Post your MDLP K16 results (r files)

**de Burgh II** · 12-18-2016, 02:00 AM

https://drive.google.com/file/d/0B6n...laLUdsc3c/view

----------------------------
FINAL ADMIXTURE PROPORTIONS:
----------------------------

0.01% Amerindian
0.00% Ancestor
24.08% Steppe
0.54% Indian
0.00% Arctic
0.00% Australian
17.30% Caucasian
0.03% EastAfrican
24.17% NorthEastEuropean
0.62% NearEast
32.36% Neolithic
0.89% NorthAfrican
0.00% Oceanic
0.00% Siberian
0.00% SouthEastAsian
0.00% Subsaharian

Least-squares method.

Using 1 population approximation:
1 French @ 2.807646
2 English_Kent_GBR @ 3.273903
3 French_West @ 4.110861
4 Irish_Connacht @ 4.498183
5 English_Cornwall_GBR @ 4.50616
6 Scottish_Grampian @ 4.804782
7 Scottish_Highlands @ 5.036997
8 Irish_Ulster @ 5.043972
9 Irish_Leinster @ 5.044911
10 Irish_Cork_Kerry @ 5.054093
11 English @ 5.307095
12 Scottish_Dumfries_Galloway @ 5.370715
13 Shetlandic @ 5.553936
14 Scottish_Fife @ 5.62729
15 Scottish_Borders @ 5.689276
16 Germans @ 5.876038
17 Irish_Munster @ 5.940789
18 Belgian @ 6.206447
19 French_Northwest @ 6.768803
20 Welsh @ 7.086135
622 iterations.

Using 2 populations approximation:
1 English_Kent_GBR+French @ 1.91342
2 English_Cornwall_GBR+French @ 2.239944
3 French+Irish_Connacht @ 2.398846
4 French+Irish_Cork_Kerry @ 2.575257
5 French+Irish_Ulster @ 2.692467
6 French+French_West @ 2.700947
7 French+Scottish_Highlands @ 2.738021
8 French+Scottish_Grampian @ 2.780301
9 French+Irish_Leinster @ 2.796239
10 French+French @ 2.807646
11 French+Shetlandic @ 2.852628
12 English+French @ 2.919906
13 French+Scottish_Dumfries_Galloway @ 2.969081
14 French+Irish_Munster @ 3.023495
15 French+Scottish_Argyll_Bute_GBR @ 3.039303
16 French+Orcadian @ 3.078358
17 French+Scottish_Fife @ 3.161868
18 English_Kent_GBR+Germans @ 3.164799
19 Scottish_Argyll_Bute_GBR+Spanish_Cataluna_IBS @ 3.260654
20 English_Kent_GBR+English_Kent_GBR @ 3.273903
193753 iterations.

Using 3 populations approximation:
1 50% French +25% French +25% Scottish_Argyll_Bute_GBR @ 1.841411
2 50% French +25% French +25% Orcadian @ 1.911842
3 50% English_Kent_GBR +25% French +25% French @ 1.91342
4 50% English_Kent_GBR +25% Spanish_Castilla_la_Mancha_IBS +25% Belgian @ 1.942616
5 50% Belgian +25% Scottish_Argyll_Bute_GBR +25% Spanish_Aragon_IBS @ 1.957721
6 50% Belgian +25% Scottish_Argyll_Bute_GBR +25% Spanish_Castilla_la_Mancha_IBS @ 1.997433
7 50% Belgian +25% English_Kent_GBR +25% Spanish_Castilla_la_Mancha_IBS @ 2.005674
8 50% Belgian +25% Scottish_Argyll_Bute_GBR +25% Spanish_Cantabria_IBS @ 2.00776
9 50% French +25% English_Cornwall_GBR +25% English_Kent_GBR @ 2.022511
10 50% Belgian +25% English_Cornwall_GBR +25% Spanish_Castilla_la_Mancha_IBS @ 2.034429
11 50% Scottish_Argyll_Bute_GBR +25% French_South +25% Serbian_Serbia @ 2.03568
12 50% Belgian +25% French_South +25% Irish_Munster @ 2.039507
13 50% Belgian +25% Orcadian +25% Spanish_Castilla_la_Mancha_IBS @ 2.041659
14 50% French +25% English_Cornwall_GBR +25% French @ 2.044727
15 50% English_Cornwall_GBR +25% Spanish_Castilla_la_Mancha_IBS +25% Belgian @ 2.046482
16 50% Scottish_Argyll_Bute_GBR +25% Germans +25% Spanish_Aragon_IBS @ 2.052201
17 50% Belgian +25% Dutch +25% French_South @ 2.052755
18 50% English_Kent_GBR +25% Scottish_Argyll_Bute_GBR +25% Spanish_Baleares_IBS @ 2.055356
19 50% French +25% English_Kent_GBR +25% Irish_Connacht @ 2.069723
20 50% Orcadian +25% Bulgarians +25% Spanish_Pais_Vasco_IBS @ 2.070908
46452840 iterations.

