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Thread: Eurogenes Biogeographic Ancestry Project

  1. #111
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    Quote Originally Posted by Soten View Post

    Thank you


    Quote Originally Posted by warwick View Post
    Simple plot of Northeast European component:

    FI 78.11
    Komi 68.39
    N. Russian 61.59
    RU 49.45
    LT 48.85
    BY 44.73
    PL 33.98
    SE 22.62
    HU 22.50
    RO 19.31
    NO 16.22
    adygei 15.27
    DE 14.59
    TR 12.36
    IR 9.14
    Lezgin 8.68
    AJ 6.96
    UK 4.58
    FR 4.02
    GR 3.68
    SY 3.58
    PT 2.82
    JO 1.51 <-possibly (<2% = noise)
    KSA 1.33
    EG 1.31
    PSTN 1.20
    IE 1.16
    AM 1.00
    ASY 0.99
    Orcadian 0.90
    Tuscan 0.85
    ES 0.80
    N.Italy 0.76
    Mozabite 0.54
    AZJ 0.53
    SJ 0.39
    CY 0.33
    GEJ 0.30
    IRJ 0.26
    IQJ 0.06

    EDIT:
    I excluded the Armenian outliers from the Armenian group.


    Quote Originally Posted by warwick View Post
    West-North Central European

    Orcadian 74.58
    IE 70.11
    NO 64.86
    UK 64.18
    SE 58.21
    DE 54.82
    FR 47.74
    LT 41.48
    PL 40.70
    HU 40.62
    BY 35.43
    ES 33.69
    PT 31.32
    N.Italy 31.22
    Tuscan 26.23
    Tuscan 26.23
    N.Russian 23.64
    GR 16.17
    FI 13.22
    adygei 11.79
    AJ 8.78
    SJ 8.54
    IR 5.00
    TR 4.72
    AM 3.59
    CY 2.76
    SY 2.67
    AZJ 1.27
    LB 1.09
    ASY 1.08
    Mozabite 0.86
    Bedouin 0.80
    Sardinian 0.26
    EG 0.05
    IQJ 0.04

    Armenian and Ashkenazi outliers excluded.

  2. #112
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    error error
    Last edited by Pallantides; 12-12-2010 at 08:37 AM.

  3. #113
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    ^evon made a mistake with the graphs, SE1 is not 4.1% in the Mideastern cluster and according to Davide he did a lot of other calculating mistakes... but I'm to lazy to look at the spreadsheet right now, so I just remove the graphs.

  4. #114
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    West and Central Eurasia 3D view

  5. #115
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    To my eye, these charts seem to show something of a ring. The main connection between populations is the Europe - Middle East - South Asia - Far East one, with a more tenuous one linking the extremes of the circumpolar peoples.

    Do we think that if we had complete samples for all ethnic groups, we'd 'fill in the gaps'? I played around on paint with one graph, trying to work out from geography and ethnohistory WHO would be in the gaps;

    The big red circle with a Ч in it is the Turkic speaking Chuvash on the middle Volga. Seems to me that we ought to stick the following in to tie them in better with the wider scheme; more Komi, Ob Ugrians (Mansi and Khanty), Nenets Samoyeds (to link the arctic continuum).
    Gagauz, Crimean Tatars, Mordva, Kazan Tatars, Siberian Tatars (to link the central Europeans with the Turkics).
    Nogai, Turkmen and Tajiks to get the southern Eurasian link.
    And a big fat load of Tibetans to plug the gap in the south east.

    Do we expect that there'll still be gaps?

    Fascinating to see single ethnoses break down into cluster to demonstrate the plural origins that history often suspected...

    I'm wondering, though; why do the peoples roughly in the middle - Uygurs and Hazara - look so 'stretched'? Is this just a result of how the graph was made, or does it really reflect a greater diversity within their populations?

  6. #116
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    Quote Originally Posted by Lemminkäinen View Post
    Here is an Excel file including all members. Outputted fields

    1 Project member
    2 Nationality for segment
    3 Segment count, included all segments below 300 SNPs. Segment count corresponds average number of segments between the project member and all related individuals in each nationality.

