Gedmatch calculators on Vahaduo

erased by haste :)

deleted due to not checking the samples :rolleyes:

Deleted because my Alzheilmer affected me in a bad way.:p

I order you to forget everything !!!

Quote:

Originally Posted by gixajo

If someone needs any other avalaible average of individual samples from that site, ask for them, whether or not they are already included or will be included in the "vahaduo for Gedmatch" sources, even if only to test them individually or make a specific model.

Some are available in K13 format in the David Reich datasheet, others could be not, or some individual samples could be missing, but are probably more "academic" than many other "private" averages included in vahaduo for Gedmatch.

None of that shite will be added because all that data was used as original references for Gedmatch back in 2012-13. Besides, it's severely calculator-affected. Look at that Utah White average. 59% North Atlantic? You gotta be kidding, old man.

Quote:

Originally Posted by gixajo

From here: https://www.internationalgenome.org/...population/IBS

IBS (Iberian Population in Spain), average:

Code:

IBS:Average_n=107,42.93,7.90,30.95,1.80,10.03,2.52,0.73,0.39,0.30,0.39,0.36,1.04,0.65

Made with these 107 individual samples.

Spoiler!

Code:

IBS.SG:HG01500.SG,44.36,0.00,37.07,7.73,1.24,4.97,0.79,0.00,0.59,0.00,0.00,2.85,0.41 IBS.SG:HG01501.SG,42.86,10.17,27.51,0.00,7.50,5.53,0.00,2.07,0.00,0.18,0.00,4.13,0.05 IBS.SG:HG01503.SG,36.78,13.03,30.84,5.64,6.70,3.17,0.00,0.00,0.43,0.69,0.00,2.71,0.00 IBS.SG:HG01504.SG,47.47,5.35,25.85,0.75,12.13,6.19,0.00,1.29,0.35,0.00,0.54,0.08,0.00 IBS.SG:HG01506.SG,53.92,2.49,26.57,1.57,9.14,2.71,0.58,0.11,0.00,0.13,1.10,0.00,1.68 IBS.SG:HG01507.SG,43.14,10.53,25.38,0.00,16.28,0.00,0.00,0.85,0.00,0.00,0.20,2.84,0.79 IBS.SG:HG01509.SG,39.54,12.42,23.98,1.74,13.26,4.89,0.00,0.00,0.00,1.17,0.00,2.33,0.66 IBS.SG:HG01510.SG,37.34,12.01,30.26,2.65,13.49,2.84,0.00,0.00,0.00,0.00,0.00,0.00,1.41 IBS.SG:HG01512.SG,45.33,9.45,26.29,3.55,8.99,3.37,0.00,0.00,0.49,1.15,1.38,0.00,0.00 IBS.SG:HG01513.SG,55.37,1.02,32.96,0.00,4.53,0.18,3.10,0.00,0.29,0.00,1.18,1.37,0.00 IBS.SG:HG01515.SG,59.46,0.09,34.08,0.00,2.26,1.34,0.00,0.00,1.98,0.77,0.00,0.00,0.00 IBS.SG:HG01516.SG,59.04,0.00,38.14,0.00,0.00,1.33,0.00,0.00,0.00,0.86,0.00,0.20,0.43 IBS.SG:HG01518.SG,62.63,0.00,34.19,0.00,1.69,0.00,0.00,0.00,0.00,0.00,0.00,1.05,0.44 IBS.SG:HG01519.SG,53.52,3.38,42.81,0.00,0.00,0.00,0.00,0.00,0.00,0.22,0.07,0.00,0.00 IBS.SG:HG01521.SG,59.12,0.00,38.60,0.00,0.00,0.29,0.68,0.00,0.00,0.00,0.76,0.00,0.54 IBS.SG:HG01522.SG,55.00,5.41,35.59,0.00,0.00,0.48,0.00,2.13,0.33,0.00,1.07,0.00,0.00 