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Thread: Gedmatch calculators on Vahaduo

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    Quote Originally Posted by Ion Basescul View Post
    Please update these then. I don't think that anyone has any objections about them.

    Also, do you know what happened to the gradient in the "Distance" tab? Now everything is coloured blue, so it's not working as intended.
    You can change default values for gradient from 0.2 to 25. But I've just changed.
    Last edited by Lucas; 11-23-2020 at 06:51 PM.

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    Luke, can you please finally delete Yemen Jews and Ethiopian Jews from Dodecad K12b? Those are inaccurate legacy references that frequently pop up when they're not needed. That's very annoying. Thank you.

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    K13 Results , converted AncestryDNA kit do 23andme v3 format

    deleted some Slavic populations and Pomak because of overfitting

    Distance: 298.5900% / 2.98590047
    Target: Abriekman | ADC: 0.5x RC
    50.8 Ukrainian_Belgorod
    26.6 Ukrainian_Ivano_Frankivsk
    14.5 Moldova_Centre
    4.6 Adygei
    3.5 Ukrainian_Lviv

    Distance: 262.1985% / 2.62198535
    Target: Abriekman | ADC: 0.25x RC
    45.0 Ukrainian_Belgorod
    18.0 Ukrainian_Ivano_Frankivsk
    15.3 Ukrainian_Lviv
    11.9 Turk_Dobrich
    6.3 Erzya
    3.5 Turk_Meskhetian

    Distance: 235.1753% / 2.35175266
    Target: Abriekman
    68.8 Ukrainian_Belgorod
    17.0 Albanian_central_Albania
    6.1 Erzya
    5.0 Ukrainian_Lviv
    1.4 Moroccan
    0.7 Turk_Meskhetian
    0.6 Dusadh
    0.4 Papuan

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    Quote Originally Posted by Lucas View Post
    You can change default values for gradient from 0.2 to 25. But I've just changed.
    Hi, could you also fix the decimal placement? It's giving large distances.

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    Quote Originally Posted by paradox View Post
    Hi, could you also fix the decimal placement? It's giving large distances.
    Yes. Sorry I updated the core of Vahaduo and forgot about it.

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    OK Lucas, if you don't wish to add the smaller English/Dutch regions (fair enough as they're not really necessary), could you just add/update these, and remove Ulster British/SW English, and that will suffice for these countries.

    K13
    Code:
    English_Midlands,49.62,23.45,13.76,5.66,4.13,0.58,0.96,0.20,0.22,0.47,0.43,0.25,0.21
    English_Southwest,50.26,23.06,14.23,5.30,3.67,0.76,1.13,0.03,0.20,0.54,0.45,0.17,0.13
    Irish,52.54,23.16,12.46,6.75,1.37,0.52,1.32,0.16,0.21,0.85,0.30,0.16,0.13
    Irish_Connacht,52.65,23.42,12.04,7.09,1.07,0.21,1.59,0.10,0.28,0.90,0.21,0.22,0.10
    Irish_Leinster,51.84,23.04,12.80,6.68,1.97,0.62,1.09,0.31,0.09,0.74,0.39,0.19,0.16
    Irish_Munster,52.87,22.83,12.42,6.79,1.52,0.35,1.34,0.19,0.28,0.78,0.23,0.16,0.16
    Irish_Ulster,53.13,22.47,12.65,6.9,0.87,0.61,1.49,0.10,0.36,0.84,0.32,0.05,0.14
    K15
    Code:
    English_Midlands,36.27,27.78,10.09,8.73,9.54,3.87,1.44,0.48,0.57,0.06,0.06,0.26,0.24,0.21,0.15
    English_Southwest,35.79,29.10,9.64,8.78,10.15,3.15,1.13,0.57,0.83,0.01,0.04,0.27,0.27,0.13,0.09
    Irish,36.87,30.46,9.78,8.67,7.52,4.04,0.36,0.34,0.88,0.08,0.09,0.54,0.14,0.08,0.07
    Irish_Connacht,37.58,30.41,9.11,9.30,7.27,3.87,0.07,0.09,1.09,0.04,0.11,0.67,0.13,0.11,0.07
    Irish_Leinster,36.65,30.11,9.58,8.92,7.98,4.19,0.28,0.45,0.76,0.18,0.00,0.41,0.20,0.11,0.11
    Irish_Munster,37.13,30.17,9.77,8.40,7.68,4.48,0.18,0.17,0.91,0.07,0.14,0.50,0.14,0.08,0.10
    Irish_Ulster,36.62,30.93,9.31,8.62,7.70,4.34,0.04,0.30,1.12,0.06,0.13,0.56,0.14,0.03,0.04

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    Quote Originally Posted by Creoda View Post
    OK Lucas, if you don't wish to add the smaller English/Dutch regions (fair enough as they're not really necessary), could you just add/update these, and remove Ulster British/SW English, and that will suffice for these countries.