Using 4 populations approximation:
1 French+French+French+Scottish_Argyll_Bute_GBR @ 1.841411
2 English_Kent_GBR+Scottish_Argyll_Bute_GBR+Spanish_ Castilla_la_Mancha_IBS+Belgian @ 1.888942
3 English_Kent_GBR+Irish_Connacht+Spanish_Castilla_l a_Mancha_IBS+Belgian @ 1.908905
4 French+French+French+Orcadian @ 1.911842
5 English_Kent_GBR+English_Kent_GBR+French+French @ 1.91342
6 Croat-Croatia+French_South+Scottish_Argyll_Bute_GBR+Belg ian @ 1.915047
7 Croats+French_South+Scottish_Argyll_Bute_GBR+Belgi an @ 1.916098
8 English_Cornwall_GBR+English_Kent_GBR+Spanish_Cast illa_la_Mancha_IBS+Belgian @ 1.931893
9 French+Scottish_Argyll_Bute_GBR+Spanish_Castilla_l a_Mancha_IBS+Belgian @ 1.939349
10 English_Kent_GBR+English_Kent_GBR+Spanish_Castilla _la_Mancha_IBS+Belgian @ 1.942616
11 Scottish_Argyll_Bute_GBR+Spanish_Aragon_IBS+Belgia n+Belgian @ 1.957721
12 English_Kent_GBR+Irish_Cork_Kerry+Spanish_Castilla _la_Mancha_IBS+Belgian @ 1.959614
13 French_South+Hungarians+Scottish_Argyll_Bute_GBR+B elgian @ 1.966112
14 English_Kent_GBR+Scottish_Argyll_Bute_GBR+Spanish_ Aragon_IBS+Belgian @ 1.9683
15 English_Kent_GBR+Shetlandic+Spanish_Castilla_la_Ma ncha_IBS+Belgian @ 1.988143
16 English_Kent_GBR+Orcadian+Spanish_Castilla_la_Manc ha_IBS+Belgian @ 1.989255
17 Croat-Croatia+Scottish_Argyll_Bute_GBR+Spanish_Pais_Vasc o_IBS+Belgian @ 1.990262
18 Irish_Connacht+Scottish_Argyll_Bute_GBR+Spanish_Ar agon_IBS+Belgian @ 1.990867
19 Scottish_Argyll_Bute_GBR+Spanish_Castilla_la_Manch a_IBS+Belgian+Belgian @ 1.997433
20 English_Kent_GBR+Spanish_Castilla_la_Mancha_IBS+Be lgian+Belgian @ 2.005674
21 English_Cornwall_GBR+Irish_Connacht+Spanish_Castil la_la_Mancha_IBS+Belgian @ 2.005822
22 Scottish_Argyll_Bute_GBR+Spanish_Cantabria_IBS+Bel gian+Belgian @ 2.00776
23 French+Orcadian+Spanish_Castilla_la_Mancha_IBS+Bel gian @ 2.012146
24 English_Kent_GBR+Irish_Munster+Spanish_Castilla_la _Mancha_IBS+Belgian @ 2.016045
25 English_Cornwall_GBR+English_Kent_GBR+French+Frenc h @ 2.022511
26 French+Scottish_Argyll_Bute_GBR+Spanish_Aragon_IBS +Belgian @ 2.022637
27 English_Kent_GBR+Scottish_Highlands+Spanish_Castil la_la_Mancha_IBS+Belgian @ 2.033094
28 French_South+Macedonians+Norwegian+Scottish_Argyll _Bute_GBR @ 2.033929
29 English_Cornwall_GBR+Spanish_Castilla_la_Mancha_IB S+Belgian+Belgian @ 2.034429
30 French_South+Scottish_Argyll_Bute_GBR+Scottish_Arg yll_Bute_GBR+Serbian_Serbia @ 2.03568
31 Bosnian+French_South+Scottish_Argyll_Bute_GBR+Belg ian @ 2.036555
32 Dutch+French_South+Scottish_Dumfries_Galloway+Belg ian @ 2.039322
33 French_South+Irish_Munster+Belgian+Belgian @ 2.039507
34 Orcadian+Spanish_Castilla_la_Mancha_IBS+Belgian+Be lgian @ 2.041659
35 Macedonians+Norwegian+Scottish_Argyll_Bute_GBR+Spa nish_Pais_Vasco_IBS @ 2.04166
36 English_Cornwall_GBR+French+French+French @ 2.044727
37 English_Cornwall_GBR+English_Cornwall_GBR+Spanish_ Castilla_la_Mancha_IBS+Belgian @ 2.046482
38 English_Cornwall_GBR+Irish_Connacht+Spanish_Aragon _IBS+Belgian @ 2.046687
39 French_South+Icelandic+Macedonians+Scottish_Argyll _Bute_GBR @ 2.048503
40 Croat-Croatia+French_South+Orcadian+Belgian @ 2.048688
439001760 iterations.

Gaussian method.
Noise dispersion set to 0.31652

Using 1 population approximation:
1 Belgian @ 2.814422
2 Germans @ 3.04369
3 English_Kent_GBR @ 3.822553
4 French @ 4.264583
5 English_Cornwall_GBR @ 4.342937
6 Shetlandic @ 4.348347
7 Irish_Connacht @ 4.381064
8 Scottish_Dumfries_Galloway @ 4.401391
9 Irish_Leinster @ 4.406846
10 Orcadian @ 4.416499
11 French_West @ 4.426633
12 Irish_Cork_Kerry @ 4.430534
13 Dutch @ 4.440221
14 English @ 4.450949
15 Norwegian @ 4.457924
16 Scottish_Borders @ 4.476484
17 Irish_Munster @ 4.481174
18 Swedes @ 4.506929
19 Scottish_Argyll_Bute_GBR @ 4.532354
20 Icelandic @ 4.551856
622 iterations.

