5.11,6.53,0.00,0.07,1.59,0.00,3.91,1.00,0.29,0.81,0.00 Russian_Ryazan:Rrzm-16,21.42,9.48,32.05,17.97,6.16,3.98,2.86,0.00,4.03,1.15,0.00,0.29,0.10,0.00,0.51 Russian_Ryazan:Rrzm-83,16.22,15.55,28.20,23.24,4.78,8.29,0.00,0.00,0.00,0.00,0.00,1.65,0.19,1.53,0.35 Russian_Ryazan:Rrzs-3,16.93,13.36,34.91,21.79,3.33,0.44,5.85,0.00,0.65,0.00,1.86,0.89,0.00,0.00,0.00 Russian_Ryazan:Rrzs-7,18.90,12.67,27.89,25.18,3.91,6.14,0.00,0.00,0.99,0.87,2.04,1.04,0.00,0.00,0.37 Russian_Ryazan:Rrzs-11,19.89,11.45,26.19,23.96,7.41,5.93,0.00,0.00,2.16,0.00,1.91,1.09,0.00,0.00,0.00 Russian_Ryazan:Rrzs-32,22.56,14.03,29.59,22.33,4.19,2.28,0.00,1.27,0.33,0.00,2.53,0.31,0.00,0.59,0.00 Russian_Ryazan:Rrzs-58,14.47,14.57,30.86,23.08,3.91,5.88,3.47,0.00,2.04,0.00,1.33,0.03,0.19,0.00,0.18 Russian_Ryazan:Rrzs-66,21.11,17.10,29.54,14.23,3.41,9.04,0.00,0.17,1.21,0.00,2.84,0.00,0.25,0.25,0.85 Russian_Ryazan:Rrzs-88,21.53,16.39,24.53,21.44,3.96,4.56,1.92,1.70,0.48,0.22,2.17,0.15,0.95,0.00,0.00 Russian_Smolensk:Rsm-103,15.42,17.04,33.08,21.10,5.60,1.64,1.54,1.19,3.09,0.00,0.21,0.09,0.00,0.00,0.00 Russian_Smolensk:Rsm-109,17.96,16.25,32.23,21.68,6.88,3.49,0.31,0.00,0.00,0.17,0.62,0.00,0.21,0.22,0.00 Russian_Smolensk:Rsm-166,14.64,21.86,32.80,18.34,2.19,6.54,1.93,0.00,1.60,0.00,0.00,0.08,0.02,0.00,0.00 Russian_Smolensk:Rsm-171,16.92,19.50,31.27,21.61,5.46,0.00,2.33,0.05,0.76,0.85,0.00,0.00,0.64,0.61,0.00 Russian_Smolensk:Rsm-176,18.07,10.78,32.26,21.80,4.92,3.28,5.43,0.00,1.55,0.00,0.00,0.75,0.00,1.15,0.00 Russian_Smolensk:Rsm-179,21.10,14.18,29.05,22.09,3.53,4.18,3.26,0.75,0.37,0.41,0.00,0.00,0.39,0.16,0.52 Russian_Smolensk:Rsm-181,19.30,13.44,32.97,20.24,5.86,4.06,1.23,0.00,0.00,0.00,0.00,0.76,0.48,0.00,1.67 Russian_Tver:Rksh-402,18.41,17.73,27.79,23.75,2.74,3.02,0.00,0.00,1.66,0.00,3.28,1.51,0.13,0.00,0.00 Russian_Tver:Rksh-405,16.07,14.08,27.50,23.45,6.67,5.93,1.61,1.59,0.00,0.14,1.40,1.55,0.00,0.00,0.00 Russian_Tver:Rksh-407,17.83,15.53,27.92,24.17,4.25,2.61,0.00,0.04,1.06,0.00,4.31,0.62,0.00,1.66,0.00 Russian_Tver:Rksh-412,18.01,9.78,38.28,19.26,5.07,3.15,3.09,0.00,0.99,0.00,1.59,0.19,0.00,0.00,0.60 Russian_Yaroslavl:RYAR-173,22.36,11.77,32.76,22.72,5.47,0.00,0.00,0.00,0.00,0.00,2.43,1.22,0.40,0.32,0.55 Russian_Yaroslavl:RYAR-223,16.85,15.06,30.89,25.81,5.02,0.04,0.00,0.00,0.00,0.00,3.20,1.49,0.00,1.63,0.00 Russian_Yaroslavl:RYAR-232,22.88,11.91,28.92,22.35,4.64,5.07,0.00,0.00,0.81,0.00,0.95,1.36,1.11,0.00,0.00 #K12b Bashkir_Central:BAS-091,7.49,21.46,0.52,0.11,8.99,33.59,2.27,0.04,1.16,15.01,9.27,0.10 Bashkir_Central:BAS-094,8.49,15.65,1.27,2.27,12.55,38.79,0.38,0.00,2.24,8.77,9.34,0.25 Bashkir_Central:BAS-096,9.31,21.72,0.00,0.24,10.10,35.32,1.53,0.00,1.27,11.75,8.77,0.00 Bashkir_Central:BAS-105,4.42,12.46,1.02,0.00,14.52,44.20,0.31,0.76,2.29,6.42,13.22,0.39 Bashkir_Central:BAS-111,9.96,17.22,0.00,1.59,10.92,39.36,0.00,0.00,0.83,7.25,12.19,0.68 Bashkir_Central:BAS-120,10.88,18.97,0.00,0.00,9.53,30.68,2.10,0.00,1.60,15.28,10.77,0.19 Bashkir_Central:BAS-121,8.30,17.54,0.00,2.33,8.84,39.79,0.76,0.00,2.13,8.32,11.55,0.44 Bashkir_Central:BAS-125,8.60,20.04,0.11,1.70,14.05,37.16,2.04,0.00,2.17,7.33,6.81,0.00 Bashkir_Central:BAS-135,8.47,19.86,0.00,0.00,12.73,35.28,3.14,0.86,0.00,14.01,5.66,0.00 Bashkir_Central:BAS-600,7.93,21.28,0.00,1.43,7.68,34.18,2.24,0.00,0.00,14.98,9.44,0.84 Bashkir_Central:BAS-622,9.13,18.95,1.71,1.78,10.70,33.21,0.00,0.00,3.87,13.77,6.87,0.00 Bashkir_Central:BAS-655,8.65,20.56,2.66,0.00,8.71,36.38,1.64,0.00,0.00,11.57,9.84,0.00 Bashkir_Central:BAS-661,11.64,21.40,0.00,1.30,9.41,38.35,0.44,0.00,0.00,8.46,9.00,0.00 Bashkir_Central:BAS-663,12.19,19.72,0.00,0.99,8.24,39.49,1.69,0.00,1.61,10.61,5.46,0.00 Bashkir_Central:BAS-669,8.75,17.25,0.00,0.00,11.32,41.66,0.00,0.00,0.26,10.19,10.57,0.00 Bashkir_Central:BAS-672,11.04,17.29,0.00,1.74,14.03,38.76,0.48,0.00,1.69,9.90,5.07,0.00 Bashkir_Central:BAS-1392,5.29,13.87,0.00,3.34,10.31,43.91,3.78,0.00,0.00,3.99,15.23,0.28 Bashkir_Central:BAS-1393,10.91,16.79,0.00,1.24,12.68,39.13,2.69,0.00,1.57,5.33,9.67,0.00 Bashkir_Central:BAS-1394,8.04,15.86,0.86,0.22,10.42,37.76,2.75,0.30,2.96,7.80,13.03,0.00 Bashkir_Central:BAS-1396,11.40,14.70,0.00,0.00,11.96,38.92,2.51,0.28,4.27,8.74,7.21,0.00 Bashkir_Central:BAS-1398,8.03,17.97,0.00,0.00,11.47,43.81,0.59,0.00,0.75,6.42,10.95,0.00 Bashkir_Central:BAS-1400,8.28,22.21,0.00,0.72,13.44,39.05,1.50,0.00,1.19,5.09,8.52,0.00 Bashkir_North:BAS-652,10.10,19.59,0.00,0.06,12.11,37.97,3.22,0.00,0.16,10.30,6.48,0.00 Bashkir_North:BAS-670,7.45,17.58,0.00,0.00,11.49,40.53,0.70,0.00,0.00,12.38,9.87,0.00 Bashkir_North:BAS-671,10.17,19.08,0.00,0.00,7.57,44.04,2.94,0.00,0.57,8.51,6.98,0.14 Bashkir_North:BAS-683,8.09,16.48,0.00,0.00,9.94,38.68,0.00,0.00,0.01,12.44,14.36,0.00 Bashkir_North:BAS-811,10.77,16.51,0.00,0.00,14.66,42.48,0.00,0.00,0.57,5.60,7.52,1.89 Bashkir_North:BAS-813,6.06,14.98,2.48,0.00,11.99,44.09,1.15,0.00,0.63,6.58,12.04,0.00 