Post your rarest SNPs

New tool at Gedmatch >>> Rare SNP (minor alleles) Utility

Mutation shown in red

RSID Chr Position (B36) Genotype %Occurrence Gene Matching Origins

rs1879471 10 73764671 cT 0.032265 DNAJB12

rs11887773 2 72976920 Ac 0.0643915 United Kingdom

rs3741991 12 112130419 Ag 0.0700894 TPCN1

rs16985540 22 34572433 aG 0.108202 RBM9

rs6902820 6 27333702 cT 0.123683

rs2291384 6 159004273 cT 0.134235 TMEM181 Norway
Poland

rs16902952 5 36373003 Ag 0.136811

rs4404704 5 36381354 Ag 0.155964

rs3825925 15 99262965 aG 0.177088 ALDH1A3

rs8176928 16 3646186 GG 0.18874 DNASE1 Cameroon

rs16862584 2 175038739 cT 0.195787 CIR

rs60549655 10 94824543 cT 0.201578 CYP26A1 Poland

rs2188380 12 109870510 Ct 0.210379

rs6931127 6 27313306 Ag 0.252308

rs3782886 12 110594872 Ct 0.258047 ACAD10 East Asian

rs671 12 110726149 Ag 0.258047 East Asian

rs3093550 6 31658518 Ag 0.262009

rs1945209 11 55935479 Ag 0.262881 OR8U8

rs11573970 1 2485251 GG 0.277855 PANK4

rs4869647 5 36369672 Ag 0.351827 El Salvador
Mexico
New Mexico, USA

rs16870697 4 20886870 aG 0.364199 KCNIP4 East Asian

rs1800574 12 119901247 cT 0.368324 HNF1A Bosnia and Herzegovina
Finland
Ireland

rs12568372 1 162570029 Ct 0.424321 UCK2 Ireland
Mexico

rs1153279 21 29596265 Ct 0.439908 BACH1 Lithuania
New Jersey, USA
Sweden

rs10946947 6 28014209 aG 0.462117

25 SNP matches

http://abload.de/img/a3e5ae_raref3s8j.gif

Code:

