No, and I don't see this one going live on Gedmatch. It will absolutely kill the server.Quote:
Originally Posted by Gaita
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No, and I don't see this one going live on Gedmatch. It will absolutely kill the server.Quote:
Originally Posted by Gaita
New Eurogenes 36-population admix calculator:
----------------------------
FINAL ADMIXTURE PROPORTIONS:
----------------------------
0.86% Amerindian
0.00% Arabian
2.34% Armenian
1.91% Basque
0.00% Central_African
2.74% Central_European
0.00% East_African
18.06% East_Asian
4.41% East_Balkan
1.10% East_Central_Asian
1.81% East_Central_Europea
0.00% East_Mediterranean
2.46% Eastern_European
9.84% Finnish
1.83% French
9.93% Iberian
0.00% Indo-Chinese
9.22% Italian
0.04% Malayan
2.77% Mediterranean
0.01% Near_Eastern
0.00% North_African
17.01% North_Atlantic
1.34% North_Caucasian
8.10% North_Sea
0.00% Northeast_African
1.14% Oceanian
0.00% Pygmy
0.02% Siberian
0.00% South_Asian
0.43% South_Central_Asian
1.80% South_Chinese
0.20% Volga-Ural
0.00% West_African
0.35% West_Caucasian
0.26% West_Mediterranean
well, seems i have to redo them :(
Dont have time to run the rest right now, but here is my paternal aunt:
Aunt:
18.72% Finnish
15.64% North_Atlantic
15.04% North_Sea
11.76% Iberian
9.54% French
9.29% Central_European
8.65% East_Central_Europea
5.99% Italian
2.53% Volga-Ural
1.90% Eastern_European
0.57% West_Mediterranean
0.24% East_Balkan
0.07% North_Caucasian
0.05% Basque
0.00% Amerindian
0.00% Arabian
0.00% Armenian
0.00% Central_African
0.00% East_African
0.00% East_Asian
0.00% East_Central_Asian
0.00% East_Mediterranean
0.00% Indo-Chinese
0.00% Malayan
0.00% Mediterranean
0.00% Near_Eastern
0.00% North_African
0.00% Northeast_African
0.00% Oceanian
0.00% Pygmy
0.00% Siberian
0.00% South_Asian
0.00% South_Central_Asian
0.00% South_Chinese
0.00% West_African
0.00% West_Caucasian
Was surprised by the low Iberian, but she does have quite a few Ezyra cousins on 23andme, and since Volga-Ural here replaces the old North Eurasian cluster for Europeans it seems a good fit..
My dad (2 Slovene grandparents, 1 Polish gp, 1 Dutch gp):
14.31% East_Central_Europea
14.13% Finnish
11.49% North_Atlantic
10.50% North_Sea
9.54% Italian
7.62% Central_European
6.81% East_Balkan
6.40% French
6.20% Eastern_European
4.78% Iberian
4.06% West_Caucasian
3.34% East_Mediterranean
0.36% Mediterranean
0.29% North_Caucasian
0.10% Armenian
0.07% South_Central_Asian
0.01% Near_Eastern
Eurogenes K36 Admixture Proportions
0.00% Amerindian
5.47% Arabian
15.74% Armenian
0.00% Basque
0.00% Central_African
0.00% Central_European
0.00% East_African
0.00% East_Asian
0.08% East_Balkan
0.00% East_Central_Asian
0.00% East_Central_Europea
28.08% East_Mediterranean
0.00% Eastern_European
0.00% Finnish
0.00% French
0.00% Iberian
0.00% Indo-Chinese
6.58% Italian
0.00% Malayan
0.00% Mediterranean
21.07% Near_Eastern
0.00% North_African
0.00% North_Atlantic
13.54% North_Caucasian
0.00% North_Sea
0.00% Northeast_African
0.00% Oceanian
0.00% Pygmy
0.00% Siberian
0.00% South_Asian
1.50% South_Central_Asian
0.00% South_Chinese
0.00% Volga-Ural
0.00% West_African
6.34% West_Caucasian
1.60% West_Mediterranean
Here's my new results, put them in size order. Interesting how all my family seem to get more of North Atlantic rather than North Sea in this one, always the other way round in the others. Need some more British results to compare with as well. Also a lot more central European type stuff than I might expect. Seems mainly a British Isles - Central Europe mix:
16.01% North_Atlantic
15.43% North_Sea
12.05% Central_European
10.27% East_Central_Europea
9.35% Iberian
6.74% French
5.72% Finnish
4.76% Eastern_European
3.92% Mediterranean
2.87% Basque
2.01% East_Mediterranean
1.93% West_Caucasian
0.84% East_Balkan
0.78% Volga-Ural
0.52% West_Mediterranean
0.08% South_Central_Asian