Using 2 populations approximation:
1 Germans+Belgian @ 2.68617
2 Belgian+Belgian @ 2.814422
3 Germans+Germans @ 3.04369
4 English_Kent_GBR+Belgian @ 3.323225
5 English_Kent_GBR+Germans @ 3.466281
6 French+Belgian @ 3.517058
7 English_Cornwall_GBR+Belgian @ 3.683334
8 Germans+Orcadian @ 3.689177
9 Icelandic+Belgian @ 3.697646
10 Orcadian+Belgian @ 3.70105
11 Spanish_Aragon_IBS+Belgian @ 3.702194
12 Scottish_Dumfries_Galloway+Belgian @ 3.720696
13 Germans+Icelandic @ 3.739185
14 Spanish_Pais_Vasco_IBS+Belgian @ 3.750339
15 French_West+Belgian @ 3.751538
16 Irish_Leinster+Belgian @ 3.756873
17 Shetlandic+Belgian @ 3.762413
18 Scottish_Borders+Belgian @ 3.762895
19 Germans+Norwegian @ 3.768328
20 Norwegian+Belgian @ 3.768984
193753 iterations.

Using 3 populations approximation:
1 50% Belgian +25% Germans +25% Belgian @ 2.474327
2 50% Germans +25% Belgian +25% Belgian @ 2.68617
3 50% Belgian +25% Spanish_Pais_Vasco_IBS +25% Belgian @ 2.80192
4 50% Belgian +25% Basque_Spanish +25% Belgian @ 2.821503
5 50% Germans +25% Germans +25% Belgian @ 2.887692
6 50% Belgian +25% Spanish_Aragon_IBS +25% Belgian @ 2.926107
7 50% Belgian +25% Basque_Spanish +25% Germans @ 2.94893
8 50% Belgian +25% French_South +25% Belgian @ 2.969785
9 50% Belgian +25% Germans +25% Spanish_Pais_Vasco_IBS @ 2.9764
10 50% Belgian +25% English_Kent_GBR +25% Belgian @ 2.985896
11 50% Belgian +25% English_Kent_GBR +25% Germans @ 3.037874
12 50% Belgian +25% French +25% Belgian @ 3.044588
13 50% Belgian +25% Basque_French +25% Germans @ 3.091333
14 50% Belgian +25% Basque_French +25% Belgian @ 3.101982
15 50% Belgian +25% French_South +25% Germans @ 3.125129
16 50% Belgian +25% Spanish_Cataluna_IBS +25% Belgian @ 3.134296
17 50% Belgian +25% Germans +25% Spanish_Aragon_IBS @ 3.141058
18 50% Germans +25% Basque_Spanish +25% Belgian @ 3.144895
19 50% Belgian +25% French +25% Germans @ 3.148567
20 50% Belgian +25% Spanish_Cantabria_IBS +25% Belgian @ 3.15808
78269316 iterations.

Using 4 populations approximation:
1 Germans+Belgian+Belgian+Belgian @ 2.474327
2 Germans+Germans+Belgian+Belgian @ 2.68617
3 Spanish_Pais_Vasco_IBS+Belgian+Belgian+Belgian @ 2.80192
4 Belgian+Belgian+Belgian+Belgian @ 2.814422
5 Basque_Spanish+Belgian+Belgian+Belgian @ 2.821503
6 Germans+Germans+Germans+Belgian @ 2.887692
7 Spanish_Aragon_IBS+Belgian+Belgian+Belgian @ 2.926107
8 Basque_Spanish+Germans+Belgian+Belgian @ 2.94893
9 French_South+Belgian+Belgian+Belgian @ 2.969785
10 Germans+Spanish_Pais_Vasco_IBS+Belgian+Belgian @ 2.9764
11 English_Kent_GBR+Belgian+Belgian+Belgian @ 2.985896
12 English_Kent_GBR+Germans+Belgian+Belgian @ 3.037874
13 Germans+Germans+Germans+Germans @ 3.04369
14 French+Belgian+Belgian+Belgian @ 3.044588
15 Basque_French+Germans+Belgian+Belgian @ 3.091333
16 Basque_French+Belgian+Belgian+Belgian @ 3.101982
17 French_South+Germans+Belgian+Belgian @ 3.125129
18 Spanish_Cataluna_IBS+Belgian+Belgian+Belgian @ 3.134296
19 Germans+Spanish_Aragon_IBS+Belgian+Belgian @ 3.141058
20 Basque_Spanish+Germans+Germans+Belgian @ 3.144895
21 French+Germans+Belgian+Belgian @ 3.148567
22 Spanish_Cantabria_IBS+Belgian+Belgian+Belgian @ 3.15808
23 Germans+Germans+Spanish_Pais_Vasco_IBS+Belgian @ 3.160231
24 English_Kent_GBR+Germans+Germans+Belgian @ 3.174749
25 Germans+Orcadian+Belgian+Belgian @ 3.177321
26 Germans+Icelandic+Belgian+Belgian @ 3.195493
27 Scottish_Dumfries_Galloway+Belgian+Belgian+Belgian @ 3.198894
28 English_Cornwall_GBR+Belgian+Belgian+Belgian @ 3.207795
29 Italian_Bergamo+Belgian+Belgian+Belgian @ 3.208696
30 Croats+Belgian+Belgian+Belgian @ 3.210062
31 Icelandic+Belgian+Belgian+Belgian @ 3.212688
32 French_West+Belgian+Belgian+Belgian @ 3.232617
33 Scottish_Borders+Belgian+Belgian+Belgian @ 3.236225
34 Irish_Leinster+Belgian+Belgian+Belgian @ 3.253503
35 French_East+Belgian+Belgian+Belgian @ 3.257236
36 English_Cornwall_GBR+Germans+Belgian+Belgian @ 3.260456
37 Germans+Norwegian+Belgian+Belgian @ 3.266159
38 Basque_French+Germans+Germans+Belgian @ 3.266761
39 Orcadian+Belgian+Belgian+Belgian @ 3.26961
40 English+Belgian+Belgian+Belgian @ 3.270954

**de Burgh II** · 12-18-2016, 02:15 AM

Modern 4-admix template file link:

https://www.scribd.com/document/334493150/k16-2

**Damião de Góis** · 12-18-2016, 02:22 AM

I think this is MDLP. It's known for some spelling mistakes like "subsaharian" or "portugese".