Bashkir_North:BAS-822,7.76,18.15,0.00,0.00,13.75,40.20,2.94,0.26,0.94,6.79,9.20,0.00 Bashkir_North:BAS-825,9.46,17.56,0.00,2.29,7.69,41.81,2.67,0.00,2.42,4.60,11.16,0.33 Bashkir_North:BAS-831,4.40,15.14,0.00,3.30,11.10,47.53,3.42,0.00,0.69,4.25,10.17,0.00 Bashkir_North:BAS-833,8.21,17.98,0.00,0.56,11.45,42.81,2.30,0.00,0.00,6.02,10.67,0.00 Bashkir_North:BAS-834,7.63,17.51,0.00,1.98,13.86,40.42,3.06,0.10,0.00,5.05,10.09,0.29 Bashkir_North:BAS-849,10.42,19.88,0.14,0.00,14.63,38.57,0.91,0.00,0.31,7.43,7.35,0.36 Bashkir_South:BAS-005,11.53,24.17,0.00,0.00,7.39,31.70,2.41,0.00,0.18,17.49,5.12,0.00 Bashkir_South:BAS-006,12.93,25.82,0.00,1.60,4.46,26.27,1.91,0.24,3.81,13.97,8.97,0.00 Bashkir_South:BAS-008,10.09,26.54,0.00,0.16,7.33,28.27,2.05,0.14,0.00,16.35,8.60,0.47 Bashkir_South:BAS-014,8.68,25.52,1.04,0.00,9.00,30.61,3.39,0.00,0.09,14.53,7.15,0.00 Bashkir_South:BAS-017,11.31,24.29,0.00,0.00,6.40,27.82,3.05,0.00,2.02,16.91,8.03,0.17 Bashkir_South:BAS-021,11.77,23.10,0.00,1.29,8.24,27.99,3.16,0.59,0.00,16.77,6.75,0.35 Bashkir_South:BAS-029,15.73,23.67,0.00,1.90,4.96,32.54,2.82,0.00,0.54,13.48,4.30,0.06 Bashkir_South:BAS-031,9.62,23.80,1.81,0.09,4.06,29.75,1.21,0.00,0.00,21.11,8.54,0.00 Bashkir_South:BAS-033,12.96,25.90,0.00,0.67,8.83,24.54,1.67,0.00,0.00,16.24,9.19,0.00 Bashkir_South:BAS-034,11.25,23.97,0.00,1.23,6.56,28.24,2.41,0.82,0.00,17.79,7.71,0.00 Bashkir_South:BAS-042,11.76,26.64,2.02,1.88,9.02,30.75,2.51,0.00,0.00,12.35,3.07,0.00 Bashkir_South:BAS-045,11.46,23.43,0.00,2.37,9.95,25.32,1.09,0.00,0.00,16.58,9.53,0.28 Bashkir_South:BAS-046,8.58,23.90,0.24,0.00,7.31,30.44,0.45,0.00,0.00,16.31,12.75,0.00 Bashkir_South:BAS-060,10.06,24.24,0.95,0.00,4.82,31.27,1.87,0.00,0.23,18.13,8.24,0.18 Bashkir_South:BAS-062,11.69,24.62,0.00,0.00,8.11,30.54,0.00,0.00,0.00,17.48,7.46,0.12 Bashkir_South:BAS-150,8.77,22.28,0.00,5.36,8.65,28.04,0.00,0.56,0.48,12.47,13.07,0.30 Bashkir_South:BAS-153,12.87,21.21,0.68,0.96,9.47,30.16,2.47,0.00,0.74,13.06,7.66,0.72 Bashkir_South:BAS-156,8.58,25.36,0.00,1.17,5.13,34.69,2.21,0.00,0.89,13.89,7.86,0.22 Bashkir_South:BAS-164,10.79,20.76,0.00,4.18,12.39,32.03,0.00,0.00,0.00,13.99,5.86,0.00 Russian_Arkhangelsk_Krasnoborsky:Rakr-203,6.97,5.53,0.00,1.65,17.48,60.12,0.39,0.00,0.71,2.78,4.39,0.00 Russian_Arkhangelsk_Krasnoborsky:Rakr-205,3.97,4.98,0.39,0.00,17.53,56.57,0.30,0.02,1.49,3.70,11.06,0.00 Russian_Arkhangelsk_Krasnoborsky:Rakr-237,3.06,7.82,0.00,0.00,20.37,57.51,0.10,0.00,0.47,1.86,8.80,0.00 Russian_Arkhangelsk_Krasnoborsky:Rakr-248,5.44,8.42,0.00,0.00,18.36,60.97,1.97,0.00,0.58,0.00,4.25,0.00 Russian_Arkhangelsk_Krasnoborsky:Rakr-341,3.94,9.77,0.00,0.00,19.81,60.20,1.31,0.00,0.00,0.78,4.19,0.00 Russian_Arkhangelsk_Krasnoborsky:Rakr-345,5.23,7.98,1.18,0.04,19.28,59.08,0.08,0.00,0.00,0.50,6.63,0.00 Russian_Arkhangelsk_Leshukonsky:Rakrlsh-002,7.72,11.44,0.00,0.75,11.20,60.96,0.75,0.00,2.11,2.41,2.66,0.00 Russian_Arkhangelsk_Leshukonsky:Rakrlsh-140,2.70,12.25,0.00,0.49,16.52,58.01,0.77,0.95,0.15,3.43,4.74,0.00 Russian_Arkhangelsk_Leshukonsky:Rakrlsh-143,3.71,13.66,0.00,1.24,10.95,57.87,1.43,0.61,1.17,0.00,9.21,0.15 Russian_Arkhangelsk_Leshukonsky:Rakrlsh-144,6.05,14.94,0.00,0.00,9.67,63.54,0.73,0.41,0.00,0.31,4.34,0.00 Russian_Arkhangelsk_Leshukonsky:Rakrlsh-149,5.17,9.74,1.41,1.53,12.26,58.94,1.25,0.00,2.79,0.85,6.06,0.00 Russian_Arkhangelsk_Pinezhsky:RPin-114,4.60,8.21,0.00,1.46,17.65,63.21,0.00,0.80,0.00,0.84,3.11,0.12 Russian_Arkhangelsk_Pinezhsky:RPin-123,4.83,10.39,1.71,0.00,17.29,61.79,2.27,0.00,0.01,0.00,1.70,0.00 Russian_Arkhangelsk_Pinezhsky:RPin-143,5.57,9.29,0.00,1.57,14.06,61.57,0.49,0.00,0.00,0.03,7.42,0.00 Russian_Arkhangelsk_Pinezhsky:RPin-145,0.00,9.23,0.51,0.53,12.08,64.01,2.02,0.00,1.63,1.04,7.94,1.01 Russian_Arkhangelsk_Pinezhsky:RPin-151,5.03,10.42,0.00,0.04,16.21,63.80,1.54,0.59,0.00,0.99,1.36,0.00 Russian_Belgorod:Rbgp-200,3.90,2.33,0.00,0.00,22.05,57.21,0.00,0.00,2.15,0.92,11.45,0.00 Russian_Belgorod:Rbgp-201,2.49,2.39,0.42,0.28,19.96,57.88,0.48,0.00,1.03,0.00,14.90,0.16 Russian_Belgorod:Rbgp-205,1.45,0.65,0.00,0.29,20.22,60.06,2.01,0.00,2.67,0.42,12.22,0.00 Russian_Kaluga:Rkbo-12,2.46,0.89,0.26,0.66,19.97,60.37,1.29,0.00,3.89,0.00,10.21,0.00 Russian_Kaluga:Rkbo-16,1.69,3.74,0.00,0.85,17.51,57.08,0.57,0.00,1.75,0.19,16.62,0.00 Russian_Kaluga:Rkbo-58,1.40,1.71,0.29,0.00,19.51,63.58,0.00,0.00,1.36,0.00,12.15,0.00 Russian_Kursk:Rkuch-03,1.27,2.81,0.00,0.00,17.36,61.16,0.00,0.30,4.65,0.00,12.44,0.00 Russian_Kursk:Rkuch-05,3.34,1.06,0.00,0.00,20.83,60.01,0.10,0.00,1.26,1.66,11.73,0.00 Russian_Kursk:Rkuch-53,4.14,1.78,0.01,1.08,19.35,55.05,0.50,0.00,0.01,0.00,17.79,0.30 Russian_Kursk:Rkuch-58,4.49,0.64,0.00,0.02,20.31,57.41,4.39,0.00,1.81,0.00,10.63,0.30 Russian_Orel:Rorl-102,5.78,4.60,0.00,0.00,16.00,56.49,1.29,0.40,1.22,1.98,12.25,0.00 