0.01% Near_Eastern
All others 0%
Well I'm not going to even start then. What a shame, I would have loved to see my distribution. And yeah it would probably break Gedmatch's servers so I doubt they'll add it.Quote:
Originally Posted by mark
Just leave it running while you do other thing, at least you only have to run it once. :)Quote:
Originally Posted by Loki
Mine are taking about 1 to 1.5 hours, but this is a crappy old PC. Yours might go faster depending on processing power.Quote:
Originally Posted by Loki
18.35% Finnish
18.26% North_Atlantic
16.53% North_Sea
10.79% French
9.29% Central_European
8.42% East_Central_European
6.45% Eastern_European
6.43% Iberian
2.82% Volga-Ural
1.94% East_Balkan
0.38% Basque
0.35% Italian
0.00% Amerindian
0.00% Arabian
0.00% Armenian
0.00% Central_African
0.00% East_African
0.00% East_Asian
0.00% East_Central_Asian
0.00% East_Mediterranean
0.00% Indo-Chinese
0.00% Malayan
0.00% Mediterranean
0.00% Near_Eastern
0.00% North_African
0.00% North_Caucasian
0.00% Northeast_African
0.00% Oceanian
0.00% Pygmy
0.00% Siberian
0.00% South_Asian
0.00% South_Central_Asian
0.00% South_Chinese
0.00% West_African
0.00% West_Caucasian
0.00% West_Mediterranean
Seems that they renamed West and East British to North Atlantic and North Sea.
----------------------------
FINAL ADMIXTURE PROPORTIONS:
----------------------------
0.00% Amerindian
0.00% Arabian
1.41% Armenian
4.75% Basque
0.00% Central_African
5.21% Central_European
0.04% East_African
0.00% East_Asian
0.00% East_Balkan
0.00% East_Central_Asian
6.00% East_Central_Europea
0.00% East_Mediterranean
0.00% Eastern_European
1.75% Finnish
6.44% French
22.64% Iberian
0.00% Indo-Chinese
16.63% Italian
0.00% Malayan
6.94% Mediterranean
2.38% Near_Eastern
5.11% North_African
8.04% North_Atlantic
0.19% North_Caucasian
5.05% North_Sea
0.58% Northeast_African
0.17% Oceanian
0.15% Pygmy
0.00% Siberian
0.00% South_Asian
0.00% South_Central_Asian
0.00% South_Chinese
0.00% Volga-Ural
0.79% West_African
0.05% West_Caucasian
5.67% West_Mediterranean
My Father's results:
16.51% North_Sea
14.68% North_Atlantic
14.54% Iberian
11.83% Central_European
10.96% East_Central_Europea
9.04% Italian
8.33% French
7.73% Finnish
2.07% Eastern_European
1.63% West_Mediterranean
1.56% Volga-Ural
0.70% Basque
0.38% East_Balkan
0.01% East_Mediterranean
All others 0%
My wife (3 North German grandparents, 1 Austrian gp):
13.23% North_Atlantic
12.44% North_Sea
10.63% Finnish
10.28% Iberian
9.89% East_Central_Europea
9.73% Central_European
9.38% Italian
8.66% East_Balkan
5.53% Eastern_European
4.40% Basque
1.83% West_Caucasian
1.58% West_Mediterranean
1.11% North_Caucasian
0.74% French
0.30% Volga-Ural
0.18% South_Asian
0.03% South_Central_Asian
0.03% Amerindian
0.02% Arabian
0.01% Armenian
To compare our scores side-by-side. Where's your Italian? :cool::p
Quote:
Originally Posted by Jackson
Quote:
Originally Posted by Graham
My new results
29.87% Finnish
11.65% North_Atlantic
10.61% North_Sea
10.09% Eastern_European
-------------------------------
8.28% Central_European
6.28% East_Balkan
6.24% East_Central_Europea
-------------------------------
4.77% Iberian
4.66% Italian
2.18% French
1.94% Basque
1.14% Malayan
--------------------------------
0.89% Volga-Ural
0.60% North_Caucasian
0.30% South_Central_Asian
0.19% Oceanian
0.17% East_Central_Asian
0.05% Siberian
0.05% Indo-Chinese
0.02% West_Mediterranean
rest 0%
My grandfather's new
36.40% Finnish
--------------------------------
9.36% North_Sea
8.05% North_Atlantic
7.95% East_Central_Europea
7.19% French
5.57% Central_European
5.27% Volga-Ural
5.02% East_Balkan
--------------------------------
3.96% Eastern_European
3.04% Siberian
2.97% Italian
1.92% Basque
1.89% Iberian
--------------------------------
0.61% Amerindian
0.26% Oceanian
0.19% Malayan
0.16% Pygmy
0.10% West_Mediterranean
0.07% Indo-Chinese
