Ancient samples GEDmatch kits

**Ajeje Brazorf** · 05-15-2018, 04:30 PM

Krems WA3 is a sample from Lower Austria dated to 31,250–30,690 BP

Kit M004503
1 finnish_1000genomes + malayan_chaubey + orcadian_hgdp + tunisia_henn2012 @ 8.306671
4520 SNPs used in this evaluation (low quality)

**Ajeje Brazorf** · 05-15-2018, 04:31 PM

Kit Number: M671535
Name: I0795_Karsdorf

Kit Number: M789703
Name: I0797_Karsdorf

Kit Number: M636899
Name: I0659_Halberstadt

Kit Number: M176458
Name: I0174_Alsónyék

Kit Number: M913308
Name: I0056_Halberstadt

Kit Number: M242414
Name: I0745_Barcin

Kit Number: M735763
Name: I1099_Barcin

Kit Number: M632231
Name: I1707_Ain-Ghazal

Kit Number: M702927
Name: I0867_Motza

Kit Number: M555562
Name: I0867_Motza

Kit Number: M760471
Name: I1727_Ain-Ghazal

Kit Number: M574673
Name: I1414_Ain-Ghazal

Kit Number: M380900
Name: I1415_Ain-Ghazal

Kit Number: M292012
Name: Bon004_Boncuklu

Kit Number: M468783
Name: Bon001_Boncuklu

Kit Number: M217969
Name: I1072_Natufian

Kit Number: M814796
Name: I1710_Ghazal

Kit Number: M224187
Name: I0861_Natufian

Kit Number: M691423
Name: I0861_Natufian

Kit Number: M522480
Name: I1671_Gabi

Kit Number: M944437
Name: Oase1_Carpathian

Kit Number: M484421
Name: I1945_Dareh

Kit Number: M784966
Name: I1293_Hotu

Kit Number: M594637
Name: Brana1_Brana

Kit Number: M418269
Name: I0211_Karelia

Kit Number: M106569
Name: StF11_Sweden

Kit Number: M309485
Name: GoyetQ116_Belgium

Kit Number: M001884
Name: HG1_Latvia

Kit Number: M004503
Name: KremsWA3_Austria

Kit Number: M792385
Name: HG3_Latvia

Kit Number: M324269
Name: I0434_Khvalynsk

Kit Number: Z541168
Name: HG1_Ukraine

Kit Number: Z455885
Name: N1_Ukraine

Kit Number: Z917313
Name: I1096_Barcin

Kit Number: Z973663
Name: I0708_Barcin

Kit Number: Z371930
Name: I1500_Kompolt

Kit Number: Z578297
Name: I1102_Barcin

Kit Number: Z614779
Name: I0012_I2c

Kit Number: Z249253
Name: I1496_Apc

Kit Number: Z615442
Name: HG1_Ukraine_HQ

Kit Number: Z229669
Name: HG3_Latvia_HQ

Kit Number: Z017041
Name: I0700 Malak Preslavets

Kit Number: Z113504
Name: I1108 Malak Preslavets

Kit Number: Z002783
Name: *VAR43

Kit Number: Z043955
Name: DA125 Eurasian Steppe

Kit Number: Z456040
Name: DA125 Eurasian Steppe v3

**Ajeje Brazorf** · 05-15-2018, 04:32 PM

M063398 Bar31 Anatolian Neolithic, Barcin, Turkey, 6419-6238 calBCE
M220828 AH2 Early PPN Tepe Abdul Hosein Iran 8205-7756 calBCE (10215-976)
M249214 GD13A-I1290 Early Neolithic Ganj Dareh Iran 8179-7613 calBCE
M392829 WC1 Wezmeh Cave, Iran 7455-7082 calBCE (9465-9092 ybp)
M417000 Bon002 Early PPN Central Anatolia Boncuklu 8279-7977 BCE)
M423599 I0867 Levant PPNB Motza Israel 7300-6750 BCE (9310-8760 BP)
M510029 tep002 Tepecik-Çiftlik (level 5) c. 6500 BCE (> 8500 BP)
M572712 Klei10 L. Greek Neolithic, Kleitos, 4230–3995 BCE (6240-6005 BP)
M608390 Hotu IIIb Hotu Cave Iran Mesolithic 9100-8600 BCE)
M658611 Rev5 Greek Neolithic Revenia 6438–6264 BCE (8448-8274 BP)
M701826 Bon002 depth>=2 Early PPN Central Anatolia Boncuklu 8279-7977 BCE
M711494 Bar8 Anatolian Neolithic, Barcin, 6212-6030 BCE (8222-8040 ybp)

**Ajeje Brazorf** · 05-15-2018, 04:36 PM

Kit Number: M423599
Name: *I0867 Levant PPNB Motza Israel 7300-6750 BCE (9310-8760 BP)