Russian_Orel:Rorl-110,3.43,0.00,0.00,0.86,18.82,58.16,1.62,1.16,0.05,0.00,15.90,0.00 Russian_Orel:Rorl-114,2.50,2.53,1.86,0.00,21.91,53.07,0.92,0.00,2.13,0.00,15.07,0.00 Russian_Orel:Rorl-155,2.84,1.40,0.00,0.00,20.80,56.69,2.21,0.00,0.99,0.55,14.05,0.48 Russian_Pskov:Rps-002,2.01,2.25,0.00,0.00,18.79,60.71,1.35,0.28,1.19,0.00,12.76,0.65 Russian_Pskov:Rps-004,3.28,0.00,0.00,0.00,18.20,66.84,2.22,0.00,3.40,0.00,6.06,0.00 Russian_Pskov:Rps-012,1.58,2.08,0.24,0.97,22.99,63.38,0.01,0.00,0.93,0.00,7.81,0.00 Russian_Pskov:Rps-090,3.29,2.68,0.00,0.76,23.42,62.50,0.00,0.00,0.00,0.04,6.23,1.06 Russian_Pskov:Rps-091,3.02,2.15,0.00,0.79,19.79,59.66,0.00,0.00,4.04,0.00,10.55,0.00 Russian_Pskov:Rps-098,2.91,2.52,0.00,0.00,20.43,59.08,1.78,0.00,0.12,0.00,12.85,0.31 Russian_Ryazan:Rrzm-08,2.32,3.69,0.00,0.00,20.15,56.30,0.22,0.00,2.14,0.03,14.89,0.26 Russian_Ryazan:Rrzm-10,0.31,3.13,1.83,0.17,19.92,57.31,0.22,0.87,1.20,0.00,14.43,0.60 Russian_Ryazan:Rrzm-13,4.85,5.09,0.72,0.00,18.30,57.60,0.09,0.00,0.83,1.01,11.51,0.00 Russian_Ryazan:Rrzm-16,7.20,2.34,0.00,0.12,21.81,53.59,2.73,0.00,0.47,0.00,11.73,0.00 Russian_Ryazan:Rrzm-83,6.92,2.26,0.19,0.20,18.69,57.12,0.23,0.00,0.00,0.18,14.21,0.00 Russian_Ryazan:Rrzs-3,2.71,3.82,0.00,0.00,22.52,58.33,1.27,0.00,0.65,0.00,10.70,0.00 Russian_Ryazan:Rrzs-7,6.76,2.54,0.07,0.00,18.71,56.78,1.19,0.00,0.37,1.80,11.79,0.00 Russian_Ryazan:Rrzs-11,6.39,4.55,0.00,0.00,24.11,55.69,1.32,0.00,0.00,0.00,7.94,0.00 Russian_Ryazan:Rrzs-32,4.44,3.33,0.29,0.00,21.60,59.99,0.48,0.00,0.80,0.00,9.06,0.00 Russian_Ryazan:Rrzs-58,3.34,2.91,0.76,0.53,17.51,58.45,1.41,0.00,0.53,0.00,14.56,0.00 Russian_Ryazan:Rrzs-66,5.10,3.30,0.00,0.00,22.21,54.98,1.45,0.71,0.00,0.66,11.59,0.00 Russian_Smolensk:Rsm-103,2.22,2.51,0.00,0.00,21.90,58.05,0.53,0.00,2.32,0.00,11.83,0.64 Russian_Smolensk:Rsm-109,4.75,1.43,0.43,0.00,24.19,57.95,0.00,0.00,0.00,0.00,11.25,0.00 Russian_Smolensk:Rsm-166,9.22,1.97,0.00,0.00,22.24,54.56,0.07,0.42,0.13,0.00,11.40,0.00 Russian_Smolensk:Rsm-171,3.26,0.77,0.00,1.89,22.57,59.16,0.59,0.00,1.16,0.00,10.60,0.00 Russian_Smolensk:Rsm-176,6.44,0.41,0.00,0.36,21.38,54.07,1.36,0.34,3.98,0.00,11.66,0.00 Russian_Smolensk:Rsm-179,5.35,2.32,0.00,0.00,21.38,58.04,0.46,0.14,2.57,0.00,9.73,0.00 Russian_Smolensk:Rsm-181,0.00,0.00,1.34,2.06,20.27,58.68,2.18,0.00,0.34,0.00,14.95,0.19 Russian_Tver:Rksh-402,5.54,4.45,0.00,1.45,19.68,57.35,1.48,0.00,0.00,0.00,9.69,0.37 Russian_Tver:Rksh-405,2.45,4.08,0.39,0.03,18.02,55.36,0.00,0.00,4.45,0.00,14.74,0.45 Russian_Tver:Rksh-407,4.58,3.63,4.36,0.00,18.28,56.77,0.06,0.00,0.00,1.87,9.88,0.57 Russian_Tver:Rksh-412,3.23,2.90,0.00,0.00,21.45,59.62,0.06,0.00,2.38,0.00,10.36,0.00 Russian_Vologda:HGDP00879,3.58,9.15,0.00,0.00,11.71,66.78,0.04,0.00,1.63,0.00,7.11,0.00 Russian_Vologda:HGDP00880,7.65,7.68,0.00,2.49,16.61,57.47,0.00,0.00,1.23,0.00,6.86,0.00 Russian_Vologda:HGDP00882,5.23,6.14,0.14,0.19,18.94,57.86,2.06,0.00,3.50,1.72,4.21,0.00 Russian_Vologda:HGDP00883,3.27,7.36,0.00,0.00,12.86,66.26,0.03,0.00,0.08,1.47,8.66,0.00 Russian_Vologda:HGDP00884,2.50,5.99,0.00,0.00,14.99,64.53,2.86,0.00,2.08,0.00,7.05,0.00 Russian_Vologda:HGDP00887,2.17,7.59,0.00,0.00,18.81,61.41,0.00,0.32,2.20,0.98,6.53,0.00 Russian_Vologda:HGDP00888,3.96,6.96,0.00,0.00,14.13,62.43,0.60,0.00,3.09,0.00,8.82,0.00 Russian_Vologda:HGDP00889,0.00,6.34,0.00,0.00,14.06,66.17,1.26,0.00,0.92,0.46,10.79,0.00 Russian_Vologda:HGDP00890,1.59,8.04,0.03,0.77,16.40,63.94,1.15,0.00,0.00,0.00,8.07,0.00 Russian_Vologda:HGDP00891,1.24,5.19,0.00,0.00,10.61,64.08,0.48,0.00,2.54,3.98,11.89,0.00 Russian_Vologda:HGDP00892,3.02,6.68,0.00,0.00,10.88,69.65,0.78,0.00,1.20,0.00,7.78,0.00 Russian_Vologda:HGDP00893,0.82,10.94,0.43,0.00,11.98,64.02,0.43,0.00,0.00,1.16,10.23,0.00 Russian_Vologda:HGDP00894,6.91,9.68,1.74,0.00,17.26,58.00,0.00,0.00,0.00,0.00,6.41,0.00 Russian_Vologda:HGDP00895,5.85,8.59,0.00,0.00,12.98,64.78,1.54,0.31,0.00,2.02,3.94,0.00 Russian_Vologda:HGDP00896,2.52,8.30,0.00,0.00,11.88,64.70,1.13,0.00,3.08,1.04,7.35,0.00 Russian_Vologda:HGDP00897,0.00,6.15,0.00,2.31,10.31,65.74,1.59,0.00,3.60,0.00,10.31,0.00 Russian_Vologda:HGDP00898,3.71,8.75,0.27,0.41,11.60,65.90,1.86,0.00,0.00,0.00,7.51,0.00 Russian_Vologda:HGDP00899,5.20,6.46,0.00,1.01,18.86,55.98,0.00,0.16,0.93,1.43,9.86,0.11 Russian_Vologda:HGDP00900,1.22,4.47,0.57,0.66,11.38,64.96,2.92,0.00,1.84,0.00,11.98,0.00 Russian_Vologda:HGDP00901,2.41,8.53,0.00,0.34,18.00,59.45,0.00,0.00,0.40,0.80,10.08,0.00 Russian_Vologda:HGDP00902,4.07,6.46,1.11,0.00,12.26,64.29,2.13,0.00,0.00,0.98,8.69,0.00 Russian_Vologda:HGDP00903,0.26,7.01,0.00,0.79,12.55,62.41,0.00,0.00,2.63,0.90,13.46,0.00 Russian_Yaroslavl:RYAR-173,3.88,3.61,2.46,0.00,20.60,59.38,0.00,0.00,0.32,0.59,9.15,0.00 Russian_Yaroslavl:RYAR-223,1.33,5.01,0.22,0.00,18.21,60.78,0.26,0.45,1.56,1.38,10.81,0.00 Russian_Yaroslavl:RYAR-232,4.87,3.47,0.00,0.00,21.18,59.83,1.88,0.03,0.00,0.00,8.73,0.00