IBS.SG:HG01524.SG,36.12,7.90,37.60,0.00,10.60,4.59,0.00,0.56,0.00,0.00,0.46,2.17,0.00 IBS.SG:HG01525.SG,43.41,0.64,39.09,0.00,4.30,4.29,2.64,1.26,0.54,0.10,0.45,1.82,1.47 IBS.SG:HG01527.SG,39.92,7.20,27.93,3.75,12.23,3.40,1.70,0.00,0.00,1.10,0.11,0.58,2.06 IBS.SG:HG01528.SG,43.44,8.38,30.12,0.00,12.22,2.43,0.00,0.34,0.00,1.25,0.00,1.83,0.00 IBS.SG:HG01530.SG,35.91,9.80,39.31,1.47,2.19,5.11,2.39,0.00,2.00,0.00,0.12,1.08,0.63 IBS.SG:HG01531.SG,34.20,13.82,34.16,1.87,8.13,3.83,1.41,0.00,0.00,0.01,0.00,1.11,1.46 IBS.SG:HG01536.SG,50.49,7.72,33.81,1.24,1.68,0.00,0.00,0.00,0.00,1.38,0.00,3.46,0.23 IBS.SG:HG01537.SG,36.49,15.00,25.80,3.63,14.03,2.23,0.00,0.00,0.00,1.00,0.30,1.51,0.00 IBS.SG:HG01602.SG,41.55,8.51,31.56,0.00,8.85,4.60,0.00,0.00,0.00,0.94,1.49,2.49,0.00 IBS.SG:HG01603.SG,41.87,10.10,34.51,0.00,6.41,2.71,0.89,0.18,0.00,0.00,0.56,0.00,2.79 IBS.SG:HG01605.SG,44.20,4.59,26.70,2.40,16.53,1.01,0.22,0.92,0.00,2.49,0.39,0.00,0.56 IBS.SG:HG01606.SG,51.57,3.16,30.17,0.00,10.31,3.80,0.81,0.00,0.00,0.00,0.00,0.00,0.18 IBS.SG:HG01607.SG,39.46,11.62,26.58,2.94,13.98,1.01,2.13,0.00,0.00,0.05,1.25,0.97,0.00 IBS.SG:HG01608.SG,39.22,6.33,39.88,1.68,8.34,0.93,0.00,0.00,0.00,0.00,0.00,1.27,2.36 IBS.SG:HG01610.SG,50.98,0.00,32.30,0.00,8.75,5.14,0.00,0.00,0.50,0.43,0.37,0.00,1.54 IBS.SG:HG01612.SG,42.58,6.58,27.80,4.18,10.45,4.04,0.00,1.27,0.15,0.00,0.01,0.00,2.94 IBS.SG:HG01613.SG,36.97,10.34,35.60,8.82,3.54,1.78,0.00,1.41,0.40,0.00,0.00,0.00,1.14 IBS.SG:HG01615.SG,34.89,12.88,30.12,0.00,20.49,0.00,0.00,0.00,0.00,0.00,0.00,1.61,0.00 IBS.SG:HG01617.SG,37.71,3.01,37.44,3.68,10.84,3.08,0.00,2.41,0.51,0.18,0.00,0.00,1.13 IBS.SG:HG01618.SG,39.90,8.40,25.98,2.55,13.69,3.83,0.00,1.87,0.17,1.78,0.06,0.23,1.54 IBS.SG:HG01619.SG,36.32,9.71,27.69,6.77,13.89,2.58,1.50,0.22,0.00,0.08,1.25,0.00,0.00 IBS.SG:HG01620.SG,37.49,9.13,24.96,6.01,16.53,1.05,0.00,1.18,0.00,0.00,0.34,3.06,0.26 IBS.SG:HG01623.SG,44.40,0.76,36.14,0.00,11.63,0.66,0.00,1.69,0.00,1.42,1.01,2.29,0.00 IBS.SG:HG01624.SG,34.29,7.91,30.23,2.02,18.45,1.03,0.00,0.00,2.72,0.47,0.43,2.45,0.00 IBS.SG:HG01625.SG,40.00,10.92,33.69,3.27,4.06,5.37,0.00,0.00,1.13,0.99,0.00,0.00,0.56 IBS.SG:HG01626.SG,42.98,0.00,24.44,9.16,17.07,3.74,0.00,0.00,0.94,0.92,0.00,0.53,0.23 IBS.SG:HG01631.SG,43.60,5.15,30.29,0.00,19.59,0.00,0.00,0.13,0.68,0.00,0.00,0.00,0.55 IBS.SG:HG01632.SG,23.27,19.59,33.33,0.00,16.83,4.92,0.00,0.26,0.00,0.00,0.00,1.80,0.00 IBS.SG:HG01668.SG,46.49,7.44,25.97,2.52,7.27,4.55,2.11,0.20,0.00,0.00,0.20,0.71,2.53 IBS.SG:HG01669.SG,30.92,9.56,35.92,2.43,11.60,1.57,0.00,0.00,1.17,0.00,2.29,1.14,3.40 