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Thread: Nepalese DNA

  1. #51
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    Them having so much NE Asian as opposed to SE Asian isn’t really surprising. Nepalis are located far from any SE Asian population and are instead proximate to NE Asians like Tibetans so it makes sense.

  2. #52
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    Pathak - Kumai Bahun. Matches another Kumai Bahun. Lower Baloch and higher NE-Euro.
    Admix Results (sorted):

    # Population Percent
    1 S-Indian 33.99
    2 Baloch 31.39
    3 NE-Euro 13.75
    4 Caucasian 7.73
    5 NE-Asian 6.02
    6 Siberian 2.53
    7 Beringian 1.85
    8 Mediterranean 1.39
    9 SE-Asian 0.66
    10 Papuan 0.56
    11 SW-Asian 0.12

    Spoiler!


    4-oracles
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  3. #53
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    Shiwakoti- mixed Kumai Bahun with irregular ancestry at great-grandparent level. Baloch is expensed a lil for NE-Asian.
    Admix Results (sorted):

    # Population Percent
    1 S-Indian 34.67
    2 Baloch 30.86
    3 NE-Euro 13.12
    4 NE-Asian 10.66
    5 Caucasian 8.07
    6 Beringian 2.21
    7 Siberian 0.31
    8 SE-Asian 0.11

    Spoiler!

    4-oracles
    Spoiler!


    Upadhyaya- Bahun
    Admix Results (sorted):

    # Population Percent
    1 S-Indian 35.23
    2 Baloch 34.9
    3 NE-Euro 11.58
    4 Caucasian 8.2
    5 Mediterranean 2.45
    6 NE-Asian 2.15
    7 Siberian 2.14
    8 American 1.84
    9 Beringian 0.68
    10 San 0.56
    11 SW-Asian 0.27

    Spoiler!


    4-oracles
    Spoiler!

  4. #54
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    Lohani- Another Kumai Bahun/ Brahmin
    Admix Results (sorted):

    # Population Percent
    1 S-Indian 35.93
    2 Baloch 32.63
    3 NE-Euro 12.32
    4 Caucasian 8.57
    5 NE-Asian 6.74
    6 Siberian 1.07
    7 Beringian 0.87
    8 Mediterranean 0.68
    9 SE-Asian 0.51
    10 American 0.38
    11 San 0.28

    Spoiler!

    4-oracles
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  5. #55
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    These 3 Chhetri harappaworld scores were brought up by a Nepali Moderator from AG site. With them, now I've 9 Chhetri kits with consistent scores. Well, there are more contenders who could be Chhetri as well but not sure about them. Till now, mixed Chhetris including Kit A642452 (Khadka mixed with Newar+Indo-Burmese) and Kit M192608 (resembles Thakuri+Chhetri type score) were taken to compute Chhetri averages. Now, the average Chhetri harappa score (9 kits) stands at:


    S Indian Baloch Caucasian NE Euro SE Asian Siberian NE Asian Papuan American Beringian Mediterranean SW Asian San E African Pygmy W African
    32.93% 26.60% 5.03% 8.17% 1.50% 3.51% 18.69% 0.60% 1.02% 0.73% 0.77% 0.37% 0.03% 0.00% 0.02% 0.01%


    Kit T675670 (deleted)- higher Baloch + Caucasian shifted
    Admix Results (sorted):

    # Population Percent
    1 S-Indian 33.26
    2 Baloch 29.14
    3 NE-Asian 18.62
    4 NE-Euro 7.23
    5 Caucasian 6.4
    6 Siberian 1.86
    7 American 1.71
    8 Papuan 1.22
    9 Beringian 0.57

    Kit M601925 (deleted)-similar to Rawat kit
    Admix Results (sorted):

    # Population Percent
    1 S-Indian 32.75
    2 Baloch 24.8
    3 NE-Asian 21.53
    4 NE-Euro 6.31
    5 Caucasian 3.67
    6 SE-Asian 3.67
    7 Siberian 3.26
    8 American 1.93
    8 Mediterranean 1.31
    9 Beringian 0.53
    10 Papuan 0.22

    Mixed Chhetri probably mixed with Thakuris since it looks almost a photocopy of the Shahi Thakuri kit who's mixed with Chhetris. Well, Chhetris with more than 30% East Asian/Siberian are certainly mixed.