K12b updated already has Bashkirs divided under Bashkir_North, Bashkir_Central, and Bashkir_South, but it might use a different division than my samples, because I divided the samples based on their latitude rounded to the nearest integer: 53 for South, 55 for Central, and 56 for North.

I omitted the samples from Vologda from K13, because some of them got over 60% Baltic, and two samples from Vologda and one sample from Pskov even got over 99.5% Baltic. I also omitted the samples from Vologda from K15, because some of them got over 90% Eastern_Euro. And I omitted 4 Russian samples from K12b, because they got over 90% North_European.

Here's a PLINK PCA of the same samples:

https://i.ibb.co/xJKNXtm/bashkir-russian.png

Quote:

Originally Posted by vbnetkhio

I ran these which were missing in your sheet:

Oh, I figured out why they were missing. I ran the samples in two batches. In the second batch, I omitted samples where my target directory already had a file with the same basename without extension as the sample, but the target directory only had PLINK log files for the samples and not 23andme raw data files.
10-25-2021, 09:14 PM
Leto

The Vologda samples were in the original Dodecad spreadsheet too.

I made the Bashkir averages but the North-Center-South division was made according to the disticts the samples were taken from.
10-25-2021, 09:17 PM
Leto

Too fucking bad you cannot convert data to G25 format. xD Literally no one wants to convert the Tajiks and Kumyks from Yunusbayev. What a fucking pity!
10-26-2021, 09:51 AM
Lucas

Quote:

Originally Posted by Komintasavalta

In the PCA below, the outliers in the top left corner of the plot got something like 99.5% or 99.7% of Baltic. I don't know if it's because they were used as reference samples in K13. LTG-356 is an outlier because it only got 21.48% North_Atlantic, 74.47% Baltic, and 4.05% West_Med, and 0% all other components. LTG-441 is closest to Russian_Kargopol and LTG-566 is closest to Russian_average.
.

I said it before. During such big runs always few random samples have strange results like this. Try to check them again separately, should be normal. And I am sure they are not references in old K13 it was different survey so it is not calc effect.

BTW Vologda Russians are references everywhere so they are score those high values for real unlike those new Lithuanians.

Quote:

Originally Posted by Lucas

I said it before. During such big runs always few random samples have strange results like this. Try to check them again separately, should be normal. And I am sure they are not references in old K13 it was different survey so it is not calc effect.

BTW Vologda Russians are references everywhere so they are score those high values for real unlike those new Lithuanians.

Actually I think you need to make the tolerance parameter (`-t`) smaller (https://github.com/stevenliuyi/admix#faq):

This package utilizes the optimization function `scipy.optimize.minimize` from the SciPy library, which has a parameter `tol` to control the tolerance for termination of the optimizer. The default tolerance is set to `1e-3` here. It works most of time, but sometimes `1e-3` is too big and causes early termination. You can manually set a smaller tolerance (say `1e-4`) to obtain correct results, although it will take longer to run the optimizer.

michal3141 also got the wrong results in K36 by using the default threshold, and he said that "probably e-7 or at least e-6 is the way to go": https://anthrogenica.com/showthread....l=1#post810669.

When I tried doing another run of one of the samples from Vologda that got over 99% Baltic (HGDP00899), it first got the same results, because the algorithm doesn't use a random seed like ADMIXTURE, but it gives the same result each time. After I decreased the tolerance to 1e-4, the results started to resemble other samples from Vologda. Between 1e-4 and 1e-5, some admixture proportions still changed by more than 0.3 percentage points, but there was no further change between 1e-5 and 1e-6:

Code:

~ admix -f a.txt -mK13 Admixture calculation models: K13 Calcuation is started... K13 North_Atlantic: 0.12% Baltic: 99.76% West_Med: 0.00% West_Asian: 0.00% East_Med: 0.00% Red_Sea: 0.00% South_Asian: 0.00% East_Asian: 0.00% Siberian: 0.07% Amerindian: 0.00% Oceanian: 0.05% Northeast_African: 0.00% Sub-Saharan: 0.00% ~ admix -f a.txt -mK13 -t1e-4 Admixture calculation models: K13 Calcuation is started... K13 North_Atlantic: 3.95% Baltic: 71.60% West_Med: 5.06% West_Asian: 2.74% East_Med: 6.62% Red_Sea: 0.67% South_Asian: 0.00% East_Asian: 0.16% Siberian: 6.24% Amerindian: 1.26% Oceanian: 1.31% Northeast_African: 0.04% Sub-Saharan: 0.36% ~ admix -f a.txt -mK13 -t1e-5 Admixture calculation models: K13 Calcuation is started... K13 North_Atlantic: 4.09% Baltic: 71.69% West_Med: 4.73% West_Asian: 2.64% East_Med: 6.46% Red_Sea: 0.91% South_Asian: 0.00% East_Asian: 0.11% Siberian: 6.05% Amerindian: 1.37% Oceanian: 1.55% Northeast_African: 0.03% Sub-Saharan: 0.36% ~ admix -f a.txt -mK13 -t1e-6 Admixture calculation models: K13 Calcuation is started... K13 North_Atlantic: 4.09% Baltic: 71.69% West_Med: 4.73% West_Asian: 2.64% East_Med: 6.46% Red_Sea: 0.91% South_Asian: 0.00% East_Asian: 0.11% Siberian: 6.05% Amerindian: 1.37% Oceanian: 1.55% Northeast_African: 0.03% Sub-Saharan: 0.36%

I ran K13 at different tolerance parameters for all 87 samples from the Reich dataset with the population name "Russian", because they included some problematic samples in my earlier K13 run. Now the average difference in the admixture percentages became less than 0.01 between 1e-4 and 1e-5, and less than 0.0001 between 1e-5 and 1e-6:

Tolerance Average difference in admixture percentages
compared to previous tolerance Running time
per sample

1e-1 - 1.22

1e-2 3.144810 1.65

1e-3 3.515349 3.12

1e-4 0.316737 3.47

1e-5 0.002387 3.64

1e-6 0.000097 3.51

1e-7 0.000062 3.65

1e-8 0.000088 3.65

So it's probably better to change the tolerance to at least 1e-5, even though in this case even 1e-8 was about as fast.