**de Burgh II** · 12-18-2016, 02:27 AM

Originally Posted by Endovélico

I think this is MDLP. It's known for some spelling mistakes like "subsaharian" or "portugese".

I think you are right!

Part of Vadim's early releases!

**firemonkey** · 12-18-2016, 03:17 AM

Not sure about this one re nMonte.

1.08% Amerindian
0.22% Ancestor
22.68% Steppe
1.03% Indian
0.03% Arctic
0.18% Australian
19.40% Caucasian
0.00% EastAfrican
27.23% WHG-UHG
0.04% NearEast
27.42% Neolithic
0.71% NorthAfrican
0.00% Oceanic
0.00% Siberian
0.00% SouthEastAsian
0.00% Subsaharian

CPU time = 294.94 sec

[,1] [,2]
[1,] "Frisian" "2.1525"
[2,] "German_NorthGermany" "2.4837"
[3,] "German" "2.538"
[4,] "Scottish_Fife" "2.687"
[5,] "Dane" "2.7113"
[6,] "German_Lipsian" "2.8625"
[7,] "Belgian" "2.9523"
[8,] "Scottish_Dumfries_Galloway" "3.0077"
[9,] "Scottish_Borders" "3.2196"
[10,] "Scottish" "3.2337

[,1] [,2]
[1,] "25.8% Russian-Tver + 74.2% Scottish_Borders" "1.1649"
[2,] "68.9% French_West + 31.1% Russian-Tver" "1.2497"
[3,] "70.3% Scottish_Borders + 29.7% Ukrainian-West" "1.2526"
[4,] "70.6% Scottish_Borders + 29.4% Ukrainian-East" "1.3015"
[5,] "25.4% Russian_Orjol + 74.6% Scottish_Borders" "1.3056"
[6,] "39.8% Polish_East + 60.2% Scottish_Borders" "1.3142"
[7,] "63.7% Scottish_Borders + 36.3% Slovak" "1.3296"
[8,] "71.9% Scottish_Borders + 28.1% Ukrainian" "1.3728"
[9,] "69.2% French_West + 30.8% Russian_Orjol" "1.3814"
[10,] "75.8% Scottish_Borders + 24.2% Ukrainian_WestUkraina" "1.3848"

4 Ancestors Oracle
Version 0.97

16 components mode.
Population data has been read. 704 populations found.
Personal data has been read. 20 approximations mode.
Person: Test5.txt
Threshold of components set to 0.39%

Least-squares method.

Using 1 population approximation:
1 Frisian @ 2.045045
2 German @ 2.19132
3 German_NorthGermany @ 2.325718
4 Dane @ 2.571287
5 Scottish_Fife @ 2.626579
6 German_Lipsian @ 2.811794
7 Scottish_Dumfries_Galloway @ 2.909216
8 Belgian @ 2.914504
9 German @ 2.91498
10 Scottish @ 3.173235
11 Scottish_Borders @ 3.177423
12 Welsh @ 3.301231
13 European_Utah @ 3.403937
14 North_European @ 3.485767
15 Scottish_Grampian @ 3.679216
16 English_GBR @ 3.809807
17 Shetlandic @ 3.829579
18 Irish_Munster @ 3.938918
19 Scottish_Highlands @ 3.960264
20 French_West @ 4.046681
704 iterations.

Using 2 populations approximation:
1 German+Scottish_Borders @ 1.326131
2 German_Lipsian+Scottish_Borders @ 1.343388
3 French_West+Polish_East @ 1.362991
4 Slovak+Irish_Cork_Kerry @ 1.393955
5 Polish_East+Scottish_Borders @ 1.404647
6 Slovak+Irish_Leinster @ 1.436379
7 Slovak+Irish_Ulster @ 1.456547
8 German+Scottish @ 1.465116
9 Slovak+Irish_Ulster @ 1.468024
10 Scottish+German_Lipsian @ 1.477346
11 English+Polish_East @ 1.493498
12 Slovak+Irish_Ireland @ 1.509812
13 German+Irish_Munster @ 1.531413
14 Polish_East+Scottish_Grampian @ 1.534605
15 German_Lipsian+Irish_Munster @ 1.545142
16 German+Shetlandic @ 1.550589
17 Shetlandic+German_Lipsian @ 1.577177
18 German+Scottish_Highlands @ 1.587199
19 German+Scottish_Grampian @ 1.606208
20 English+Slovak @ 1.607436
248160 iterations.

Using 3 populations approximation:
1 50% Scottish_Borders +25% Russian-Tver +25% Welsh @ 1.015186
2 50% Scottish_Borders +25% Russian-Tver +25% French @ 1.097853
3 50% Scottish_Borders +25% European_Utah +25% Russian-Tver @ 1.105999
4 50% Scottish_Borders +25% Russian_Orjol +25% French @ 1.117897
5 50% Scottish_Borders +25% Russian-Tver +25% French_West @ 1.138816
6 50% Scottish_Borders +25% Belgian +25% Russian-Tver @ 1.14351
7 50% Scottish_Borders +25% Russian-Tver +25% Scottish_Borders @ 1.152682
8 50% Scottish_Borders +25% German_Lipsian +25% Polish_East @ 1.154848
9 50% Scottish_Borders +25% German +25% Polish_East @ 1.155286
10 50% Scottish_Borders +25% Belgian +25% Ukrainian @ 1.161251
11 50% Irish_Munster +25% Occitan_Provance +25% Balt @ 1.190029
12 50% Scottish_Borders +25% North_European +25% Russian-Tver @ 1.192388
13 50% Scottish_Borders +25% Belgian +25% Ukrainian-East @ 1.195473
14 50% Scottish_Borders +25% Russian_Orjol +25% French_West @ 1.197526
15 50% Scottish_Borders +25% Russian_Kursk +25% French @ 1.201349
16 50% Scottish_Borders +25% Ukrainian +25% French @ 1.203228
17 50% Scottish_Borders +25% Russian-Tver +25% Scottish_Dumfries_Galloway @ 1.216472
18 50% Scottish_Borders +25% Frisian +25% Ukrainian-East @ 1.216624
19 50% Scottish_Borders +25% Russian_Orjol +25% Scottish_Borders @ 1.217294
20 50% Irish_Leinster +25% Swiss +25% Balt @ 1.217851
36994658 iterations.