<table bordercolor="#808080" bgcolor="white" cellspacing="0" cellpadding="1" border="1"> <tbody><tr><td align="center">RSID</td><td align="center">Chr</td> <td align="center">Position (B36)</td> <td align="center">Genotype</td> <td align="center">%Occurrence</td> <td align="center">Gene</td> <td align="center">Matching Origins</td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs62635777" target="_blank">rs62635777</a></td> <td valign="top" align="center">11</td> <td valign="top" align="right">61474452</td> <td valign="top" align="center">Ct</td> <td valign="top" align="right">0.017696</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'BEST1'" target="_blank">BEST1</a> </td> <td> </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs3097250" target="_blank">rs3097250</a></td> <td valign="top" align="center">19</td> <td valign="top" align="right">58480841</td> <td valign="top" align="center">Ac</td> <td valign="top" align="right">0.0864118</td> <td> </td> <td align="center">Norway </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs35219727" target="_blank">rs35219727</a></td> <td valign="top" align="center">2</td> <td valign="top" align="right">204442294</td> <td valign="top" align="center">Ag</td> <td valign="top" align="right">0.0872448</td> <td> </td> <td> </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs3734707" target="_blank">rs3734707</a></td> <td valign="top" align="center">6</td> <td valign="top" align="right">44330696</td> <td valign="top" align="center">Cg</td> <td valign="top" align="right">0.132493</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'SLC35B2'" target="_blank">SLC35B2</a> </td> <td align="center">East Asian </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs41309132" target="_blank">rs41309132</a></td> <td valign="top" align="center">5</td> <td valign="top" align="right">176769191</td> <td valign="top" align="center">cG</td> <td valign="top" align="right">0.226916</td> <td> </td> <td align="center">United Kingdom </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs1591668" target="_blank">rs1591668</a></td> <td valign="top" align="center">15</td> <td valign="top" align="right">77523537</td> <td valign="top" align="center">gT</td> <td valign="top" align="right">0.256598</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'KIAA1024'" target="_blank">KIAA1024</a> </td> <td> </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs4150412" target="_blank">rs4150412</a></td> <td valign="top" align="center">2</td> <td valign="top" align="right">127764090</td> <td valign="top" align="center">Ag</td> <td valign="top" align="right">0.270601</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'ERCC3'" target="_blank">ERCC3</a> </td> <td align="center">German Jew </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs13053471" target="_blank">rs13053471</a></td> <td valign="top" align="center">22</td> <td valign="top" align="right">49269979</td> <td valign="top" align="center">cT</td> <td valign="top" align="right">0.275289</td> <td> </td> <td align="center">United Kingdom </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs11573970" target="_blank">rs11573970</a></td> <td valign="top" align="center">1</td> <td valign="top" align="right">2485251</td> <td valign="top" align="center">GG</td> <td valign="top" align="right">0.277855</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'PANK4'" target="_blank">PANK4</a> </td> <td> </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs7730228" target="_blank">rs7730228</a></td> <td valign="top" align="center">5</td> <td valign="top" align="right">131094624</td> <td valign="top" align="center">aC</td> <td valign="top" align="right">0.27912</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'FNIP1'" target="_blank">FNIP1</a> </td> <td align="center">Denmark Dominican Republic Finland Poland Sweden United Kingdom </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs34916193" target="_blank">rs34916193</a></td> <td valign="top" align="center">6</td> <td valign="top" align="right">36760107</td> <td valign="top" align="center">Ag</td> <td valign="top" align="right">0.302599</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'CDKN1A'" target="_blank">CDKN1A</a> </td> <td align="center">Caucasus France United Kingdom </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs11195068" target="_blank">rs11195068</a></td> <td valign="top" align="center">10</td> <td valign="top" align="right">112038079</td> <td valign="top" align="center">Ct</td> <td valign="top" align="right">0.328169</td> <td> </td> <td align="center">Southeast Asia </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs2290189" target="_blank">rs2290189</a></td> <td valign="top" align="center">3</td> <td valign="top" align="right">13652947</td> <td valign="top" align="center">TT</td> <td valign="top" align="right">0.357641</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'FBLN2'" target="_blank">FBLN2</a> </td> <td align="center">Finland Mexico Spain United Kingdom </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs16911522" target="_blank">rs16911522</a></td> <td valign="top" align="center">9</td> <td valign="top" align="right">98560944</td> <td valign="top" align="center">Ct</td> <td valign="top" align="right">0.365946</td> <td> </td> <td align="center">Russia Southeast Asia </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs2289650" target="_blank">rs2289650</a></td> <td valign="top" align="center">9</td> <td valign="top" align="right">98577990</td> <td valign="top" align="center">cT</td> <td valign="top" align="right">0.373201</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'ANKS6'" target="_blank">ANKS6</a> </td> <td align="center">Russia Southeast Asia </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs17033405" target="_blank">rs17033405</a></td> <td valign="top" align="center">4</td> <td valign="top" align="right">104180109</td> <td valign="top" align="center">Ct</td> <td valign="top" align="right">0.374552</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'NHEDC1'" target="_blank">NHEDC1</a> </td> <td align="center">Ashkenazi </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs16919509" target="_blank">rs16919509</a></td> <td valign="top" align="center">9</td> <td valign="top" align="right">99179863</td> <td valign="top" align="center">aC</td> <td valign="top" align="right">0.376709</td> <td> </td> <td align="center">Russia United Kingdom </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs12598154" target="_blank">rs12598154</a></td> <td valign="top" align="center">16</td> <td valign="top" align="right">65649980</td> <td valign="top" align="center">cT</td> <td valign="top" align="right">0.38876</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'CBFB'" target="_blank">CBFB</a> </td> <td align="center">Italy New Zealand Poland Southeast Asia United Kingdom </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs6054" target="_blank">rs6054</a></td> <td valign="top" align="center">4</td> <td valign="top" align="right">155709058</td> <td valign="top" align="center">cT</td> <td valign="top" align="right">0.397081</td> <td> </td> <td align="center">France Poland </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs2306093" target="_blank">rs2306093</a></td> <td valign="top" align="center">9</td> <td valign="top" align="right">99173794</td> <td valign="top" align="center">Ag</td> <td valign="top" align="right">0.408383</td> <td> </td> <td align="center">Russia Sweden United Kingdom </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs3803543" target="_blank">rs3803543</a></td> <td valign="top" align="center">15</td> <td valign="top" align="right">77550659</td> <td valign="top" align="center">cT</td> <td valign="top" align="right">0.415318</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'KIAA1024'" target="_blank">KIAA1024</a> </td> <td> </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs16824757" target="_blank">rs16824757</a></td> <td valign="top" align="center">2</td> <td valign="top" align="right">206903319</td> <td valign="top" align="center">Ct</td> <td valign="top" align="right">0.433758</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'GPR1'" target="_blank">GPR1</a> </td> <td align="center">Ashkenazi Lithuania Mexico </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs1153279" target="_blank">rs1153279</a></td> <td valign="top" align="center">21</td> <td valign="top" align="right">29596265</td> <td valign="top" align="center">Ct</td> <td valign="top" align="right">0.439908</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'BACH1'" target="_blank">BACH1</a> </td> <td align="center">Lithuania New Jersey, USA Sweden </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs12554664" target="_blank">rs12554664</a></td> <td valign="top" align="center">9</td> <td valign="top" align="right">95051456</td> <td valign="top" align="center">Ag</td> <td valign="top" align="right">0.441335</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'FANCC'" target="_blank">FANCC</a> </td> <td align="center">Ashkenazi Colombia Finland Guatemala Puerto Rico United Kingdom </td> </tr> <tr> <td valign="top" align="left"><a href="http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=rs17223975" target="_blank">rs17223975</a></td> <td valign="top" align="center">5</td> <td valign="top" align="right">141954254</td> <td valign="top" align="center">cT</td> <td valign="top" align="right">0.445337</td> <td valign="top" align="center"><a href="http://geneticassociationdb.nih.gov/cgi-bin/tableview.cgi?table=allview&cond=upper(GENE) like 'FGF1'" target="_blank">FGF1</a> </td> <td> </td> </tr> </tbody></table>