0.02% North_Caucasian
rest 0%
Nice. My Italian is: 6.71% ItalianQuote:
Originally Posted by Graham
You have quite a lot of North Atlantic and Basque, and also higher on the Finnish too, and much lower on the central European stuff. Ultra-Brit :P
Here is my Grandfathers:
16.56% North_Atlantic
16.09% North_Sea
12.46% Iberian
11.91% East_Central_Europea
10.24% Central_European
8.50% Finnish
8.28% Italian
7.55% French
2.73% Eastern_European
2.26% Basque
1.54% East_Balkan
1.04% South_Central_Asian
0.80% Volga-Ural
0.02% Near_Eastern
0.01% West_Mediterranean
0.01% Mediterranean
All others 0%
Damn, item does not exist anymore. Anywhere else I can download it from?Quote:
Originally Posted by evon
https://skydrive.live.com/?cid=5223c...shoKjpmkqRu3twQuote:
Originally Posted by Loki
Quote:
Originally Posted by Polako @ ABF
Cool thanks. Haven't used R in a long time, what are the commands to type in again?
From the readme:Quote:
Originally Posted by Loki
Then the command to start the actual analysis is:Quote:
Once R is running, it will give you a command prompt where you can enter
commands. First, you must change the directory to your working directory.
You can do this from the File -> Change dir menu in Windows, or by using the
setwd command in either Windows or Linux, e.g.:
setwd('/home/johndoe/dodecad')
setwd('c:\\users/johndoe/Dodecad')
Then, enter:
source('standardize.r')
This loads a small program that will convert your data from the
company-specific format to a common format in the next step.
5. At the R prompt, enter:
a. If you have 23andMe data (either v2 or v3 chip):
standardize('johndoe.txt', company='23andMe')
b. if you have Family Finder data (Illumina chip only):
standardize('johndoe.csv', company='ftdna')
This command will write a file called 'genotype.txt' in the working directory;
this contains your genotype in a format understood by DIYDodecad.
Code:system('DIYDodecadWin admix.par')
- Download the necessary files to your DIY directory.Quote:
Originally Posted by Loki
- Start R and change dir on the File Menu to your DIY directory
- Enter source('standardize.r')
- Enter standardize('yourUnziped23andmeRawData.txt', company='23andMe')
- Enter system('DIYDodecadWin admix.par')
- wait for 1h30 :p
----------------------------
FINAL ADMIXTURE PROPORTIONS:
----------------------------
19.79% East_Mediterranean
15.69% Mediterranean
11.11% Italian
8.09% Near_Eastern
7.00% Iberian
5.48% Arabian
5.07% East_Central_Europea
4.14% Central_European
3.99% West_Mediterranean
3.03% West_Caucasian
3.01% East_Balkan
2.64% Armenian
2.22% North_Sea
2.12% North_African
2.09% North_Atlantic
2.05% Basque
1.28% French
0.66% Eastern_European
0.35% Volga-Ural
0.12% Northeast_African
0.06% North_Caucasian
0.00% Amerindian
0.00% Central_African
0.00% East_African
0.00% East_Asian
0.00% East_Central_Asian
0.00% Finnish
0.00% Indo-Chinese
0.00% Malayan
0.00% Oceanian
0.00% Pygmy
0.00% Siberian
0.00% South_Asian
0.00% South_Central_Asian
0.00% South_Chinese
0.00% West_African
It'a very North-West European. European as a whole goes up to 99.67%. Can't wait to test my parents.Quote:
Originally Posted by Jackson
Yeah will be awesome to see how they turn out, and what you get from where.Quote:
Originally Posted by Graham
Here are my Grandmother's results in order. Celtiberian admixture :cool:
I guess she's quite a British Isles mix because they don't all correlate, like more East Euro, Balkan, less Central Euro, much more Iberian and more North Sea, but much lower Basque than yourself, kinda weird mix. :D
Still it's pretty consistent in that most calculators put her slightly south-west of the English average, like 3/4 English 1/4 Cornish, which is consistent enough with her ancestry. I think she is 1/2 Cheshire, 1/4 Hertfordshire 1/4 Devonshire I think. Or 1/2 Cheshire, 1/4 London 1/8 Hertfordshire, 1/8 Devonshire - Can't remember which.