IBS.SG:HG01670.SG,48.95,2.66,25.36,0.00,19.53,0.00,0.00,1.29,0.00,0.00,1.28,0.39,0.53 IBS.SG:HG01672.SG,37.06,11.51,33.53,0.00,10.41,3.08,2.58,0.00,0.00,0.41,0.00,0.89,0.53 IBS.SG:HG01673.SG,47.09,2.84,37.63,6.92,0.00,0.21,1.98,0.31,0.55,0.00,1.05,1.34,0.07 IBS.SG:HG01675.SG,43.43,7.72,30.16,0.00,11.98,2.56,3.25,0.00,0.16,0.32,0.00,0.00,0.42 IBS.SG:HG01676.SG,40.61,8.73,31.21,0.00,16.22,0.66,0.00,0.00,0.44,0.86,0.75,0.53,0.00 IBS.SG:HG01678.SG,41.34,9.19,31.82,0.00,13.12,0.40,3.33,0.00,0.00,0.00,0.00,0.80,0.00 IBS.SG:HG01679.SG,45.04,11.14,26.99,1.20,12.22,0.98,0.00,0.00,0.02,0.00,0.59,1.83,0.00 IBS.SG:HG01680.SG,36.54,13.12,29.51,1.49,16.88,0.62,0.00,0.00,0.00,1.04,0.00,0.00,0.79 IBS.SG:HG01682.SG,49.52,5.76,32.92,0.00,9.71,0.00,0.00,0.00,0.36,0.00,0.16,1.58,0.00 IBS.SG:HG01684.SG,40.79,10.20,30.05,1.35,12.85,3.12,0.00,0.00,0.00,0.65,0.99,0.00,0.00 IBS.SG:HG01685.SG,37.44,13.12,34.16,2.26,5.51,4.18,0.00,0.00,0.00,0.00,0.51,2.81,0.00 IBS.SG:HG01686.SG,44.90,16.73,23.19,0.00,5.28,5.48,0.96,0.06,0.45,0.00,0.00,2.97,0.00 IBS.SG:HG01694.SG,41.91,2.26,31.86,2.01,13.55,0.00,2.17,0.00,0.00,0.70,0.86,4.59,0.11 IBS.SG:HG01695.SG,39.49,0.00,37.09,5.35,2.37,7.22,2.80,0.99,0.00,0.00,1.44,3.25,0.00 IBS.SG:HG01694,40.97,2.98,32.38,1.79,15.00,0.00,0.36,0.30,0.00,0.21,0.79,4.72,0.52 IBS.SG:HG01695,41.26,0.21,34.32,2.70,7.73,6.02,1.29,0.00,0.34,0.10,0.95,4.98,0.08 IBS.SG:HG01697.SG,42.42,6.44,28.09,1.35,11.06,4.10,0.80,0.00,0.00,1.98,0.00,3.77,0.00 IBS.SG:HG01699.SG,30.96,13.61,30.31,0.00,17.24,3.93,0.00,2.83,0.00,0.00,0.00,0.00,1.11 IBS.SG:HG01700.SG,53.03,0.00,45.91,0.00,0.00,0.00,0.56,0.00,0.00,0.49,0.00,0.00,0.00 IBS.SG:HG01702.SG,54.81,0.00,43.74,0.33,0.00,0.66,0.00,0.46,0.00,0.00,0.00,0.00,0.00 IBS.SG:HG01704.SG,35.81,8.63,28.62,1.27,14.90,5.35,1.03,0.29,1.03,1.26,0.00,0.00,1.82 IBS.SG:HG01705.SG,42.04,5.71,31.74,0.89,9.86,5.75,1.38,0.00,1.44,0.00,0.00,0.84,0.36 IBS.SG:HG01707.SG,37.82,13.13,35.99,0.00,8.81,0.00,0.00,0.00,0.00,0.29,0.67,1.84,1.45 IBS.SG:HG01708.SG,43.58,7.99,29.85,1.27,10.09,2.77,0.00,1.46,0.00,0.10,0.00,1.34,1.54 IBS.SG:HG01709.SG,36.59,12.98,33.19,1.71,10.55,1.73,0.00,0.00,0.00,0.00,0.08,0.12,3.04 IBS.SG:HG01710.SG,39.75,11.70,28.13,0.00,14.48,1.91,2.99,0.00,0.00,0.00,0.00,0.00,1.04 IBS.SG:HG01746.SG,53.76,2.49,30.07,0.00,7.85,5.10,0.00,0.00,0.00,0.00,0.35,0.36,0.00 IBS.SG:HG01747.SG,43.03,11.00,25.26,0.03,12.05,4.17,1.91,1.10,0.00,0.52,0.00,0.94,0.00 IBS.SG:HG01756.SG,46.41,7.12,25.27,2.50,10.09,4.07,0.00,1.63,0.74,0.00,0.33,1.85,0.00 IBS.SG:HG01757.SG,38.73,12.23,24.39,1.04,16.28,2.17,1.27,0.63,1.07,0.00,0.66,0.00,1.52 IBS.SG:HG01761.SG,54.46,0.33,28.82,0.00,12.93,1.00,0.05,0.00,0.00,0.09,0.00,0.00,2.31 