Using 4 populations approximation:
1 Russian-Tver+Welsh+Scottish_Borders+Scottish_Borders @ 1.015186
2 Occitan_Provance+Balt+Irish_Munster+Scottish_Borde rs @ 1.058457
3 Russian-Tver+French+Scottish_Borders+Scottish_Borders @ 1.097853
4 European_Utah+Russian-Tver+Scottish_Borders+Scottish_Borders @ 1.105999
5 Irish+Occitan_Provance+Balt+Scottish_Borders @ 1.106522
6 Austrian+French+Pole+Irish-BA @ 1.114373
7 Russian-Tver+Welsh+French_West+Scottish_Borders @ 1.115618
8 Russian_Orjol+French+Scottish_Borders+Scottish_Bor ders @ 1.117897
9 Russian_Kursk+French_Northwest+Irish_Munster+Scott ish_Borders @ 1.117967
10 Swiss+Balt+Irish_Cork_Kerry+Scottish_Borders @ 1.121508
11 Austrian+French+Irish-BA+Ukrainian-Center @ 1.122238
12 French+Irish-BA+German+Polish_East @ 1.123017
13 Russian_Kursk+French+Irish_Munster+Scottish_Border s @ 1.127128
14 Belgian+French+Ukrainian+Irish-BA @ 1.128025
15 French+Irish-BA+German_Lipsian+Polish_East @ 1.12937
16 Ukrainian+French+Irish_Munster+Scottish_Borders @ 1.131087
17 French+Slovak+Irish-BA+Polish_East @ 1.13279
18 Dane+Slovak+Irish-BA+French_East @ 1.136817
19 Russian-Tver+French_West+Scottish_Borders+Scottish_Borders @ 1.138816
20 German_NorthGermany+Occitan_Provance+Pole+Irish-BA @ 1.140049
21 French+German_SouthGermany+Ukrainian+Irish-BA @ 1.141259
22 Belgian+Russian-Tver+Scottish_Borders+Scottish_Borders @ 1.14351
23 Dane+Occitan_Provance+Pole+Irish-BA @ 1.1452
24 Dane+Sorb+Swiss+Irish-BA @ 1.145426
25 Dane+Russian-Tver+French+Scottish_Borders @ 1.146133
26 Irish+Russian_Kursk+French_Northwest+Scottish_Bord ers @ 1.146148
27 Russian_Kursk+French_East+Irish_Munster+Scottish_B orders @ 1.147512
28 French+Russian_Orjol+Welsh+Irish-BA @ 1.148477
29 German_NorthGermany+Sorb+Swiss+Irish-BA @ 1.150254
30 Occitan_Provance+Balt+Irish_Ireland+Scottish_Borde rs @ 1.150522
31 Ukrainian+Welsh+Irish-BA+French_East @ 1.152293
32 Russian-Tver+Scottish_Borders+Scottish_Borders+Scottish_Bo rders @ 1.152682
33 Czech+Dane+Irish-BA+French_East @ 1.153271
34 Occitan_Provance+Balt+Scottish+Irish_Munster @ 1.153857
35 Swiss+Balt+Irish_Ireland+Scottish_Borders @ 1.154162
36 German_Lipsian+Polish_East+Scottish_Borders+Scotti sh_Borders @ 1.154848
37 German+Polish_East+Scottish_Borders+Scottish_Borde rs @ 1.155286
38 Dutch+Occitan_Provance+Balt+Scottish_Borders @ 1.158311
39 North_European+Pole+Swiss+Irish-BA @ 1.158927
40 German_NorthGermany+Slovak+Irish-BA+French_East @ 1.160111
113982841 iterations.

Gaussian method.
Noise dispersion set to 0.31652

Using 1 population approximation:
1 Slovak @ 1.397693
2 Irish @ 1.790226
3 Scottish_Dumfries_Galloway @ 1.833765
4 Dutch @ 1.87079
5 Irish_Munster @ 1.90158
6 Irish_Ulster @ 2.105655
7 Irish_Ulster @ 2.118916
8 Irish_Connacht @ 2.148662
9 Irish_Ireland @ 2.183919
10 English @ 2.187629
11 Irish_Cork_Kerry @ 2.189836
12 German @ 2.265937
13 Dane @ 2.284463
14 Scottish_Highlands @ 2.319271
15 English_GBR @ 2.320626
16 French_West @ 2.326257
17 Sorb @ 2.383325
18 Frisian @ 2.393353
19 European_Utah @ 2.398846
20 Polish_East @ 2.424867
704 iterations.