    Kit M192608 (deleted)
    Admix Results (sorted):

    # Population Percent
    1 S-Indian 30.36
    2 Baloch 21.05
    3 NE-Asian 25.57
    4 NE-Euro 6.14
    5 Siberian 5.09
    6 SE-Asian 3.97
    7 Caucasian 3.61
    8 American 1.69
    8 Mediterranean 1.68
    9 Papuan 0.76
    10 Beringian 0.09
    Last edited by Kaazi; 11-10-2020 at 04:49 AM.

  6. #56
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    Pradhan- Shrestha Newar. Looks half Bihari- half Tibetan as expected.
    mtDNA: D4g2a1 Y DNA: O3a3b2

    Admix Results (sorted):

    # Population Percent
    1 NE-Asian 38.11
    2 S-Indian 28.99
    3 Baloch 17.39
    4 Siberian 6.45
    5 NE-Euro 3.65
    6 SE-Asian 1.88
    7 Pygmy 1.27
    8 Papuan 1.11
    9 Caucasian 0.55
    10 American 0.49
    11 SW-Asian 0.11

    Spoiler!


    4-oracles
    Spoiler!

  7. #57
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    Quote Originally Posted by Kaazi View Post
    Kit T675670 (deleted)- higher Baloch + Caucasian shifted
    Admix Results (sorted):

    # Population Percent
    1 S-Indian 33.26
    2 Baloch 29.14
    3 NE-Asian 18.62
    4 NE-Euro 7.23
    5 Caucasian 6.4
    6 Siberian 1.86
    7 American 1.71
    8 Papuan 1.22
    9 Beringian 0.57
    I found that deleted Chhetri kit being uploaded here: Kit T530533
    Admix Results (sorted):

    # Population Percent
    1 S-Indian 33.23
    2 Baloch 29.15
    3 NE-Asian 18.6
    4 NE-Euro 7.25
    5 Caucasian 6.4
    6 Siberian 1.87
    7 American 1.71
    8 Papuan 1.26
    9 Beringian 0.54

    Spoiler!

    4-oracles
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    From the Zack's runs of 3 kits with tag Nepali Brahmin under the head "Nepali", one (HRP0361) looks like mislabeled Chhetri.
    S Indian Baloch Caucasian NE Euro SE Asian Siberian NE Asian Papuan American Beringian Mediterranean SW Asian San E African Pygmy W African

    Chhetri like
    HRP0361 34% 25% 5% 8% 3% 3% 17% 1% 0% 3% 1% 1% 0% 0% 0% 0%

    Bahun like
    HRP0362 34% 31% 9% 10% 0% 3% 4% 1% 1% 2% 2% 2% 0% 0% 0% 0%
    HRP0315 32% 33% 8% 11% 2% 2% 4% 1% 1% 2% 3% 0% 0% 0% 1% 0%

  8. #58
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    Gautam, a kin of the Gautam Bahun (3500+ cM shared).

    This result is interesting. This sample has both the highest Baloch as well as the highest Med in harappaworld among Nepalis so far. The oracle shows it as normal (97% Bahun) but it is wrongly skewed towards higher Baloch and lower Caucasian. The result looks a mix of Bihari Brahmin (due to lower Caucasian) and Punjabi Ramgarhia (due to higher Baloch).

    Admix Results (sorted):

    # Population Percent
    1 Baloch 37.58
    2 S-Indian 33.99
    3 NE-Euro 11.69
    4 Caucasian 4.86
    5 Mediterranean 4.11
    6 Beringian 2.9
    7 NE-Asian 2.49
    8 Siberian 1.75
    9 American 0.47
    10 Papuan 0.14

    Spoiler!


    4-oracles
    Spoiler!