IBS.SG:HG01762.SG,45.06,12.40,26.82,1.96,8.57,2.23,1.65,0.00,0.72,0.00,0.00,0.00,0.60 IBS.SG:HG01765.SG,42.79,7.29,28.33,3.63,8.63,3.03,3.40,0.19,0.00,1.21,0.00,1.51,0.00 IBS.SG:HG01766.SG,45.44,5.66,23.66,2.84,15.78,2.39,0.00,1.48,0.39,0.00,0.62,1.31,0.42 IBS.SG:HG01767.SG,41.03,5.04,25.91,6.98,14.51,2.27,0.00,0.00,0.00,0.00,2.19,0.43,1.64 IBS.SG:HG01768.SG,36.45,13.63,24.11,2.29,15.81,3.23,0.00,0.66,1.81,0.00,0.24,1.13,0.64 IBS.SG:HG01770.SG,53.78,3.57,35.27,0.59,3.76,0.00,0.00,0.96,0.00,0.14,0.00,0.00,1.94 IBS.SG:HG01771.SG,41.36,11.58,39.82,0.00,2.59,1.71,0.00,0.00,0.35,0.76,0.65,0.55,0.62 IBS.SG:HG01773.SG,56.44,0.00,33.62,0.00,6.52,0.00,1.00,0.04,0.00,0.00,0.00,0.77,1.62 IBS.SG:HG01775.SG,44.98,2.12,40.09,7.89,0.65,3.33,0.00,0.00,0.19,0.00,0.00,0.00,0.75 IBS.SG:HG01776.SG,48.32,5.27,33.23,7.30,0.00,2.65,0.09,0.34,0.65,0.68,1.46,0.00,0.00 IBS.SG:HG01777.SG,49.04,3.62,34.74,0.74,7.08,1.25,1.85,0.83,0.00,0.46,0.39,0.00,0.00 IBS.SG:HG01779.SG,38.68,11.76,38.28,1.98,5.25,2.41,0.99,0.00,0.00,0.00,0.00,0.65,0.00 IBS.SG:HG01781.SG,41.64,12.28,27.93,0.85,12.46,1.29,0.00,0.00,0.09,0.00,1.40,1.37,0.68 IBS.SG:HG01783.SG,40.73,10.10,30.24,0.00,13.64,0.99,1.07,0.00,0.00,0.78,0.00,2.46,0.00 IBS.SG:HG01784.SG,49.68,0.00,31.94,0.00,11.80,3.64,0.00,0.00,2.57,0.00,0.00,0.00,0.38 IBS.SG:HG01785.SG,43.10,18.13,22.65,0.41,14.81,0.69,0.00,0.00,0.00,0.00,0.00,0.00,0.21 IBS.SG:HG01786.SG,45.55,10.67,24.54,4.12,9.39,3.08,1.46,0.00,0.53,0.00,0.04,0.63,0.00 IBS.SG:HG02219.SG,39.57,13.71,22.06,0.00,17.19,4.85,0.00,0.00,2.06,0.56,0.00,0.00,0.00 IBS.SG:HG02220.SG,36.26,16.33,24.42,1.86,15.29,2.06,2.03,1.03,0.28,0.00,0.00,0.00,0.43 IBS.SG:HG02221.SG,42.21,9.54,27.68,0.70,14.11,2.34,0.63,0.00,0.00,0.00,0.70,2.11,0.00 IBS.SG:HG02223.SG,40.40,11.98,28.50,2.66,8.90,2.09,3.60,0.00,0.00,1.16,0.00,0.00,0.70 IBS.SG:HG02224.SG,44.91,9.78,26.47,2.98,8.47,5.37,1.18,0.00,0.00,0.84,0.00,0.00,0.00 IBS.SG:HG02230.SG,40.64,17.19,23.71,1.06,13.48,0.03,1.81,0.56,0.00,0.00,0.73,0.00,0.80 IBS.SG:HG02231.SG,37.96,11.97,31.68,3.42,11.50,0.14,0.00,0.00,0.99,1.85,0.00,0.00,0.50 IBS.SG:HG02232.SG,36.41,9.91,31.54,0.00,15.97,2.14,0.00,2.41,0.00,0.00,0.00,1.61,0.00 IBS.SG:HG02233.SG,33.62,13.58,27.93,3.60,9.77,7.86,0.00,0.00,0.00,1.21,0.00,0.36,2.07 IBS.SG:HG02235.SG,38.79,9.08,34.32,0.00,9.54,1.46,3.61,0.00,0.00,0.00,0.77,2.42,0.00 IBS.SG:HG02236.SG,39.73,12.15,30.79,3.26,8.34,1.19,0.00,1.54,0.00,0.51,0.35,1.07,1.08 IBS.SG:HG02238.SG,40.76,11.28,28.69,1.14,9.53,4.29,0.00,0.00,0.00,2.22,0.00,0.05,2.03 IBS.SG:HG02239.SG,33.23,12.87,22.12,1.08,19.53,4.03,3.71,0.00,0.00,0.29,0.08,1.40,1.65