Using 2 populations approximation:
1 English+Slovak @ 0.337461
2 European_Utah+Slovak @ 0.399468
3 Slovak+Welsh @ 0.469051
4 Irish+Slovak @ 0.512665
5 English_GBR+Slovak @ 0.531224
6 Dane+Slovak @ 0.532281
7 English_Cornwall_GBR+Slovak @ 0.554021
8 English_Kent_GBR+Slovak @ 0.554392
9 Slovak+Scottish_Dumfries_Galloway @ 0.926932
10 Orcadian+Slovak @ 0.963755
11 Slovak+Sorb @ 1.018666
12 French+Slovak @ 1.052041
13 Slovak+Swede @ 1.0632
14 German_NorthGermany+Slovak @ 1.08826
15 Norwegian+Slovak @ 1.12791
16 Dutch+Slovak @ 1.132989
17 Icelandic+Slovak @ 1.142657
18 Slovak+Irish_Munster @ 1.218285
19 Slovak+Irish_Ulster @ 1.256339
20 Slovak+Irish_Ulster @ 1.263085
248160 iterations.

Using 3 populations approximation:
1 50% Slovak +25% Dane +25% English @ 0.293717
2 50% Slovak +25% English +25% English_Kent_GBR @ 0.301582
3 50% Slovak +25% English +25% European_Utah @ 0.303714
4 50% Slovak +25% French +25% Irish @ 0.304725
5 50% Slovak +25% English +25% English_Cornwall_GBR @ 0.306534
6 50% Slovak +25% English +25% Orcadian @ 0.308877
7 50% Slovak +25% English +25% Welsh @ 0.315995
8 50% Slovak +25% English +25% English_GBR @ 0.32318
9 50% Slovak +25% English +25% Norwegian @ 0.323207
10 50% Slovak +25% English +25% Icelandic @ 0.323564
11 50% Slovak +25% English +25% Swede @ 0.331057
12 50% English +25% Slovak +25% Slovak @ 0.337461
13 50% Slovak +25% English +25% Irish @ 0.340009
14 50% Slovak +25% French +25% Icelandic @ 0.343017
15 50% Slovak +25% English +25% German_NorthGermany @ 0.343901
16 50% Slovak +25% French +25% Norwegian @ 0.34421
17 50% Slovak +25% French +25% Orcadian @ 0.344744
18 50% Dane +25% English +25% Slovak @ 0.345139
19 50% Slovak +25% English +25% Sorb @ 0.35923
20 50% Slovak +25% Dane +25% French @ 0.364018
64714085 iterations.

Using 4 populations approximation:
1 Dane+English+Slovak+Slovak @ 0.293717
2 English+English_Kent_GBR+Slovak+Slovak @ 0.301582
3 English+European_Utah+Slovak+Slovak @ 0.303714
4 French+Irish+Slovak+Slovak @ 0.304725
5 English+English_Cornwall_GBR+Slovak+Slovak @ 0.306534
6 English+Orcadian+Slovak+Slovak @ 0.308877
7 English+Slovak+Slovak+Welsh @ 0.315995
8 English+English_GBR+Slovak+Slovak @ 0.32318
9 English+Norwegian+Slovak+Slovak @ 0.323207
10 English+Icelandic+Slovak+Slovak @ 0.323564
11 English+Slovak+Slovak+Swede @ 0.331057
12 English+English+Slovak+Slovak @ 0.337461
13 English+Irish+Slovak+Slovak @ 0.340009
14 French+Icelandic+Slovak+Slovak @ 0.343017
15 English+German_NorthGermany+Slovak+Slovak @ 0.343901
16 French+Norwegian+Slovak+Slovak @ 0.34421
17 French+Orcadian+Slovak+Slovak @ 0.344744
18 Dane+Dane+English+Slovak @ 0.345139
19 English+Slovak+Slovak+Sorb @ 0.35923
20 Dane+French+Slovak+Slovak @ 0.364018
21 European_Utah+Irish+Slovak+Slovak @ 0.370099
22 English+French+Slovak+Slovak @ 0.370754
23 English_Cornwall_GBR+French+Slovak+Slovak @ 0.378086
24 French+Slovak+Slovak+Swede @ 0.379467
25 English_Kent_GBR+French+Slovak+Slovak @ 0.379986
26 Irish+Slovak+Slovak+Welsh @ 0.380779
27 English+Slovak+Slovak+Slovak @ 0.382681
28 French+Irish+Latvian+Slovak @ 0.386324
29 Dutch+French+Slovak+Slovak @ 0.386813
30 Dane+French+Irish+Slovak @ 0.386922
31 English_GBR+French+Slovak+Slovak @ 0.390078
32 French+Slovak+Slovak+Slovak @ 0.391552
33 Dane+English+European_Utah+Slovak @ 0.39659
34 Dane+English+Irish+Slovak @ 0.396975
35 Dane+English+Slovak+Welsh @ 0.399311
36 European_Utah+European_Utah+Slovak+Slovak @ 0.399468
37 French+Irish+Pole+Slovak @ 0.400511
38 Dane+English+Slovak+Sorb @ 0.403813
39 Dutch+English+Slovak+Slovak @ 0.404596
40 European_Utah+French+Slovak+Slovak @ 0.417036
568184000 iterations.

As my known ancestry is British isles I tried a British isles nMonte run.