    Distance to: Gautam
    6.37263682 Nepali_Khas_Brahmin
    6.59728732 Bihari_Brahmin
    6.60931161 Nepali
    6.72873688 Rajasthani_Brahmin
    6.92365510 Uttar_Pradesh_Brahmin
    7.06030453 Punjabi_Ramgarhia
    7.11351531 Singapore_Indian_C
    7.58946638 Punjabi_Brahmin
    8.15948528 Kashmiri_Pahari
    8.23148832 Bhumihar_Brahmin
    8.35739792 Punjabi_Tarkhan
    8.39992857 Punjabi
    8.53147115 Uttar_Pradesh_Muslim1
    8.59035506 Jammu&Kashmir_Brahmin
    9.07448070 East_Uttar_Pradesh_Brahmin
    9.25935203 Kashmiri_Pandit
    9.32291800 Brahmin_Uttar_Pradesh
    9.34848116 Punjabi_Jatt_Sikh
    9.78547393 Saraswat_Brahmin
    9.81719919 Himachal_Pradesh_Brahmin
    9.86791265 Pushtikar_Brahmin
    9.91781226 Kashmiri_Butt
    10.02600120 Bengali_Brahmin
    10.04600916 Punjabi_Jatt_Muslim
    10.20747275 Punjabi_Saini

    Distance: 1.9401% / 1.94009116
    Target: Gautam | ADC: 0.25x RC
    53.1 Bihari_Brahmin
    38.3 Punjabi_Ramgarhia
    3.3 Sintashta
    3.1 Koryak
    1.1 Altaian
    1.1 Basque

    Distance: 2.7497% / 2.74967907
    Target: Gautam | ADC: 0.5x RC
    59.3 Bihari_Brahmin
    19.6 Haryana_Jatt
    17.4 Punjabi_Ramgarhia
    3.7 Koryak

    Distance: 4.0055% / 4.00547093
    Target: Gautam | ADC: 1x RC
    34.8 Nepali
    34.4 Bihari_Brahmin
    17.3 Punjabi_Ramgarhia
    13.5 Rajasthani_Brahmin

  9. #59
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    Public Tamang samples
    GenoPlot

    Sample NE-Asian S-Indian Siberian Baloch Papuan Caucasian NE-Euro American SE-Asian San SW-Asian E-African Pygmy Beringian W-African Mediterranean
    Tamang ► Ta64 64.05 12.21 9.97 2.9 2.71 2.56 2.36 1.58 1.24 0.41 0 0 0 0 0 0
    Tamang ► Ta43 62.83 18.89 7.68 4.11 1.26 0 0.42 0 3.56 0 1.25 0 0 0 0 0
    Tamang ► Ta24 62.28 14.9 7.19 5.2 2.96 0 0.3 0.94 4.66 0 0.87 0 0.06 0.57 0.07 0
    Tamang ► Ta05 61.72 19.38 8.03 5.97 1.77 0.25 1.4 0.07 1.24 0 0.17 0 0 0 0 0
    Tamang ► Ta52 60.14 18.51 6.43 5.96 1 0 0 0 4.11 0 0.28 0 0.35 1.84 0 1.39
    Tamang ► Ta80 58.79 18.27 9.39 4.47 2.31 2.67 0.93 0.69 2.47 0 0 0 0 0 0 0
    Tamang ► Ta39 56.41 17.88 7.98 6.19 1.6 1.91 0 1.02 3.33 0 0 0.21 0 3.46 0.01 0
    Tamang outlier ► Ta03 53.18 22.22 4.87 8.88 0.73 1.07 0.79 2.58 5 0 0.33 0.16 0.2 0 0 0

  10. #60
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    Public Tharu samples from Nepal
    GenoPlot

    Sample S-Indian Baloch American Pygmy Caucasian NE-Euro SE-Asian Siberian Papuan Beringian Mediterranean
    Tharu ► D254 67.92 32.08 0.01 0.01 0 0 0 0 0 0 0
    Tharu ► D260 50.93 32.81 1.15 0 3.17 6.25 2.89 0.01 0.37 2.02 0.4

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