Kit Number: Z061309
Name: FN_2 Roman soldier Freiham-Nord, Munich c. 300 CE

Kit Number: Z259390
Name: CL31 Langobard Collino di Superga Italy 580-630 CE

Kit Number: Z411614
Name: MUR Murciélagos de Zuheros cave Spain 7295-7075 calBCE

Kit Number: Z019511
Name: DA65

Kit Number: Z959198
Name: DA59

Kit Number: Z236183
Name: DA125

Kit Number: Z239204
Name: DA101 Tien Shan Hun 1983 BP (uncalibrated)

Kit Number: Z713550
Name: DA171

Kit Number: Z342597
Name: DA222

Kit Number: Z302274
Name: DA111

Kit Number: Z371280
Name: DA119

Kit Number: Z845678
Name: DA228

Kit Number: Z027433
Name: DA28

Kit Number: Z802252
Name: DA45 minDepth>=2 minQual>=15 mapQ>=37

Kit Number: Z031856
Name: DA45

Kit Number: Z710382
Name: DA85

Kit Number: Z580575
Name: DA126

Kit Number: Z511676
Name: DA2

Kit Number: Z906895
Name: DA100

Kit Number: Z547295
Name: DA206

Kit Number: Z143419
Name: DA243

Kit Number: Z610860
Name: DA385

Kit Number: Z423957
Name: DA96

Kit Number: Z855800
Name: DA81

Kit Number: Z285172
Name: DA162

Kit Number: Z923991
Name: DA198

Kit Number: Z697149
Name: DA221

Kit Number: Z780597
Name: DA39

Kit Number: Z419959
Name: DA27

Kit Number: Z777394
Name: DA38

Kit Number: Z698544
Name: DA223

Kit Number: Z577705
Name: DA23

Kit Number: Z330228
Name: DA8

Kit Number: Z035582
Name: DA177

Kit Number: Z682973
Name: DA179

Kit Number: Z368948
Name: DA43

Kit Number: Z150104
Name: DA13

Kit Number: Z436842
Name: DA93

Kit Number: Z263746
Name: DA117

Kit Number: Z759882
Name: DA142

Kit Number: Z710694
Name: DA230

Kit Number: Z232502
Name: DA47

Kit Number: Z032016
Name: DA30

Kit Number: Z042473
Name: DA56

Kit Number: Z877352
Name: DA41

Kit Number: Z382195
Name: DA4

Kit Number: Z789153
Name: DA57

Kit Number: Z871644
Name: DA58

Kit Number: Z384293
Name: DA74

Kit Number: Z637314
Name: DA204

Kit Number: Z933098
Name: DA29

Kit Number: Z282612
Name: MA2208 Kalehoyuk c. 1750 BCE

Kit Number: Z020190
Name: MA2200 Kalehoyuk c. 1750 BCE

Kit Number: Z643830
Name: MA2206 Kalehoyuk 1750 BCE partner of MA2208

Kit Number: Z208691
Name: MA2212 Ovaören 2400-2100 BCE

**Tacitus** · 05-15-2018, 04:53 PM

Originally Posted by Ajeje Brazorf

M063398 Bar31 Anatolian Neolithic, Barcin, Turkey, 6419-6238 calBCE
M220828 AH2 Early PPN Tepe Abdul Hosein Iran 8205-7756 calBCE (10215-976)
M249214 GD13A-I1290 Early Neolithic Ganj Dareh Iran 8179-7613 calBCE
M392829 WC1 Wezmeh Cave, Iran 7455-7082 calBCE (9465-9092 ybp)
M417000 Bon002 Early PPN Central Anatolia Boncuklu 8279-7977 BCE)
M423599 I0867 Levant PPNB Motza Israel 7300-6750 BCE (9310-8760 BP)
M510029 tep002 Tepecik-Çiftlik (level 5) c. 6500 BCE (> 8500 BP)
M572712 Klei10 L. Greek Neolithic, Kleitos, 4230–3995 BCE (6240-6005 BP)
M608390 Hotu IIIb Hotu Cave Iran Mesolithic 9100-8600 BCE)
M658611 Rev5 Greek Neolithic Revenia 6438–6264 BCE (8448-8274 BP)
M701826 Bon002 depth>=2 Early PPN Central Anatolia Boncuklu 8279-7977 BCE
M711494 Bar8 Anatolian Neolithic, Barcin, 6212-6030 BCE (8222-8040 ybp)

Could someone run the Greek Neolithic sample here? Thanks.

**Leto** · 05-15-2018, 05:03 PM

Maybe this thread should be pinned?

**Leto** · 05-15-2018, 05:07 PM

Originally Posted by Tacitus

Could someone run the Greek Neolithic sample here? Thanks.

