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Thread: Could someone build a PCA chart for me to understand how he positioned me genetically?

  1. #1
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    Default Could someone build a PCA chart for me to understand how he positioned me genetically?

    Eurogenes EUtest V2 K15 Oracle results:
    Kit Z981412

    Admix Results (sorted):

    # Population Percent
    1 East_Med 24.62
    2 West_Med 21.21
    3 North_Sea 17.44
    4 West_Asian 15.49
    5 Atlantic 9.13
    6 Baltic 6.32
    7 Red_Sea 3.51
    8 Southeast_Asian 1.37
    9 Eastern_Euro 0.64
    10 Oceanian 0.26

    Single Population Sharing:

    # Population (source) Distance
    1 Greek_Thessaly 8.73
    2 Central_Greek 8.83
    3 East_Sicilian 9.43
    4 Italian_Abruzzo 10.09
    5 South_Italian 10.38
    6 Ashkenazi 11.08
    7 Tuscan 11.65
    8 West_Sicilian 12.21
    9 Greek 12.51
    10 Italian_Jewish 13.78
    11 Algerian_Jewish 15.95
    12 Sephardic_Jewish 16.13
    13 North_Italian 16.41
    14 Bulgarian 16.98
    15 Romanian 18.13
    16 Libyan_Jewish 18.51
    17 Tunisian_Jewish 19.67
    18 Cyprian 20.31
    19 Serbian 20.92
    20 Turkish 22.33

    Mixed Mode Population Sharing:

    # Primary Population (source) Secondary Population (source) Distance
    1 63.3% Greek_Thessaly + 36.7% South_Italian @ 7.76
    2 51.5% Greek_Thessaly + 48.5% Central_Greek @ 7.91
    3 75.5% Greek_Thessaly + 24.5% Italian_Jewish @ 7.92
    4 87.7% Central_Greek + 12.3% West_German @ 7.99
    5 82.7% Greek_Thessaly + 17.3% Libyan_Jewish @ 8
    6 58.9% Greek_Thessaly + 41.1% East_Sicilian @ 8
    7 88.5% Greek_Thessaly + 11.5% Armenian @ 8.04
    8 80.3% South_Italian + 19.7% West_German @ 8.06
    9 91.5% Central_Greek + 8.5% West_Norwegian @ 8.12
    10 86.3% Central_Greek + 13.7% Spanish_Galicia @ 8.15
    11 85.8% Greek_Thessaly + 14.2% Cyprian @ 8.17
    12 91.7% Central_Greek + 8.3% Norwegian @ 8.21
    13 85.5% South_Italian + 14.5% West_Norwegian @ 8.22
    14 88.5% Central_Greek + 11.5% French @ 8.24
    15 90.2% Greek_Thessaly + 9.8% Lebanese_Christian @ 8.25
    16 92% Central_Greek + 8% Orcadian @ 8.25
    17 92% Central_Greek + 8% Swedish @ 8.25
    18 90.2% Greek_Thessaly + 9.8% Assyrian @ 8.26
    19 90.9% Greek_Thessaly + 9.1% Kurdish_Jewish @ 8.27
    20 83.1% Greek_Thessaly + 16.9% Algerian_Jewish @ 8.27



    EUtest Oracle results:
    EUtest Oracle population reference data revised 06 Nov 2012.

    Kit Z981412

    Admix Results (sorted):

    # Population Percent
    1 EAST_MED 27.31
    2 NORTH-CENTRAL_EURO 19.25
    3 WEST_MED 17.23
    4 ATLANTIC 11.36
    5 WEST_ASIAN 10
    6 SOUTH_BALTIC 6.72
    7 MIDDLE_EASTERN 6.05
    8 EAST_EURO 1.09
    9 SOUTH_ASIAN 0.98

    Single Population Sharing:

    # Population (source) Distance
    1 Tuscan 7.94
    2 South_Italian_&_Sicilian 9.87
    3 GR 11.63
    4 AJ 12
    5 North_Italian 13.46
    6 RO 18.25
    7 Serbian 18.9
    8 PT 19.12
    9 ES 21.49
    10 FR 22.49
    11 AT 23.37
    12 TR 24.44
    13 HU 24.7
    14 West_&_Central_German 26.69
    15 NL 27.89
    16 English 28.7
    17 Assyrian 29.07
    18 Cornish 29.23
    19 Armenian 29.28
    20 IQ 30.38

    Mixed Mode Population Sharing:

    # Primary Population (source) Secondary Population (source) Distance
    1 84.9% Tuscan + 15.1% Druze @ 5.82
    2 84.5% Tuscan + 15.5% Assyrian @ 5.97
    3 85.6% Tuscan + 14.4% Mandean @ 6.01
    4 85.8% Tuscan + 14.2% Kurdish @ 6.18
    5 85.8% Tuscan + 14.2% IR @ 6.18
    6 85.9% Tuscan + 14.1% IQ @ 6.26
    7 67.1% Tuscan + 32.9% GR @ 6.34
    8 83.2% Tuscan + 16.8% TR @ 6.35
    9 68.7% Tuscan + 31.3% AJ @ 6.48
    10 86.2% Tuscan + 13.8% Armenian @ 6.49
    11 62.1% Tuscan + 37.9% South_Italian_&_Sicilian @ 6.53
    12 79.1% South_Italian_&_Sicilian + 20.9% English @ 6.54
    13 87.4% Tuscan + 12.6% Samaritan @ 6.58
    14 78.8% South_Italian_&_Sicilian + 21.2% NL @ 6.64
    15 78% South_Italian_&_Sicilian + 22% West_&_Central_German @ 6.64
    16 80.7% South_Italian_&_Sicilian + 19.3% DK @ 6.67
    17 81.5% South_Italian_&_Sicilian + 18.5% South_&_Central_Swedish @ 6.68
    18 81.6% South_Italian_&_Sicilian + 18.4% NO @ 6.72
    19 74.9% GR + 25.1% English @ 6.93
    20 91.3% Tuscan + 8.7% GE @ 7




    puntDNAL K15 Oracle results:
    puntDNAL K15 Oracle

    Kit Z981412

    Admix Results (sorted):

    # Population Percent
    1 Mediterranean 38.47
    2 NE_European 27.56
    3 Caucasian 21.09
    4 SW_Asian 8.92
    5 Horn_Of_Africa 1.76
    6 Omo_River 1.11
    7 E_Asian 0.66
    8 Oceanian 0.43

    Single Population Sharing:

    # Population (source) Distance
    1 Tuscan 3.45
    2 Albanian 4.03
    3 Greek_Central 4.85
    4 Greek_Thessaly 5.2
    5 Ashkenazy_Jew 7.09
    6 Sicilian 8.26
    7 Italian 10.26
    8 Sephardic_Jew 11.06
    9 Montenegrin 11.33
    10 Bulgarian 13
    11 Romanian 13.7
    12 Macedonian 15.07
    13 Brazilian 16.07
    14 Portuguese 16.71
    15 Bosnian 17.5
    16 Spaniard 18.14
    17 Serbian 21.28
    18 Cypriot 23.31
    19 French 23.32
    20 Basque 24.53

    Mixed Mode Population Sharing:

    # Primary Population (source) Secondary Population (source) Distance
    1 88.7% Albanian + 11.3% Druze @ 1.41
    2 88% Albanian + 12% Samaritian @ 1.52
    3 92.4% Tuscan + 7.6% Bedouin_A @ 1.56
    4 92.6% Tuscan + 7.4% Yemenese @ 1.67
    5 87.8% Albanian + 12.2% Palestinian @ 1.68
    6 86.4% Albanian + 13.6% Cypriot @ 1.7
    7 50% Cypriot + 50% French @ 1.7
    8 87.7% Albanian + 12.3% Lebanese @ 1.75
    9 90.7% Tuscan + 9.3% Jordanian @ 1.77
    10 94.7% Tuscan + 5.3% Saudi @ 1.78
    11 88.9% Albanian + 11.1% Jordanian @ 1.79
    12 67.5% Montenegrin + 32.5% Cypriot @ 1.81
    13 88.9% Albanian + 11.1% Iraqi_Jew @ 1.83
    14 90.8% Tuscan + 9.2% Syrian @ 1.84
    15 89% Albanian + 11% Syrian @ 1.86
    16 68.4% Sicilian + 31.6% Bosnian @ 1.87
    17 90.9% Tuscan + 9.1% Iraqi_Jew @ 1.91
    18 89.4% Albanian + 10.6% Assyrian @ 1.91
    19 74.6% Italian + 25.4% Druze @ 1.94
    20 65% Sicilian + 35% Macedonian @ 1.94




    This utility uses the Eurogenes K36 model, created by Davidski (Polako). Questions and comments about this model
    should be directed to him at his Eurogenes Genetic Ancestry Project blog.