10-26-2021, 12:05 PM
Lucas

Quote:

Originally Posted by Komintasavalta

Actually I think you need to make the tolerance parameter (`-t`) smaller (https://github.com/stevenliuyi/admix#faq):

This package utilizes the optimization function `scipy.optimize.minimize` from the SciPy library, which has a parameter `tol` to control the tolerance for termination of the optimizer. The default tolerance is set to `1e-3` here. It works most of time, but sometimes `1e-3` is too big and causes early termination. You can manually set a smaller tolerance (say `1e-4`) to obtain correct results, although it will take longer to run the optimizer.

So it's probably better to change the tolerance to at least 1e-5, even though in this case even 1e-8 was about as fast.

Yes, you are right indeed. Must be this causing problems sometimes. In original calc files for all calculators in .par file is by default used 1d-7 parameter (not 1e). Now is evident it makes sense.
10-26-2021, 12:58 PM
Leto

Hey Komin, what is Komi_Siberia? Another mixed group?

Target: Komi_Siberian
Distance: 0.3028% / 0.30276589 | R3P
51.6 Khanty
37.3 North_Russian
11.1 Russian_Oryol

Looks like a biracial Khanty-Russian mix :D The two principal Komi subgroups, the Zyryans and the Permyaks all live west of the Urals.

Quote:

Originally Posted by Lucas

Yes, you are right indeed. Must be this causing problems sometimes. In original calc files for all calculators in .par file is by default used 1d-7 parameter (not 1e). Now is evident it makes sense.

I'll start to use 1e-7 too then. DIYDodecad was made with Fortran, and 1d-7 is Fortran syntax for specifying a double.

Here's fixed averages made with `-t 1e-7`. I now also excluded one Tofalar sample with high Caucasoid ancestry. I omitted 19 out of 22 samples from Vologda from K13 because they scored over 60% Baltic, and most even scored over 70%, but the few samples from Vologda that didn't suffer from the calculator effect only got 49% Baltic on average. I also omitted the same samples from Vologda from K15.

Code:

#K13, Reich Bashkir_Central,15.64,31.88,3.15,12.27,3.05,0.74,3.52,5.41,21.15,2.23,0.36,0.23,0.37 Bashkir_North,17.00,34.88,3.73,10.73,2.31,0.60,3.85,4.42,19.45,1.86,0.59,0.23,0.37 Bashkir_South,12.75,24.85,1.26,13.47,1.15,0.30,4.20,9.62,28.69,2.98,0.34,0.17,0.22 Russian_Archangelsk_Krasnoborsky,28.17,47.65,5.02,4.22,1.93,0.57,2.25,0.85,7.70,0.93,0.45,0.25,0.00 Russian_Archangelsk_Leshukonsky,25.10,48.98,2.02,4.35,0.93,0.41,1.43,0.29,12.83,1.83,0.76,0.53,0.54 Russian_Archangelsk_Pinezhsky,26.34,51.18,3.49,2.85,0.91,0.16,2.27,0.33,9.33,1.84,0.55,0.57,0.20 Russian_Belgorod,23.61,47.87,11.19,5.60,6.10,1.40,0.36,0.49,2.03,0.53,0.47,0.34,0.00 Russian_Kaluga,28.40,48.45,6.76,4.02,5.78,1.72,1.10,0.00,2.06,1.16,0.24,0.00,0.34 Russian_Kursk,26.60,47.80,7.64,4.88,7.31,0.35,0.92,0.74,1.90,0.91,0.37,0.41,0.18 Russian_Orel,27.62,44.88,8.10,6.22,6.20,1.00,1.26,0.69,2.34,0.84,0.16,0.35,0.33 Russian_Pskov,26.08,52.91,7.78,5.09,1.91,1.44,0.50,0.00,1.89,0.84,0.53,0.48,0.56 Russian_Ryazan,25.00,47.16,8.76,7.31,4.37,0.59,1.48,0.37,2.78,1.05,0.36,0.53,0.24 Russian_Smolensk,26.24,48.27,9.35,4.46,6.54,0.41,1.56,0.65,0.70,0.63,0.42,0.40,0.37 Russian_Tver,24.04,49.02,9.38,6.68,2.17,1.20,1.42,0.16,3.91,1.26,0.14,0.52,0.11 Russian_Vologda,24.60,49.08,7.98,3.85,1.74,0.00,3.08,0.00,6.61,2.00,0.16,0.17,0.74 Russian_Yaroslavl,26.40,50.28,9.30,4.97,0.55,0.69,0.62,0.00,3.72,1.64,0.71,0.88,0.23 Aleut,15.27,35.26,3.11,4.56,1.59,0.43,1.38,3.07,17.01,17.26,0.51,0.19,0.33 Enets,4.66,15.37,0.28,0.91,0.00,0.37,1.70,1.02,70.19,4.12,0.69,0.00,0.69 Itelmen,0.00,4.38,0.00,0.00,0.00,0.00,1.82,12.25,62.76,17.18,1.06,0.00,0.54 Kalmyk,2.55,5.75,0.80,6.78,1.15,0.36,0.84,30.85,48.42,1.56,0.55,0.06,0.36 Karelian,30.33,50.92,4.10,1.41,0.82,0.68,1.40,0.26,7.58,1.28,0.58,0.49,0.16 Kusunda,0.97,0.00,0.89,3.37,0.00,0.00,31.42,40.74,18.24,0.87,2.46,0.71,0.35 Mansi,8.40,30.52,0.00,4.71,0.00,0.00,4.25,1.90,43.88,5.29,0.76,0.15,0.13 Nasioi,0.07,0.51,0.33,0.00,0.17,0.20,4.46,21.25,0.22,0.23,72.25,0.04,0.29 Newar,1.05,2.41,1.13,9.15,0.30,0.64,37.11,30.97,14.65,0.99,1.01,0.09,0.51 Nganasan,0.00,2.97,0.00,0.00,0.03,0.01,0.43,0.41,93.88,1.75,0.22,0.03,0.26 Nogai_Astrakhan,9.15,14.62,4.35,11.10,4.02,1.04,1.57,19.77,31.69,1.61,0.72,0.20,0.16 Nogai_Karachay_Cherkessia,4.75,15.83,7.60,37.42,5.82,1.30,1.51,8.53,14.96,0.96,0.68,0.57,0.06 Nogai_Stavropol,9.78,13.60,3.46,17.20,4.09,0.77,3.39,17.33,27.75,1.39,0.81,0.13,0.29 Tatar_Mishar,22.05,36.75,6.64,10.80,3.49,0.56,2.66,4.01,11.19,1.26,0.12,0.15,0.33 Tatar_Siberian,11.36,22.66,0.76,12.78,1.02,0.76,3.86,10.60,31.58,3.63,0.42,0.19,0.37 Tatar_Siberian_Zabolotniye,8.03,28.55,0.00,9.07,0.00,0.00,4.27,6.27,39.17,3.73,0.43,0.08,0.40 Thai,0.69,1.99,0.91,0.76,0.59,0.70,15.28,72.43,3.19,0.82,2.25,0.19,0.19 Tharu,0.69,1.48,1.94,7.63,0.11,0.02,37.16,32.53,15.52,0.88,1.77,0.14,0.12 Tlingit,10.18,25.66,0.88,4.12,0.12,0.00,1.81,4.69,24.46,26.98,0.14,0.45,0.52 Todzin,0.00,8.49,0.23,1.52,0.00,0.22,3.29,13.04,69.15,3.40,0.54,0.00,0.12 Tofalar,0.07,8.03,0.09,1.43,0.00,0.35,1.28,12.84,71.34,3.49,0.94,0.10,0.04 Ulchi,0.00,0.06,0.07,0.00,0.00,0.03,0.13,31.83,64.44,2.97,0.32,0.09,0.07 Veps,27.02,52.08,3.78,1.59,0.97,1.23,1.62,0.17,8.99,1.44,0.60,0.19,0.32 Yukagir_Forest,13.18,28.14,3.71,1.11,3.10,0.61,1.46,4.39,40.97,2.04,0.34,0.39,0.56 Yukagir_Tundra,0.00,2.99,0.00,0.12,0.01,0.10,1.05,8.37,78.20,8.07,0.64,0.08,0.37 #K13, Cardona 2014 Altaian_Teleut,6.62,15.20,0.00,8.71,0.00,0.22,2.51,19.65,42.29,3.61,0.63,0.35,0.20 Forest_Nenets,1.66,19.86,0.00,1.48,0.00,0.01,3.26,1.00,66.86,5.05,0.55,0.02,0.26 Komi_Siberian,17.18,40.27,2.10,5.42,0.35,0.30,2.29,1.03,27.39,2.96,0.38,0.13,0.18 Tundra_Nenets,3.23,20.09,0.20,2.18,0.00,0.03,3.44,1.54,63.99,4.75,0.32,0.10,0.12 #K15, Reich Bashkir_Central,13.49,7.21,13.69,22.00,1.07,9.26,1.59,0.51,3.42,5.35,19.72,1.96,0.30,0.15,0.30 Bashkir_North,13.09,8.92,16.01,23.59,1.13,7.65,0.71,0.35,3.73,4.30,17.92,1.65,0.44,0.21,0.30 Bashkir_South,10.87,4.87,9.55,19.32,0.29,10.22,0.33,0.13,4.28,9.49,27.27,2.83,0.26,0.09,0.20 Russian_Archangelsk_Krasnoborsky,21.90,15.16,26.36,23.16,1.27,1.34,0.54,0.26,1.71,0.70,6.31,0.75,0.35,0.18,0.00 Russian_Archangelsk_Leshukonsky,21.35,10.89,23.54,27.21,0.51,0.81,0.12,0.18,1.13,0.10,11.23,1.64,0.64,0.28,0.38 Russian_Archangelsk_Pinezhsky,21.02,12.63,24.46,28.27,1.06,0.66,0.00,0.00,1.49,0.28,7.52,1.73,0.41,0.38,0.07 Russian_Belgorod,18.05,14.69,30.80,20.34,6.35,4.39,2.15,1.01,0.24,0.41,0.58,0.36,0.28,0.37,0.00 Russian_Kaluga,20.85,15.76,31.00,20.91,2.69,3.30,1.32,1.38,0.86,0.00,0.68,0.92,0.13,0.00,0.20 Russian_Kursk,20.98,13.50,29.60,22.28,3.50,2.94,3.90,0.06,0.74,0.51,0.79,0.56,0.28,0.11,0.26 Russian_Orel,18.25,17.29,28.84,19.48,3.93,5.58,1.85,0.77,0.92,0.28,1.46,0.64,0.15,0.22,0.35 Russian_Pskov,19.25,14.69,33.04,23.83,2.99,2.82,0.16,0.86,0.08,0.00,0.78,0.49,0.31,0.24,0.45 Russian_Ryazan,19.17,13.56,29.21,21.65,4.56,5.47,1.63,0.28,1.12,0.27,1.56,0.71,0.22,0.35,0.23 Russian_Smolensk,17.63,16.14,31.97,20.99,4.90,3.33,2.30,0.28,1.04,0.20,0.12,0.24,0.25,0.30,0.32 Russian_Tver,17.48,14.68,30.17,22.77,4.72,3.51,1.10,0.41,0.99,0.04,2.66,0.95,0.04,0.41,0.06 Russian_Vologda,16.63,15.64,26.89,26.81,3.22,0.92,0.14,0.00,2.44,0.00,5.02,1.62,0.03,0.00,0.64 Russian_Yaroslavl,20.68,12.86,30.85,23.65,5.09,1.69,0.00,0.00,0.27,0.00,2.17,1.39,0.50,0.66,0.19 Aleut,13.39,6.61,19.19,19.15,1.19,2.12,0.57,0.12,1.23,3.14,15.75,16.78,0.42,0.12,0.22 Enets,3.15,1.82,2.29,15.80,0.14,0.00,0.00,0.10,1.20,1.39,69.09,3.80,0.62,0.00,0.59 Itelmen,0.00,0.06,0.10,5.40,0.00,0.00,0.00,0.00,1.55,12.88,61.69,16.92,0.96,0.00,0.44 Kalmyk,2.00,0.91,1.26,6.42,0.35,5.81,0.96,0.35,0.86,31.31,47.32,1.62,0.50,0.05,0.28 Karelian,24.98,15.04,23.60,25.41,1.74,0.26,0.01,0.08,0.67,0.14,6.18,1.07,0.44,0.28,0.10 