    I have done a minor fix after previous graphics.

    http://www.4shared.com/document/3ioc...nts_count.html
    My result(NO2)

    SE 6,71
    NO 5,67
    UK 5
    HU 4,95
    US 4,74
    FR 4,39
    North_Russia 4,36
    PL 4,33
    BY 4,11
    ES 3,5
    RU 3,43
    PT 3,25
    RO 3,07
    DE 3
    FI 3
    IE 3
    LT 2,9
    Chuvash 2,82
    GR 2,6
    IT 2,56
    Adygei 2,53
    AJ 2,43
    Selkup 1,89
    Pathan 1,59
    ASY 1,56
    IR 1,53
    TR 1,5
    UZ 1,4
    Uygur 1,2
    Burusho 1,04
    IN 1
    Hazara 0,86
    Altai 0,83
    Yakagir 0,75
    Nganassan 0,69
    AA 0,69
    ET 0,63
    East Greenland 0,5
    Tuva 0,5
    Athabaks 0,47
    Yakut 0,43
    Buryat 0,42
    Evenk 0,4
    Orogen 0,33
    West Greenland 0,33
    Mongol 0,28
    Daur 0,22
    Dolgan 0,2
    TU 0,2
    Yoruba 0,19
    CO 0,14
    Pima 0,14
    Xibo 0,14
    Maya 0,11
    She 0,1
    Tujia 0,1
    Han 0,09
    Koryak 0,07
    Bantu 0,06
    JP 0,03

  7. #117
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    Quote Originally Posted by Pallantides View Post
    error error
    [YOUTUBE]4aMD4uy-QGc[/YOUTUBE]


  8. #118
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    Something interesting...

    NO1 - FI 6
    NO2 - FI 3
    NO3 - FI 5,75
    NO5 - FI 5


    I'm from East Norway and supposedly have some Forest Finn ancestry from the 17th century, while NO1 is a West Norwegian.

  9. #119
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    Can someone help me out with the new admixture analysis?


    I'm going to guess none of that is enough to indicate admixture?
    Attached Thumbnails Attached Thumbnails RHHmapper.US2.png  

  10. #120
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    Soten, that's the overall picture. Here are your details:
    Code:
    rs1029145	AFR
    rs10492520	EAS
    rs10514241	EAS
    rs10779907	EAS
    rs10825468	AFR
    rs1105391	EAS
    rs11060233	EAS
    rs12089636	AFR
    rs12217685	EAS
    rs12220022	EAS
    rs13232076	EAS
    rs1334572	AFR
    rs1364017	EAS
    rs1463427	EAS
    rs16839883	EAS
    rs16883494	EAS
    rs16903010	EAS
    rs16903648	AFR
    rs16920051	EAS
    rs16934416	EAS
    rs16957551	AFR
    rs16957597	AFR
    rs16957664	AFR
    rs16988825	AFR
    rs17011662	EAS
    rs17013664	EAS
    rs17013810	EAS
    rs17014788	EAS
    rs17015638	AFR
    rs17044715	EAS
    rs17067539	EAS
    rs17078801	EAS
    rs17087075	AFR
    rs17087095	AFR
    rs17251648	EAS
    rs17599262	EAS
    rs17748939	EAS
    rs1858022	AFR
    rs1892868	AFR
    rs2069683	EAS
    rs2073358	EAS
    rs213135	EAS
    rs2638298	AFR
    rs264701	AFR
    rs307274	EAS
    rs3756514	EAS
    rs3777456	EAS
    rs3780660	EAS
    rs3811842	EAS
    rs3845461	EAS
    rs3862609	EAS
    rs401522	EAS
    rs4939591	EAS
    rs4987774	EAS
    rs6499781	EAS
    rs6812580	AFR
    rs6928877	EAS
    rs7190322	EAS
    rs7201539	AFR
    rs7271632	AFR
    rs7275620	EAS
    rs7290364	EAS
    rs763880	EAS
    rs7784129	EAS
    rs877180	EAS
    rs879017	EAS
    rs9453955	AFR
    rs951954	AFR
    rs9556725	EAS
    rs9812589	AFR
    rs9912490	EAS

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