19.15% Iberian
16.93% North_Sea
16.52% North_Atlantic
9.94% French
8.48% East_Central_Europea
8.18% Italian
6.84% Central_European
5.35% Finnish
3.41% Eastern_European
2.50% East_Balkan
1.69% West_Mediterranean
0.88% Volga-Ural
0.07% Basque
0.03% North_Caucasian
All others 0%.
Posted it right after running it, but not in order, so here's mine in order:
28.29% Iberian
13.68% Italian
----------------
8.53% North_Sea
7.69% West_Mediterranean
7.58% North_Atlantic
----------------
6.05% French
5.47% Central_European
4.16% North_African
----------------
3.27% Mediterranean
2.98% East_Balkan
2.26% Arabian
2.25% Finnish
1.86% Basque
1.81% East_Mediterranean
1.62% Volga-Ural
----------------
0.74% Northeast_African
0.70% Near_Eastern
0.50% Central_African
0.39% East_Central_Europea
0.13% Oceanian
0.02% East_African
----------------
0.00% Amerindian
0.00% Armenian
0.00% East_Asian
0.00% East_Central_Asian
0.00% Eastern_European
0.00% Indo-Chinese
0.00% Malayan
0.00% North_Caucasian
0.00% Pygmy
0.00% Siberian
0.00% South_Asian
0.00% South_Central_Asian
0.00% South_Chinese
0.00% West_African
0.00% West_Caucasian
Atlantic Islander, can by Grandmother be an honorary Iberian? :)
I hope some Spanish users will post as well, Gaita, Ibericus please? I need more Iberians to post for comparison.
She's lacking a few key components :PQuote:
Originally Posted by Jackson
Finally mine!! :D
----------------------------
FINAL ADMIXTURE PROPORTIONS:
----------------------------
20.12% Italian
15.03% Iberian
13.10% North_Atlantic
9.17% Finnish
7.99% North_Sea
6.84% Central_European
6.73% Eastern_European
4.81% East_Central_European
4.38% French
1.86% West_Mediterranean
1.72% South_Central_Asian
1.64% North_Caucasian
1.43% West_African
1.43% Basque
1.15% East_Balkan
0.99% Volga-Ural
0.61% Central_African
0.57% Armenian
0.21% East_Mediterranean
0.12% Mediterranean
0.10% Oceanian
0.01% Malayan
0.00% West_Caucasian
0.00% South_Chinese
0.00% South_Asian
0.00% Siberian
0.00% Pygmy
0.00% Northeast_African
0.00% North_African
0.00% Near_Eastern
0.00% Indo-Chinese
0.00% East_Central_Asian
0.00% East_Asian
0.00% East_African
0.00% Arabian
0.00% Amerindian
20% Italian, LOL.
I hope this does go to GEDmatch, and soon. :D I just went from xp to windows 8 and still feel too alienated by it to try to install programs and files like these on it.
Not enough North African. :)Quote:
Originally Posted by Atlantic Islander
Loki do you have Italians in your AF?
Edit: looked for you & nope. Wonder what shared ancestry gave you the high score.
I wonder what is the difference between Italian, Mediterranean, West_Mediterranean and East_Mediterranean.
On another forum they said something about the different Med components being based on different Jewish groups.Quote:
Originally Posted by Loki
And I think they said the Italian component was North Italians and Tuscans.
Mediterranean = Sephardic & Moroccan Jewish.Quote:
Originally Posted by Loki
Italian = Tuscan & North Italian.
West_Med = Sardinian.
East_Med = Lebanese, Druze & Cyprian.
https://docs.google.com/file/d/0B9o3...1HcVhKSXM/edit
"Italian".. which group in Italy is used to measure this? I'd like to see a southerner's results to see if they get inflated East Mediterranean or if it is incorporated into "Italian".
Borat mode: Ah, no Jew. S' nice :thumbsQuote:
Originally Posted by Jockman
I also have no Near Eastern, Arabic or North African.
Thanks for the link.Quote:
Originally Posted by Jockman
The "Italian" component is going to mask some of the other components in Italians and Greeks, and will make it difficult to tell how much of the other components they actually have since North Italians and Tuscans will have affinity to both east and west Meds.