Kusunda,0.76,0.16,0.12,0.50,1.02,1.62,0.00,0.00,32.50,41.52,17.50,0.93,2.46,0.52,0.40 Mansi,9.98,1.12,5.60,28.97,0.00,0.69,0.00,0.00,3.76,2.08,42.05,4.93,0.69,0.04,0.09 Nasioi,0.04,0.03,0.69,0.00,0.18,0.00,0.01,0.11,3.91,21.82,0.21,0.22,72.52,0.01,0.26 Newar,1.17,1.23,1.03,3.08,0.82,5.42,0.08,0.68,38.66,31.38,13.98,0.99,0.87,0.10,0.51 Nganasan,0.00,0.03,0.20,3.15,0.00,0.00,0.00,0.00,0.23,0.57,93.75,1.56,0.22,0.02,0.26 Nogai_Astrakhan,7.23,4.91,5.79,11.06,2.37,9.23,3.82,0.87,1.71,19.96,30.37,1.68,0.71,0.14,0.15 Nogai_Karachay_Cherkessia,3.58,5.97,9.22,8.31,2.88,39.22,3.05,1.16,1.97,8.01,14.45,0.93,0.58,0.65,0.01 Nogai_Stavropol,8.62,4.49,4.78,11.21,1.69,14.53,3.76,0.75,3.66,17.36,26.68,1.38,0.75,0.08,0.26 Tatar_Mishar,15.11,13.11,19.62,21.62,3.20,7.78,1.83,0.20,2.51,3.72,9.93,0.98,0.06,0.08,0.26 Tatar_Siberian,9.28,4.63,7.32,19.39,0.11,9.36,0.43,0.47,3.98,10.70,30.11,3.39,0.33,0.14,0.36 Tatar_Siberian_Zabolotniye,9.40,1.11,8.05,24.82,0.00,4.26,0.00,0.00,4.32,6.28,37.55,3.46,0.37,0.00,0.38 Thai,0.59,0.44,1.01,0.74,0.89,0.39,0.03,0.76,15.50,73.31,2.98,0.71,2.22,0.18,0.24 Tharu,0.15,0.56,0.77,2.89,1.28,5.15,0.19,0.00,38.37,32.94,14.80,0.93,1.71,0.15,0.12 Tlingit,10.21,2.20,14.14,14.20,0.00,1.72,0.00,0.00,2.11,4.95,23.40,26.38,0.06,0.11,0.53 Todzin,0.08,0.04,0.78,10.22,0.01,0.40,0.00,0.09,2.94,13.57,68.09,3.24,0.47,0.00,0.08 Tofalar,0.09,0.06,0.06,10.61,0.06,0.11,0.00,0.23,1.00,13.39,70.21,3.23,0.87,0.06,0.05 Ulchi,0.00,0.00,0.02,0.11,0.04,0.00,0.00,0.03,0.24,32.49,63.02,3.35,0.39,0.19,0.11 Veps,21.73,14.20,25.50,26.83,0.86,0.16,0.07,0.37,0.77,0.09,7.59,1.12,0.41,0.17,0.12 Yukagir_Forest,10.30,7.62,14.57,14.81,2.25,0.82,0.70,0.36,1.16,4.46,40.01,1.77,0.38,0.26,0.55 Yukagir_Tundra,0.01,0.00,0.50,3.07,0.05,0.08,0.00,0.11,0.75,8.85,77.66,7.92,0.59,0.03,0.37 #K13, Cardona 2014 Altaian_Teleut,6.44,1.97,3.06,15.03,0.00,5.34,0.00,0.10,2.72,19.79,41.07,3.52,0.52,0.21,0.21 Forest_Nenets,2.38,0.19,1.18,21.60,0.00,0.03,0.00,0.00,2.55,1.16,65.58,4.68,0.47,0.02,0.16 Komi_Siberian,13.73,8.14,16.26,28.19,0.74,1.23,0.08,0.02,1.80,0.93,25.74,2.69,0.28,0.06,0.10 Tundra_Nenets,3.14,1.61,2.01,20.70,0.11,0.26,0.00,0.02,2.88,1.67,62.83,4.38,0.28,0.05,0.05 #K12b, Reich Bashkir_Central,8.96,18.31,0.37,0.95,11.03,38.13,1.49,0.10,1.45,9.60,9.47,0.14 Bashkir_North,8.37,17.54,0.22,0.68,11.69,41.61,1.94,0.04,0.52,7.50,9.66,0.24 Bashkir_South,11.08,24.18,0.34,1.20,7.50,29.53,1.81,0.12,0.47,15.74,7.88,0.15 Russian_Archangelsk_Krasnoborsky,4.77,7.42,0.26,0.28,18.80,59.08,0.69,0.00,0.55,1.61,6.55,0.00 Russian_Archangelsk_Leshukonsky,5.06,12.41,0.28,0.80,12.13,59.84,0.99,0.41,1.25,1.40,5.40,0.03 Russian_Archangelsk_Pinezhsky,4.02,9.51,0.46,0.73,15.45,62.86,1.25,0.28,0.33,0.58,4.31,0.23 Russian_Belgorod,2.61,1.68,0.10,0.43,21.58,57.10,0.62,0.00,1.68,0.48,13.67,0.04 Russian_Kaluga,1.82,2.15,0.10,0.33,19.05,59.85,1.10,0.00,1.79,0.04,13.76,0.01 Russian_Kursk,3.38,1.62,0.00,0.28,19.58,58.39,1.23,0.07,1.76,0.42,13.12,0.16 Russian_Orel,3.71,2.13,0.46,0.22,19.40,56.10,1.50,0.32,1.10,0.63,14.28,0.14 Russian_Pskov,2.84,2.01,0.24,0.35,20.43,62.64,0.79,0.04,1.38,0.01,8.98,0.29 Russian_Ryazan,4.57,3.49,0.32,0.08,20.52,56.73,0.88,0.13,0.81,0.32,12.06,0.07 Russian_Smolensk,4.45,1.33,0.43,0.62,21.93,57.20,0.74,0.13,1.49,0.00,11.57,0.12 Russian_Tver,3.93,3.69,1.18,0.42,19.36,57.31,0.38,0.18,1.71,0.46,11.11,0.28 Russian_Vologda,3.04,7.38,0.17,0.43,14.03,63.23,0.95,0.04,1.39,0.75,8.59,0.00 Russian_Yaroslavl,3.41,4.09,0.85,0.00,19.94,59.97,0.69,0.16,0.62,0.70,9.56,0.00 Aleut,5.69,19.08,0.07,1.31,10.15,44.66,1.68,0.13,0.16,12.75,4.31,0.00 Enets,3.16,66.82,0.00,0.00,0.95,17.61,0.15,0.00,0.00,11.30,0.00,0.02 Itelmen,2.56,55.40,0.00,1.45,0.00,6.50,1.21,0.00,0.00,32.81,0.00,0.08 Kalmyk,4.20,33.75,0.04,3.95,1.74,7.66,0.85,0.10,0.36,44.01,3.34,0.01 Karelian,3.23,7.38,0.24,0.47,19.10,63.44,0.97,0.06,0.77,0.82,3.50,0.03 Kusunda,9.46,5.84,0.41,14.25,0.24,1.14,26.66,0.30,0.02,41.46,0.16,0.06 Mansi,7.44,42.79,0.00,0.61,2.73,34.80,1.82,0.01,0.00,8.99,0.81,0.00 Nasioi,3.46,4.82,0.60,34.24,1.67,2.01,36.86,3.54,0.50,8.71,0.00,3.59 Newar,16.23,4.65,0.09,10.98,0.85,3.53,30.33,0.03,0.25,31.70,1.34,0.00 Nganasan,0.12,89.74,0.06,0.48,0.02,1.15,0.15,0.08,0.02,8.04,0.00,0.14 Nogai_Astrakhan,7.16,23.65,0.43,2.80,8.10,17.77,1.16,0.02,1.95,27.43,9.50,0.04 Nogai_Karachay_Cherkessia,13.08,10.90,0.23,1.14,3.84,20.54,0.51,0.16,0.71,12.88,35.94,0.07 Nogai_Stavropol,10.77,20.06,0.17,2.25,7.03,17.51,2.11,0.03,1.67,24.76,13.64,0.00 Tatar_Mishar,7.19,10.06,0.01,0.88,16.61,46.04,1.67,0.00,1.32,5.20,10.99,0.03 Tatar_Siberian,9.41,26.59,0.25,1.56,6.42,27.29,1.96,0.07,0.81,17.87,7.77,0.00 Tatar_Siberian_Zabolotniye,10.85,36.40,0.00,1.12,2.99,31.94,1.47,0.24,0.00,12.92,2.01,0.03 Thai,3.50,1.39,0.07,57.25,0.68,0.73,12.36,0.15,0.44,22.16,1.19,0.10 Tharu,15.85,4.64,0.19,10.28,0.34,2.39,31.17,0.00,0.12,34.61,0.41,0.00 Tlingit,7.36,27.62,0.00,1.82,4.48,35.86,1.58,0.00,0.00,19.27,2.00,0.00 Todzin,2.58,61.22,0.00,0.84,0.45,6.84,1.76,0.00,0.32,25.99,0.00,0.00 Tofalar,2.33,64.08,0.00,0.48,0.07,5.86,0.83,0.13,0.59,25.55,0.07,0.00 Ulchi,0.05,43.22,0.03,1.24,0.02,0.13,0.44,0.06,0.00,54.67,0.04,0.10 Veps,2.70,9.19,0.44,0.30,16.67,63.10,1.00,0.12,1.22,1.19,4.05,0.04 Yukagir_Forest,2.01,35.39,0.15,1.02,9.92,31.55,1.50,0.12,0.81,11.97,5.45,0.11 Yukagir_Tundra,0.58,68.94,0.04,0.29,0.02,3.27,0.68,0.05,0.00,26.08,0.00,0.04 #K12b, Cardona 2014 Altaian_Teleut,8.43,33.04,0.12,2.22,3.22,17.99,1.45,0.02,0.09,30.88,2.31,0.24 Forest_Nenets,4.21,65.37,0.00,0.03,0.05,19.27,0.84,0.01,0.00,10.18,0.01,0.03 Komi_Siberian,6.11,27.21,0.13,0.05,10.35,46.18,1.16,0.13,0.32,4.61,3.72,0.03 Tundra_Nenets,4.06,62.07,0.03,0.18,1.15,20.52,0.88,0.07,0.06,10.29,0.60,0.08