[1] "1. CLOSEST SINGLE ITEM DISTANCES"
Welsh Scottish_Dumfries_Galloway Scottish_Fife Scottish_Grampian English Irish_Munster
0.05382044 0.05401194 0.05622313 0.06317246 0.06443353 0.06486779
Scottish_Highlands Shetlandic
0.06519356 0.06538540

[1] "2. FULL TABLE nMONTE"
[1] "Ncycles= 1000"
Amerindian Ancestor Steppe Indian Arctic Australian Caucasian EastAfrican NorthEastEuropean NearEast Neolithic NorthAfrican Oceanic
hg 0.0000000 0.0009000 0.2165000 0.0007000 0.0000000 0.00000000 0.23030000 0.00000000 0.263300 0.00000000 0.2885000 0.0008000 0.0000000
fitted 0.0043796 0.0018762 0.2092586 0.0111847 0.0035034 0.00315255 0.18653585 0.00259335 0.257749 0.00612565 0.2791949 0.0147357 0.0054391
dif 0.0043796 0.0009762 -0.0072414 0.0104847 0.0035034 0.00315255 -0.04376415 0.00259335 -0.005551 0.00612565 -0.0093051 0.0139357 0.0054391
Siberian SouthEastAsian Subsaharian
hg 0.00000000 0.0000000 0.0000000
fitted 0.00961035 0.0017711 0.0029391
dif 0.00961035 0.0017711 0.0029391
[1] "distance%=5.1084 / distance=0.051084"

hg
"Welsh" 50.85
"Scottish_Dumfries_Galloway" 49.15
"English" 0
"English_Cornwall_GBR" 0
"English_Kent_GBR" 0
"Ireland" 0
"Irish_Connacht" 0
"Irish_Cork_Kerry" 0
"Irish_Leinster" 0
"Irish_Munster" 0
"Irish_Ulster" 0
"Orcadian" 0
"Scottish_Argyll_Bute_GBR" 0
"Scottish_Borders" 0
"Scottish_Fife" 0
"Scottish_Grampian" 0
"Scottish_Highlands" 0
"Shetlandic" 0

[1] "3. RESTRICTED nMONTE"
[1] "Ncycles= 1000"
Amerindian Ancestor Steppe Indian Arctic Australian Caucasian EastAfrican NorthEastEuropean NearEast Neolithic NorthAfrican Oceanic
hg 0.0000000 0.0009000 0.2165000 0.0007000 0.0000000 0.00000000 0.23030000 0.00000000 0.263300 0.00000000 0.2885000 0.0008000 0.0000000
fitted 0.0043796 0.0018762 0.2092586 0.0111847 0.0035034 0.00315255 0.18653585 0.00259335 0.257749 0.00612565 0.2791949 0.0147357 0.0054391
dif 0.0043796 0.0009762 -0.0072414 0.0104847 0.0035034 0.00315255 -0.04376415 0.00259335 -0.005551 0.00612565 -0.0093051 0.0139357 0.0054391
Siberian SouthEastAsian Subsaharian
hg 0.00000000 0.0000000 0.0000000
fitted 0.00961035 0.0017711 0.0029391
dif 0.00961035 0.0017711 0.0029391
[1] "distance%=5.1084 / distance=0.051084"

hg
"Welsh" 50.85
"Scottish_Dumfries_Galloway" 49.15

Distance is ridiculously high. Only one of my known ancestors is possibly Welsh.

**firemonkey** · 12-18-2016, 05:21 AM

4 mix runs

[1] Target = 20% English + 0% Ireland + 0% Scottish_Grampian + 80% Welsh @ D = 0.0531

[1] Target = 14% English + 0% Ireland + 86% Scottish_Grampian + 0% Finnish @ D = 0.0631

1] Target = 14% English + 0% Ireland + 86% Scottish_Grampian + 0% Orcadian @ D = 0.0631

[1] Target = 0% English + 0% Ireland + 0% Scottish_Grampian + 100% Dutch @ D = 0.0445

[1] Target = 0% English + 0% Ireland + 76% Scottish_Grampian + 24% Denmark @ D = 0.0616

[1] Target = 14% English + 0% Ireland + 86% Scottish_Grampian + 0% Norwegian @ D = 0.0631

[1] Target = 27% English + 0% Ireland + 61% Scottish_Grampian + 12% French @ D = 0.0628

[1] Target = 7% English + 0% Ireland + 40% Scottish_Grampian + 53% German @ D = 0.0565

[1] Target = 9% English + 0% Ireland + 77% Scottish_Grampian + 14% Shetlandic @ D = 0.0631

[1] Target = 11% English + 0% Ireland + 76% Scottish_Grampian + 13% Swedish @ D = 0.0626

[1] Target = 0% English + 0% Ireland + 78% Scottish_Grampian + 22% Poland @ D = 0.0588

[1] Target = 28% English + 0% Ireland + 65% Scottish_Grampian + 6.99999999999999% Spain @ D = 0.0625

[1] Target = 27% English + 0% Ireland + 49% Scottish_Grampian + 24% Switzerland @ D = 0.0553

[1] Target = 13% English + 0% Ireland + 86% Scottish_Grampian + 1% Estonia @ D = 0.0631

[1] Target = 5% English + 0% Ireland + 90% Scottish_Grampian + 4.99999999999999% Latvia @ D = 0.0627

[1] Target = 2% English + 0% Ireland + 91% Scottish_Grampian + 6.99999999999999% Lithuania @ D = 0.0624

[1] Target = 37% English + 0% Ireland + 47% Scottish_Grampian + 16% Tuscan @ D = 0.0518

[1] Target = 25% English + 0% Ireland + 66% Scottish_Grampian + 9% Italian_Jewish @ D = 0.055

[1] Target = 22% English + 0% Ireland + 67% Scottish_Grampian + 11% Ashkenazi_Jew @ D = 0.0529

[1] Target = 19% English + 0% Ireland + 73% Scottish_Grampian + 8% Sephardic @ D = 0.056

**~~Iloko~~** · 12-18-2016, 05:25 AM

Genotype rate is bad for 23andme-V4, FTDNA build 36, & FTDNA build 37 raw datas though.

0.44% Amerindian
0.00% Ancestor
0.48% Steppe
3.38% Indian
0.00% Arctic
1.12% Australian
0.29% Caucasian
0.41% EastAfrican
0.71% NorthEastEuropean
0.03% NearEast
1.03% Neolithic
0.00% NorthAfrican
2.13% Oceanic
4.90% Siberian
85.08% SouthEastAsian
0.00% Subsaharian

...