Is it an average of all Spanish regions, do you think it looks realistic? I'm surprised how big the distance is to Portuguese, I always thought all Iberian regions are pretty close to each other.

Distance to: SpanishNew
2.74018248 Spanish_Aragon
4.17020383 Spanish_Cantabria
4.31310793 Spanish_Castilla_La_Mancha
5.47719819 Spanish
6.08458709 Southwest_French
6.32049049 Spanish_Andalucia
6.97587271 Spanish_Valencia
7.00323497 Spanish_Castilla_Y_Leon
7.41436444 Spanish_Murcia
7.67711534 French_Southwest
7.72556147 Spanish_Cataluna
7.83942600 Spanish_Extremadura
8.18152797 French_South
8.30532961 Spanish_Galicia
9.02669375 Portuguese
12.41855064 French
13.34578211 French_Basque
13.79895286 Italian_Aosta_Valley
14.30990915 Swiss-Italian2
15.06154043 French_Central
15.42581278 Swiss_Italian
16.01910422 French_Provence
16.16424140 Italian_Piedmont
16.65853235 Italian_Lombardy
17.58486565 Italian_Trentino

Quote:

Originally Posted by Dunai

Is it an average of all Spanish regions, do you think it looks realistic? I'm surprised how big the distance is to Portuguese, I always thought all Iberian regions are pretty close to each other.

Distance to: SpanishNew
2.74018248 Spanish_Aragon
4.17020383 Spanish_Cantabria
4.31310793 Spanish_Castilla_La_Mancha
5.47719819 Spanish
6.08458709 Southwest_French
6.32049049 Spanish_Andalucia
6.97587271 Spanish_Valencia
7.00323497 Spanish_Castilla_Y_Leon
7.41436444 Spanish_Murcia
7.67711534 French_Southwest
7.72556147 Spanish_Cataluna
7.83942600 Spanish_Extremadura
8.18152797 French_South
8.30532961 Spanish_Galicia
9.02669375 Portuguese
12.41855064 French
13.34578211 French_Basque
13.79895286 Italian_Aosta_Valley
14.30990915 Swiss-Italian2
15.06154043 French_Central
15.42581278 Swiss_Italian
16.01910422 French_Provence
16.16424140 Italian_Piedmont
16.65853235 Italian_Lombardy
17.58486565 Italian_Trentino

Of course it's not accurate, look at some of the individual scores. As has already been said - calculator effect.

Quote:

Originally Posted by Leto

None of that shite will be added because all that data was used as original references for Gedmatch back in 2012-13. Besides, it's severely calculator-affected. Look at that Utah White average. 59% North Atlantic? You gotta be kidding, old man.

Before insulting you can simply indicate me those samples affected and I gently will remove from the averages.

I was so excited to have so many samples that I started to use them without checking them, thinking that they would already be corrected, so I humbly acknowledge my mistake.

So sorry all.

Quote:

Originally Posted by Dunai

Is it an average of all Spanish regions, do you think it looks realistic? I'm surprised how big the distance is to Portuguese, I always thought all Iberian regions are pretty close to each other.

It´s not reallistic at all, about ten of those samples are wrong as some members have already said.

I didn´t check them before posting, my fault.

Sorry, I am deleting all posts related with this issue.

Quote:

Originally Posted by gixajo

Before insulting you can simply indicate me those samples affected and I gently will remove from the averages.

I was so excited to have so many samples that I started to use them without checking them, thinking that they would already be corrected, so I humbly acknowledge my mistake.

So sorry all.

That wasn't really an insult but I dislike you, particularly for having "Slav" in your profile. You have nothing to do with us, please remove that. Your looks are very non-Slavic, so are the genetics.