Quote:

Originally Posted by Leto

Hey Komin, what is Komi_Siberia? Another mixed group?

Target: Komi_Siberian
Distance: 0.3028% / 0.30276589 | R3P
51.6 Khanty
37.3 North_Russian
11.1 Russian_Oryol

Looks like a biracial Khanty-Russian mix :D The two principal Komi subgroups, the Zyryans and the Permyaks all live west of the Urals.

They're Komis whose location is listed as "Northwestern Siberia", which probably means Yamalo-Nenets Autonomous Okrug, or maybe Khanty-Mansi AO. They're from Cardona et al. 2014, "Genome-Wide Analysis of Cold Adaptation in Indigenous Siberian Populations": https://www.ncbi.nlm.nih.gov/geo/que...i?acc=GSE73996.

Some Komis from Yamal are mixed with Khanty or Nenetses:

Spoiler!

https://i.ibb.co/jJn5TdH/RY-2702-06m.jpg
"RY.2702-06: Marina Valeeva (right) a young Komi woman together with her mother, Marina Zatrueva, who is Khanty. inside her family's tent at a winter camp in the forest. Priuralsky District, Yamal, NW Siberia."
https://www.arcticphoto.com/supergal.../ry2702-06.htm

https://i.ibb.co/HYnbN3z/RY-2703-18m.jpg
https://www.arcticphoto.com/supergal.../ry2703-18.htm
"Two Komi sisters, Ksusha (left) and Albina Valeeva, wearing traditional reindeer skin clothing. Priuralsky District of the Yamal. NW Siberia, Russia"

In K13, 1 sample has Vepsian-level Siberian admixture, 7 are in the range of regular Komis, 3 samples are in the Mari range, 3 are in the range of Khanty and Mansi, and 1 has Nenets-level Siberian admixture:

North_Atlantic Baltic West_Med West_Asian East_Med Red_Sea South_Asian East_Asian Siberian Amerindian Oceanian Northeast_African Sub-Saharan

Komi_Siberian:GRC11049695 25.75 44.18 6.35 6.97 3.26 0.00 1.98 0.00 9.92 0.73 0.81 0.00 0.05

Komi_Siberian:GRC11049693 25.51 43.13 5.93 5.64 0.00 0.42 2.47 0.00 13.24 2.75 0.68 0.23 0.00

Komi_Siberian:GRC11049700 28.28 42.20 2.17 4.19 0.00 1.12 1.49 2.58 13.65 3.11 0.29 0.00 0.93

Komi_Siberian:GRC11049698 19.50 47.62 4.52 8.29 0.17 0.00 1.87 1.05 14.12 2.87 0.00 0.00 0.00

Komi_Siberian:GRC11049692 21.94 47.89 5.63 4.00 0.00 0.94 3.06 0.00 14.39 0.93 1.21 0.00 0.00

Komi_Siberian:GRC10045017 20.67 48.96 0.00 9.87 0.51 0.18 1.19 0.00 14.65 2.97 0.00 0.00 1.00

Komi_Siberian:GRC11049699 24.78 46.00 0.31 8.10 0.00 0.59 2.74 0.00 14.84 2.48 0.00 0.09 0.07

Komi_Siberian:GRC11049694 24.45 47.43 2.25 3.55 0.00 0.00 2.03 0.75 15.40 2.99 0.60 0.00 0.56

Komi_Siberian:GRC11049691 14.03 42.87 4.41 4.42 1.30 0.05 1.80 0.00 28.47 2.64 0.00 0.00 0.00

Komi_Siberian:GRC11049689 16.09 39.35 0.00 5.85 0.00 1.23 1.67 3.01 29.93 2.87 0.00 0.00 0.00

Komi_Siberian:GRC11049690 15.51 42.07 0.00 6.45 0.00 0.00 0.32 1.20 31.00 0.99 1.02 1.44 0.00

Komi_Siberian:GRC11049696 9.01 34.43 0.00 4.33 0.00 0.00 3.15 1.02 42.26 5.73 0.07 0.00 0.00

Komi_Siberian:GRC11052239 6.95 29.83 0.00 3.00 0.00 0.00 2.65 4.18 47.76 5.54 0.00 0.00 0.10

Komi_Siberian:GRC11049697 5.22 29.25 0.00 5.22 0.00 0.00 4.87 1.60 48.58 3.96 1.08 0.23 0.00

Komi_Siberian:GRC11052238 0.00 18.84 0.00 1.45 0.00 0.00 3.10 0.10 72.67 3.83 0.00 0.00 0.00

Kolvin Nenetses are komified Nenetses who call themselves Komi, who speak Komi, and who wear Komi clothes, so it's not clear if they should be counted as a subgroup of Komi or Nenets, but they mostly live on the European side of the Urals, so I don't think these samples are Kolvin.

10-26-2021, 02:02 PM
Leto

Thanks for clarifying that, Komin!

Can you merge Kursk, Belgorod and Oryol into one new Russian_Southwest average? Would be better than the old Davidski shit, at least here we know the sample size. I will probably consider adding some of those Russians to the updated K13 spreadsheet.

EDIT: wait, I can do it myself :)

Show 40 post(s) from this thread on one page

Tolerance	Average difference in admixture percentages compared to previous tolerance	Running time per sample
1e-1	-	1.22
1e-2	3.144810	1.65
1e-3	3.515349	3.12
1e-4	0.316737	3.47
1e-5	0.002387	3.64
1e-6	0.000097	3.51
1e-7	0.000062	3.65
1e-8	0.000088	3.65

	North_Atlantic	Baltic	West_Med	West_Asian	East_Med	Red_Sea	South_Asian	East_Asian	Siberian	Amerindian	Oceanian	Northeast_African	Sub-Saharan
Komi_Siberian:GRC11049695	25.75	44.18	6.35	6.97	3.26	0.00	1.98	0.00	9.92	0.73	0.81	0.00	0.05
Komi_Siberian:GRC11049693	25.51	43.13	5.93	5.64	0.00	0.42	2.47	0.00	13.24	2.75	0.68	0.23	0.00
Komi_Siberian:GRC11049700	28.28	42.20	2.17	4.19	0.00	1.12	1.49	2.58	13.65	3.11	0.29	0.00	0.93
Komi_Siberian:GRC11049698	19.50	47.62	4.52	8.29	0.17	0.00	1.87	1.05	14.12	2.87	0.00	0.00	0.00
Komi_Siberian:GRC11049692	21.94	47.89	5.63	4.00	0.00	0.94	3.06	0.00	14.39	0.93	1.21	0.00	0.00
Komi_Siberian:GRC10045017	20.67	48.96	0.00	9.87	0.51	0.18	1.19	0.00	14.65	2.97	0.00	0.00	1.00
Komi_Siberian:GRC11049699	24.78	46.00	0.31	8.10	0.00	0.59	2.74	0.00	14.84	2.48	0.00	0.09	0.07
Komi_Siberian:GRC11049694	24.45	47.43	2.25	3.55	0.00	0.00	2.03	0.75	15.40	2.99	0.60	0.00	0.56
Komi_Siberian:GRC11049691	14.03	42.87	4.41	4.42	1.30	0.05	1.80	0.00	28.47	2.64	0.00	0.00	0.00
Komi_Siberian:GRC11049689	16.09	39.35	0.00	5.85	0.00	1.23	1.67	3.01	29.93	2.87	0.00	0.00	0.00
Komi_Siberian:GRC11049690	15.51	42.07	0.00	6.45	0.00	0.00	0.32	1.20	31.00	0.99	1.02	1.44	0.00
Komi_Siberian:GRC11049696	9.01	34.43	0.00	4.33	0.00	0.00	3.15	1.02	42.26	5.73	0.07	0.00	0.00
Komi_Siberian:GRC11052239	6.95	29.83	0.00	3.00	0.00	0.00	2.65	4.18	47.76	5.54	0.00	0.00	0.10
Komi_Siberian:GRC11049697	5.22	29.25	0.00	5.22	0.00	0.00	4.87	1.60	48.58	3.96	1.08	0.23	0.00
Komi_Siberian:GRC11052238	0.00	18.84	0.00	1.45	0.00	0.00	3.10	0.10	72.67	3.83	0.00	0.00	0.00