16 ancestral populations
116463 total SNPs
0 flipped SNPs
21895 heterozygous SNPs
57 no-calls
42961 absent SNPs
0.630629 genotype rate
mode genomewide

43018 SNPs missing (no-call or absent)

**Petalpusher** · 12-18-2016, 06:57 PM

It's a mdlp, will change the title

**Petalpusher** · 12-18-2016, 07:03 PM

----------------------------
FINAL ADMIXTURE PROPORTIONS:
----------------------------

0.00% Amerindian
0.00% Ancestor
20.26% Steppe
0.00% Indian
0.00% Arctic
0.05% Australian
22.27% Caucasian
0.00% EastAfrican
23.80% NorthEastEuropean
0.81% NearEast
32.39% Neolithic
0.41% NorthAfrican
0.00% Oceanic
0.00% Siberian
0.00% SouthEastAsian
0.00% Subsaharian

Code:

Using 1 population approximation:
1 Germans @ 2,467362
2 French_Northwest @ 3,854027
3 French_East @ 3,878346
4 French @ 5,538461
5 France @ 5,823987
6 French_West @ 6,520901
7 Germany_South @ 6,855411
8 Scottish_Dumfries_Galloway @ 7,100669
9 Scottish_Fife @ 7,164851
10 Provance @ 7,234951
11 Scottish_Grampian @ 7,331773
12 Scottish_Borders @ 7,628981
13 German_Lipsian @ 7,672173
14 English @ 7,698642
15 Scottish_Highlands @ 7,825185
16 Dutch @ 7,847752
17 Irish_Connacht @ 7,97824
18 English_Kent_GBR @ 8,163046
19 Irish_Leinster @ 8,230557
20 Irish_Munster @ 8,398733

Using 2 populations approximation:
1 Italian_Bergamo+Norwegian @ 2,529056

Using 3 populations approximation:
1 50% Germans +25% Italian_Bergamo +25% Norwegian @ 2,270777

Using 4 populations approximation:
1 Dutch+French+Germans+Italian_Bergamo @ 2,226687

(They almost got Provence spelling right this time..)

Parents:

Mother

0.00% Amerindian
0.00% Ancestor
20.31% Steppe
0.00% Indian
0.00% Arctic
0.00% Australian
21.52% Caucasian
0.00% EastAfrican
26.25% NorthEastEuropean
0.00% NearEast
31.71% Neolithic
0.00% NorthAfrican
0.00% Oceanic
0.21% Siberian
0.00% SouthEastAsian
0.00% Subsaharian

Code:

Using 1 population approximation:
1 Germans @ 2,920584
2 French_East @ 4,966448
3 French_Northwest @ 4,972009
4 French_West @ 5,626845
5 Scottish_Dumfries_Galloway @ 5,899369
6 French @ 6,03291
7 Scottish_Fife @ 6,119993
8 German_Lipsian @ 6,159936
9 Dutch @ 6,18164
10 Scottish_Borders @ 6,406381
11 Scottish_Grampian @ 6,490404
12 Scottish_Highlands @ 6,686572
13 Germany_South @ 6,694444
14 English @ 6,79532
15 Irish_Connacht @ 6,87083
16 English_Kent_GBR @ 7,079383
17 Irish_Munster @ 7,268632
18 German @ 7,291953
19 Irish_Leinster @ 7,345797
20 France @ 7,39096

Using 2 populations approximation:
1 Germans+Germans @ 2,920584

Using 3 populations approximation:
1 50% Germans +25% Dutch +25% Germans @ 2,755877

Using 4 populations approximation:
1 Dutch+Germans+Germans+Germans @ 2,755877

Father

0.00% Amerindian
0.00% Ancestor
20.27% Steppe
0.00% Indian
0.00% Arctic
0.12% Australian
22.55% Caucasian
0.00% EastAfrican
22.09% NorthEastEuropean
0.02% NearEast
33.72% Neolithic
0.97% NorthAfrican
0.02% Oceanic
0.00% Siberian
0.24% SouthEastAsian
0.00% Subsaharian

Code:

Using 1 population approximation:
1 Germans @ 3,795758
2 French_Northwest @ 4,979148
3 French_East @ 5,005423
4 French @ 5,636452
5 France @ 5,969048
6 Provance @ 6,940078
7 French_West @ 7,772371
8 Germany_South @ 8,41883
9 Scottish_Grampian @ 8,550936
10 Scottish_Dumfries_Galloway @ 8,60288
11 Scottish_Fife @ 8,627665
12 English @ 8,942681
13 Scottish_Borders @ 9,063402
14 English_Kent_GBR @ 9,155003
15 Irish_Connacht @ 9,216856
16 Scottish_Highlands @ 9,22539
17 Irish_Leinster @ 9,368856
18 German_Lipsian @ 9,681348
19 Dutch @ 9,730289
20 Irish_Munster @ 9,774651

Using 2 populations approximation:
1 English_Kent_GBR+Italian_Bergamo @ 2,584695

Using 3 populations approximation:
1 50% Germans +25% French +25% Italian_Bergamo @ 2,269714

Using 4 populations approximation:
1 French+Germans+Germans+Italian_Bergamo @ 2,269714

**~~Iloko~~** · 12-18-2016, 08:08 PM

K11

0.00% African
0.27% Amerindian
3.00% ASI
0.30% Basal
0.00% Iran-Mesolithic
0.17% Neolithic
2.06% Oceanic
2.31% EHG
91.34% SEA
0.00% Siberian
0.57% WHG