Also, I'd like to learn the latest Vlacho-Bulgarian, sorry "mainland Greek", cope about the fact that Myceneans are closer to BA Anatolians than any other of their contemporary groups in the Balkans.
Were they Anatolian Gypsies, also?
(Southern Arc .tar file)
Code:
fst(prefix, pop1 = "GRC_Mycenaean_BA", pop2 = c("GRC_Logkas_MBA", "BGR_TellKran_EBA", "BGR_Tell_Ezero_EBA", "TUR_E_Arslantepe_EBA", "TUR_Hatay_Alalakh_MLBA", "BGR_Smyadovo_EBA", "BGR_Merichleri_EBA", "BGR_Merichleri_MLBA", "BGR_Dzhulyunitsa_EBA", "BGR_Diamandievo_IA", "BGR_Beli_Breyag_EBA", "BGR_Boyanovo_EBA", "ALB_MBA", "ALB_Çinamak_EBA", "MKD_BA"), adjust_pseudohaploid = FALSE)
ℹ Reading allele frequencies from packedancestrymap files...
ℹ SouthernArc_Public.geno has 5940 samples and 1233013 SNPs
ℹ Calculating allele frequencies from 83 samples in 16 populations
ℹ Expected size of allele frequency data: 296 MB
1233k SNPs read...
✔ 1233013 SNPs read in total
! 7689 SNPs remain after filtering. 6303 are polymorphic.
ℹ Allele frequency matrix for 7689 SNPs and 16 populations is 2 MB
ℹ Computing pairwise f2 for all SNPs and population pairs requires 49 MB RAM without splitting
ℹ Computing without splitting since 49 < 8000 (maxmem)...
ℹ Returning fst blocks
# A tibble: 15 × 4
pop1 pop2 est se
<chr> <chr> <dbl> <dbl>
1 GRC_Mycenaean_BA ALB_Çinamak_EBA 0.541 0.00574
2 GRC_Mycenaean_BA ALB_MBA 0.525 0.00591
3 GRC_Mycenaean_BA BGR_Beli_Breyag_EBA 0.504 0.00628
4 GRC_Mycenaean_BA BGR_Boyanovo_EBA 0.414 0.00760
5 GRC_Mycenaean_BA BGR_Diamandievo_IA 0.526 0.00540
6 GRC_Mycenaean_BA BGR_Dzhulyunitsa_EBA 0.196 0.00653
7 GRC_Mycenaean_BA BGR_Merichleri_EBA 0.525 0.00578
8 GRC_Mycenaean_BA BGR_Merichleri_MLBA 0.537 0.00546
9 GRC_Mycenaean_BA BGR_Smyadovo_EBA 0.305 0.00747
10 GRC_Mycenaean_BA BGR_Tell_Ezero_EBA 0.275 0.00729
11 GRC_Mycenaean_BA BGR_TellKran_EBA 0.183 0.00583
12 GRC_Mycenaean_BA GRC_Logkas_MBA 0.194 0.00605
13 GRC_Mycenaean_BA MKD_BA 0.523 0.00591
14 GRC_Mycenaean_BA TUR_E_Arslantepe_EBA 0.107 0.00439
15 GRC_Mycenaean_BA TUR_Hatay_Alalakh_MLBA 0.0552 0.00240
Poor, catgeorge, things just don't seem to go your way, man ...
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