    Kit Number: Z981412 Elapsed Time: 11.74 seconds


    Population
    Amerindian -
    Arabian 0.46
    Armenian 4.95
    Basque 1.46
    Central_African -
    Central_Euro 4.45
    East_African -
    East_Asian -
    East_Balkan 8.43
    East_Central_Asian -
    East_Central_Euro -
    East_Med 17.41
    Eastern_Euro -
    Fennoscandian 0.42
    French 1.98
    Iberian 14.07
    Indo-Chinese -
    Italian 17.79
    Malayan -
    Near_Eastern 5.47
    North_African -
    North_Atlantic 2.55
    North_Caucasian 6.52
    North_Sea 4.02
    Northeast_African -
    Oceanian -
    Omotic -
    Pygmy -
    Siberian -
    South_Asian 0.36
    South_Central_Asian -
    South_Chinese -
    Volga-Ural -
    West_African -
    West_Caucasian 2.87
    West_Med 6.76





    Eurogenes K13 Oracle results:
    K13 Oracle ref data revised 21 Nov 2013

    Kit Z981412

    Admix Results (sorted):

    # Population Percent
    1 East_Med 25.35
    2 West_Med 24.73
    3 North_Atlantic 17.28
    4 West_Asian 16.23
    5 Baltic 10.7
    6 Red_Sea 3.68
    7 East_Asian 1.72
    8 Oceanian 0.32

    Single Population Sharing:

    # Population (source) Distance
    1 Central_Greek 4.97
    2 East_Sicilian 6.59
    3 Italian_Abruzzo 6.73
    4 West_Sicilian 7.58
    5 South_Italian 7.68
    6 Greek_Thessaly 7.75
    7 Tuscan 10.93
    8 Ashkenazi 11.56
    9 Algerian_Jewish 14.55
    10 Sephardic_Jewish 14.74
    11 Italian_Jewish 14.93
    12 Bulgarian 15.21
    13 North_Italian 15.79
    14 Romanian 17.25
    15 Tunisian_Jewish 18.74
    16 Libyan_Jewish 19.24
    17 Cyprian 19.58
    18 Turkish 20.97
    19 Serbian 21.46
    20 Lebanese_Muslim 23

    Mixed Mode Population Sharing:

    # Primary Population (source) Secondary Population (source) Distance
    1 90.9% Central_Greek + 9.1% Sardinian @ 3.98
    2 93.4% Central_Greek + 6.6% French_Basque @ 4.09
    3 91.5% Central_Greek + 8.5% Southwest_French @ 4.17
    4 91.6% Central_Greek + 8.4% Spanish_Cantabria @ 4.26
    5 90.5% Central_Greek + 9.5% Spanish_Andalucia @ 4.28
    6 91.5% Central_Greek + 8.5% Spanish_Castilla_La_Mancha @ 4.34
    7 86.4% Central_Greek + 13.6% North_Italian @ 4.35
    8 92.4% Central_Greek + 7.6% Spanish_Aragon @ 4.37
    9 91.5% Central_Greek + 8.5% Spanish_Galicia @ 4.41
    10 91.1% Central_Greek + 8.9% Spanish_Extremadura @ 4.41
    11 91.9% Central_Greek + 8.1% Spanish_Cataluna @ 4.43
    12 91.8% Central_Greek + 8.2% Spanish_Valencia @ 4.43
    13 92.2% Central_Greek + 7.8% Spanish_Castilla_Y_Leon @ 4.46
    14 92.1% Central_Greek + 7.9% Spanish_Murcia @ 4.49
    15 91.8% Central_Greek + 8.2% Portuguese @ 4.49
    16 93.8% Central_Greek + 6.2% French @ 4.61
    17 95.8% Central_Greek + 4.2% Southwest_English @ 4.65
    18 95% Central_Greek + 5% South_Dutch @ 4.67
    19 95.1% Central_Greek + 4.9% East_German @ 4.68
    20 85.5% Central_Greek + 14.5% Tuscan @ 4.68

  2. #2
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    I am not an expert but I can see that we have quite similar results. I am Greek mostly from southern Greece. I suppose that you are from the south of Italy.

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    Senior Member manu15151513's Avatar
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    Quote Originally Posted by xripkan View Post
    I am not an expert but I can see that we have quite similar results. I am Greek mostly from southern Greece. I suppose that you are from the south of Italy.
    My mother comes from central Italy, an area in which it is generally quite similar to the Tuscans, while my father is from the areas south of Rome. I am south-central genetically and I am very close to those of the peloponnese. Southern Italians are more exotic very often from the genetic point of view of the southern Greek Greeks.

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    There is no better K15 PCA than the one ph2ter on anthrogenica makes, besides he has a gazillion individuals there. I dislike that .png one, it's very crude

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    Quote Originally Posted by Vasconcelos View Post
    I dislike that .png one, it's very crude
    You hardly get one that's better weighed for all the components

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    Quote Originally Posted by Vasconcelos View Post
    There is no better K15 PCA than the one ph2ter on anthrogenica makes, besides he has a gazillion individuals there. I dislike that .png one, it's very crude
    Do I just message him to be put on it?

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    Quote Originally Posted by Gründig View Post
    Do I just message him to be put on it?
    Yeah, or post your coordinates in the respective thread

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