http://ww2.gedmatch.com:8006/autosom...86b57_rare.gif

http://i1154.photobucket.com/albums/...ps23e86e68.png

http://i1154.photobucket.com/albums/...psfa7a32d9.png

http://i.imgur.com/zgsyfG6.png
http://i.imgur.com/9i5vZAH.png

Top 25 all have the United Kingdom in it..

http://imageshack.us/a/img812/189/matchq.png

http://i1162.photobucket.com/albums/...psa3c9ca4a.png
http://i1162.photobucket.com/albums/...psb86a605a.png

http://i1162.photobucket.com/albums/...psf138f5c7.gif

http://imageshack.us/a/img46/6623/rarey.png
http://imageshack.us/a/img22/5462/rarei.gif

What can one exactly infer about ones results?

Quote:

Originally Posted by acevedoricky

What can one exactly infer about ones results?

I'd also like to know!

Quote:

Originally Posted by acevedoricky

What can one exactly infer about ones results?

Click the description of your genes, if you are lucky there should be a few research about it.. Some causes higher risks of cancer, some opposite etc..

Quote:

Originally Posted by MfA_

Click the description of your genes, if you are lucky there should be a few research about it.. Some causes higher risks of cancer, some opposite etc..

Oh I was looking more for a ancestry angle on it. lol But thanks.

Matching Origins A)
Belgium
Finland
Lithuania

B)
Russia

C)
Finland

D)
Germany
Michigan, USA
United Kingdom

E)
Serbia

F)
East Asian
Southeast Asia

G)
Mexico
Poland
Serbia

H)
Romania
Serbia

I)
Ukraine

J)
Serbia

K)
Denmark

L)
East Asian
Hungary
Serbia

M)
Australia
Germany
Lithuania
New Zealand
Ukraine
United Kingdom

N)
Ecuador
Finland
Serbia

O)
Poland
United Kingdom

P)
Ecuador
Finland

Q)
East Asian
Romania

R)
Ireland
Poland
United Kingdom

wonderful tool. i get plenty of times serbia (and also Romania which is neighbour of my province) and russia (also ukraine and neighbouring countries etc.) that fits my serbian+minor russian ancestry

http://oi42.tinypic.com/2hd2ko0.jpg

Some of it can't be right. It says something about me and the BRCA2 gene, which is to do with breast cancer. However, 23andme clearly states I do not have this gene.

Anyway, it seems so far that I am the rarity winner!!! Unless anybody finds an SNP with less than 0.016276% occurrence ;)

On another note: are any of the genes for anything good? lol

german_jew and ashkenazi occur a few times.

also ukraine (and neighbouring countries). where you are from

RSID	Chr	Position (B36)	Genotype	%Occurrence	Gene	Matching Origins
rs1879471	10	73764671	cT	0.032265	DNAJB12
rs11887773	2	72976920	Ac	0.0643915		United Kingdom
rs3741991	12	112130419	Ag	0.0700894	TPCN1
rs16985540	22	34572433	aG	0.108202	RBM9
rs6902820	6	27333702	cT	0.123683
rs2291384	6	159004273	cT	0.134235	TMEM181	Norway Poland
rs16902952	5	36373003	Ag	0.136811
rs4404704	5	36381354	Ag	0.155964
rs3825925	15	99262965	aG	0.177088	ALDH1A3
rs8176928	16	3646186	GG	0.18874	DNASE1	Cameroon
rs16862584	2	175038739	cT	0.195787	CIR
rs60549655	10	94824543	cT	0.201578	CYP26A1	Poland
rs2188380	12	109870510	Ct	0.210379
rs6931127	6	27313306	Ag	0.252308
rs3782886	12	110594872	Ct	0.258047	ACAD10	East Asian
rs671	12	110726149	Ag	0.258047		East Asian
rs3093550	6	31658518	Ag	0.262009
rs1945209	11	55935479	Ag	0.262881	OR8U8
rs11573970	1	2485251	GG	0.277855	PANK4
rs4869647	5	36369672	Ag	0.351827		El Salvador Mexico New Mexico, USA
rs16870697	4	20886870	aG	0.364199	KCNIP4	East Asian
rs1800574	12	119901247	cT	0.368324	HNF1A	Bosnia and Herzegovina Finland Ireland
rs12568372	1	162570029	Ct	0.424321	UCK2	Ireland Mexico
rs1153279	21	29596265	Ct	0.439908	BACH1	Lithuania New Jersey, USA Sweden
rs10946947	6	28014209	aG	0.462117