    K13
    Code:
    English_Midlands,49.62,23.45,13.76,5.66,4.13,0.58,0.96,0.20,0.22,0.47,0.43,0.25,0.21
    English_Southwest,50.26,23.06,14.23,5.30,3.67,0.76,1.13,0.03,0.20,0.54,0.45,0.17,0.13
    Irish,52.54,23.16,12.46,6.75,1.37,0.52,1.32,0.16,0.21,0.85,0.30,0.16,0.13
    Irish_Connacht,52.65,23.42,12.04,7.09,1.07,0.21,1.59,0.10,0.28,0.90,0.21,0.22,0.10
    Irish_Leinster,51.84,23.04,12.80,6.68,1.97,0.62,1.09,0.31,0.09,0.74,0.39,0.19,0.16
    Irish_Munster,52.87,22.83,12.42,6.79,1.52,0.35,1.34,0.19,0.28,0.78,0.23,0.16,0.16
    Irish_Ulster,53.13,22.47,12.65,6.9,0.87,0.61,1.49,0.10,0.36,0.84,0.32,0.05,0.14
    K15
    Code:
    English_Midlands,36.27,27.78,10.09,8.73,9.54,3.87,1.44,0.48,0.57,0.06,0.06,0.26,0.24,0.21,0.15
    English_Southwest,35.79,29.10,9.64,8.78,10.15,3.15,1.13,0.57,0.83,0.01,0.04,0.27,0.27,0.13,0.09
    Irish,36.87,30.46,9.78,8.67,7.52,4.04,0.36,0.34,0.88,0.08,0.09,0.54,0.14,0.08,0.07
    Irish_Connacht,37.58,30.41,9.11,9.30,7.27,3.87,0.07,0.09,1.09,0.04,0.11,0.67,0.13,0.11,0.07
    Irish_Leinster,36.65,30.11,9.58,8.92,7.98,4.19,0.28,0.45,0.76,0.18,0.00,0.41,0.20,0.11,0.11
    Irish_Munster,37.13,30.17,9.77,8.40,7.68,4.48,0.18,0.17,0.91,0.07,0.14,0.50,0.14,0.08,0.10
    Irish_Ulster,36.62,30.93,9.31,8.62,7.70,4.34,0.04,0.30,1.12,0.06,0.13,0.56,0.14,0.03,0.04
    But you also posted averages for North, Central, South Dutch and I added I think it or no?
    K36 Ancestral Report and Chromosomal Analysis / G25 Maps
    https://www.lm-genetics.com

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    Quote Originally Posted by Lucas View Post
    But you also posted averages for North, Central, South Dutch and I added I think it or no?
    Yes you added those, but I also posted averages for smaller regions of the Netherlands/England some pages ago, but honestly they're not necessary, so I'm not bothered.

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    Update for Dodecad K12b

    Code:
    English_North,9.01,0.25,0.27,0.03,38.47,44.34,0.25,0.02,0.65,0.10,6.54,0.02
    English_South,9.09,0.26,0.41,0.14,38.28,43.01,0.24,0.07,0.94,0.04,7.44,0.02
    Irish,10.69,0.23,0.05,0.04,39.30,44.41,0.22,0.02,0.10,0.03,4.84,0.01
    Scottish,10.25,0.19,0.21,0.16,38.53,44.21,0.23,0.01,0.40,0.03,5.73,0
    English_North - 26
    English_South - 35
    Irish - 30
    Scottish - 20

    Distance to: English_North
    1.11897274 English_mixed
    1.70164626 English_South
    1.79117280 Mixed_NW_Euro
    2.49244860 Irish
    2.57522815 Irish
    3.29001520 Dutch
    3.42112555 Dutch_Central
    4.04555311 Dutch_North
    4.48494147 Icelandic
    5.51924814 Dutch_South
    8.09982716 German
    8.16905747 Swedish
    9.58871211 French2
    10.23483757 French
    10.53464760 Bavarian_German
    14.37151349 Slovenian
    15.54159258 Slovak
    16.15114237 Sorb_Lusatia
    16.47149963 Hungarians
    17.83157312 Croat

    Distance to: English_South
    0.67660919 English_mixed
    1.84219977 English_North
    2.36803716 Mixed_NW_Euro
    3.29051668 Dutch
    3.54928162 Irish
    3.63469393 Dutch_Central
    3.69617370 Irish
    4.23837233 Dutch_South
    5.03749938 Dutch_North
    5.87048550 Icelandic
    8.49688767 German
    8.55565895 French2
    9.11246948 Bavarian_German
    9.20701906 French
    9.40572166 Swedish
    13.86794505 Slovenian
    15.59183761 Slovak
    16.20585080 Hungarians
    16.63297628 Sorb_Lusatia
    17.01635568 Italy_Aosta_Valley

    Distance to: Irish
    0.31638584 Irish
    1.81785588 Mixed_NW_Euro
    2.81732142 English_North
    3.19740520 English_mixed
    3.72675462 English_South
    4.69557238 Dutch_North
    4.71578201 Icelandic
    5.42950274 Dutch
    5.54221977 Dutch_Central
    7.73586453 Dutch_South
    8.87980856 Swedish
    9.91194734 German
    10.04644713 French2
    10.71058355 French
    12.66006714 Bavarian_German
    16.67321505 Slovenian
    17.46420911 Slovak
    17.70507554 Sorb_Lusatia
    18.66554580 Hungarians
    19.38065530 PL_Warmia-Masuria

    Distance to: Scottish
    0.85211502 Mixed_NW_Euro
    1.19503138 Irish
    1.33214113 Irish
    1.70076453 English_North
    2.11279436 English_mixed
    2.56304506 English_South
    4.05900234 Dutch_North
    4.22776537 Dutch
    4.38336629 Dutch_Central
    4.41389850 Icelandic
    6.51482156 Dutch_South
    8.48864536 Swedish
    8.89934829 German
    9.85646996 French2
    10.53283912 French
    11.47912018 Bavarian_German
    15.41069758 Slovenian
    16.37447098 Slovak
    16.83302706 Sorb_Lusatia
    17.46734382 Hungarians

    Mixed NW Euro can be removed now IMO, and the duplicate old Irish averages.

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    I don't like the two French references from Dodecad, they are definitely unrepresentative of most French people. Someone should replace them with something more accurate.

    Also what was the sample size for Bavarian_German? 10 or less?

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