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Thread: Viking Age samples GEDmatch results

  1. #21
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    Quote Originally Posted by Token View Post
    Where is the genotype data?
    Not available yet, only BAM and FASTQ files are available.

  2. #22
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    The Viking age lasted approximately from 800 to 1100 AD. Basically after the Norman conquest of Britain they were mostly gone as a phenomenon.

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    Quote Originally Posted by Peterski View Post
    Not available yet, only BAM and FASTQ files are available.
    Not really. Davidski added them to G25 https://drive.google.com/file/d/1Y-e...ew?usp=sharing
    from this dataset https://drive.google.com/file/d/1Sg0...ew?usp=sharing
    although probably it was done in BAK and is quite noisy.

    So far only those

    VK11
    VK14
    VK15
    VK16
    VK17
    VK18
    VK19
    VK20
    VK21
    VK22
    VK164
    VK165
    VK166
    VK168
    VK170
    VK171
    VK172
    VK173
    VK174
    VK175
    VK176
    VK177
    VK178
    VK179
    VK180
    VK182
    VK183
    VK184
    VK185
    VK186
    VK187
    VK189
    VK190
    VK191
    VK193
    VK196
    VK200
    VK201
    VK202
    VK203
    VK204
    VK205
    VK206
    VK207
    VK208
    VK210
    VK211
    VK212
    VK213
    VK214
    VK215
    VK216
    VK217
    VK218
    VK219

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    Results for VK541 (Medieval Lutsk, Ukraine):

    [1] "1. CLOSEST SINGLE ITEM DISTANCE%"
    UA_Zaporizhia-Oblast
    0.5894574
    UA_Volhynia
    0.7805671
    Russia_RUS_Tambov
    0.9203054
    UA_Rivne-Oblast
    0.9251692
    UA_Cherkasy
    0.9893083
    UA_Kiev
    1.0152950
    BY_Grodno
    1.0373500
    BY_Vitebsk
    1.0413501
    PL_Lubelskie
    1.0767470
    (...)

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    Quote Originally Posted by Lucas View Post
    although probably it was done in BAK and is quite noisy
    BAK is obsolete and slow. You are still using it? I have something much faster.

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    Quote Originally Posted by Peterski View Post
    BAK is obsolete and slow. You are still using it? I have something much faster.
    I didn't prepare this dataset.

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    Quote Originally Posted by Lucas View Post
    I didn't prepare this dataset.
    Ale napisałeś "16 chromosom leci, będzie za pół godziny" - to czegoś wolnego używasz.

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    Quote Originally Posted by Peterski View Post
    Results for VK541 (Medieval Lutsk, Ukraine):

    [1] "1. CLOSEST SINGLE ITEM DISTANCE%"
    UA_Zaporizhia-Oblast
    0.5894574
    UA_Volhynia
    0.7805671
    Russia_RUS_Tambov
    0.9203054
    UA_Rivne-Oblast
    0.9251692
    UA_Cherkasy
    0.9893083
    UA_Kiev
    1.0152950
    BY_Grodno
    1.0373500
    BY_Vitebsk
    1.0413501
    PL_Lubelskie
    1.0767470
    (...)
    Can you compare with this one?: Ukrainian_Kiev_4,19.29,17.35,30.54,20.87,1.11,7.08 ,0.21,0.11,0,0,1.79,1.04,0,0.61,0

  9. #29
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    Peterski start with the Iron Age samples.

  10. #30
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    Quote Originally Posted by Aren View Post
    Peterski start with the Iron Age samples.
    Iron Age Norwegians - all of them are more "Swedish-like" than modern Norwegians:

    (which confirms that Norwegians were altered by British admixture after the Iron Age)

    Distance to: VK418
    0.64636290 SE_Sweden-Sigtuna-Medieval
    0.84883803 SE_Svealand
    0.85600409 SE_Vastra-Gotaland
    0.91985488 NO_Midt-Norge
    0.92119813 SE_South-Sweden
    (...)

    Distance to: VK523
    0.89012977 SE_Sweden-Sigtuna-Medieval
    0.94891833 SE_Svealand
    0.97970302 NO_Norway
    0.98672337 NO_Midt-Norge
    0.99326784 DK_Lolland
    (...)

    Distance to: VK391
    0.78377867 SE_Norrbotten
    0.82579659 SE_Svealand
    0.95407285 SE_Sweden-Medelpad
    0.98990353 NO_Troms
    1.05687464 NO_Norway
    (...)

    Distance to: VK390
    1.05033376 DE_Niedersachsen
    1.05082301 SE_Sweden-Medelpad
    1.09623173 SE_Svealand
    1.11042289 SE_Norrbotten
    1.13684871 NO_Troms
    (...)

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