Admix Results (sorted):

# Population Percent
1 Atlantic_Med 45.3
2 Caucasus 34.58
3 Southwest_Asian 13.5
4 Northwest_African 4.53
5 Sub_Saharan 1.65
6 Southeast_Asian 0.24
7 East_African 0.2

Single Population Sharing:

# Population (source) Distance
1 Sicilian (Dodecad) 18.66
2 Morocco_Jews (Behar) 18.87
3 S_Italian_Sicilian (Dodecad) 19
4 Sephardic_Jews (Behar) 19.75
5 C_Italian (Dodecad) 19.87
6 Tuscan (HGDP) 20.78
7 TSI30 (Metspalu) 21.22
8 Ashkenazi (Dodecad) 22.14
9 Ashkenazy_Jews (Behar) 23.03
10 North_Italian (HGDP) 24.54
11 O_Italian (Dodecad) 24.94
12 Greek (Dodecad) 25.43
13 N_Italian (Dodecad) 26.34
14 Sardinian (HGDP) 27.61
15 Cypriots (Behar) 27.86
16 Andalucia (1000Genomes) 28.83
17 Canarias (1000Genomes) 29.22
18 Murcia (1000Genomes) 29.29
19 Baleares (1000Genomes) 29.49
20 Galicia (1000Genomes) 31.38

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 58.8% Sardinian (HGDP) + 41.2% Samaritians (Behar) @ 4.47
2 56.5% Sardinian (HGDP) + 43.5% Druze (HGDP) @ 4.53
3 50.2% Sardinian (HGDP) + 49.8% Cypriots (Behar) @ 4.75
4 58.9% Sephardic_Jews (Behar) + 41.1% Sardinian (HGDP) @ 6.1
5 56.1% Sardinian (HGDP) + 43.9% Lebanese (Behar) @ 6.53
6 60.4% Morocco_Jews (Behar) + 39.6% Sardinian (HGDP) @ 6.97
7 57.6% Sardinian (HGDP) + 42.4% Palestinian (HGDP) @ 7.17
8 60% Sardinian (HGDP) + 40% Iraq_Jews (Behar) @ 7.32
9 57.4% Sardinian (HGDP) + 42.6% Jordanians (Behar) @ 7.37
10 61% Sardinian (HGDP) + 39% Georgia_Jews (Behar) @ 7.52
11 61.4% Sardinian (HGDP) + 38.6% Iranian_Jews (Behar) @ 7.75
12 57.3% Sardinian (HGDP) + 42.7% Syrians (Behar) @ 7.79
13 60.3% Sardinian (HGDP) + 39.7% Assyrian (Dodecad) @ 7.98
14 60.6% Sardinian (HGDP) + 39.4% Azerbaijan_Jews (Behar) @ 8.17
15 60.4% Sardinian (HGDP) + 39.6% Armenian (Dodecad) @ 8.33
16 56.2% Ashkenazi (Dodecad) + 43.8% Sardinian (HGDP) @ 8.48
17 61.4% Sardinian (HGDP) + 38.6% Armenians_15 (Yunusbayev) @ 8.63
18 55.1% Ashkenazy_Jews (Behar) + 44.9% Sardinian (HGDP) @ 8.73
19 61.8% Sardinian (HGDP) + 38.2% Armenians (Behar) @ 9.1
20 61.5% Sicilian (Dodecad) + 38.5% Sardinian (HGDP) @ 9.1

**Leto** · 05-15-2018, 05:14 PM

Admix Results (sorted):

# Population Percent
1 West_Med 44.55
2 East_Med 36.37
3 North_Atlantic 12.66
4 Red_Sea 5.25
5 Sub-Saharan 1.17

Single Population Sharing:

# Population (source) Distance
1 Sardinian 17.02
2 Algerian_Jewish 22.04
3 Italian_Jewish 23.63
4 South_Italian 24.71
5 West_Sicilian 24.94
6 Sephardic_Jewish 25.47
7 East_Sicilian 26.34
8 Libyan_Jewish 26.48
9 Tunisian_Jewish 26.54
10 Ashkenazi 27
11 Tunisian 27.3
12 Central_Greek 27.35
13 Tuscan 27.4
14 Moroccan 27.87
15 Algerian 28.1
16 Mozabite_Berber 28.18
17 Italian_Abruzzo 28.88
18 Cyprian 29.52
19 Greek_Thessaly 30.09
20 North_Italian 30.33

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 75.7% Sardinian + 24.3% Yemenite_Jewish @ 9.09
2 69.3% Sardinian + 30.7% Samaritan @ 9.37
3 70.6% Sardinian + 29.4% Lebanese_Christian @ 9.44
4 72.8% Sardinian + 27.2% Lebanese_Druze @ 10.11
5 72.4% Sardinian + 27.6% Palestinian @ 10.31
6 67.5% Sardinian + 32.5% Cyprian @ 10.64
7 64.7% Sardinian + 35.3% Tunisian_Jewish @ 10.69
8 59.3% Sardinian + 40.7% Algerian_Jewish @ 10.71
9 64.7% Sardinian + 35.3% Libyan_Jewish @ 10.73
10 72.9% Sardinian + 27.1% Egyptian @ 10.83
11 73.3% Sardinian + 26.7% Jordanian @ 10.9
12 77.8% Sardinian + 22.2% Saudi @ 10.97
13 73.9% Sardinian + 26.1% Bedouin @ 11.07
14 61.9% Sardinian + 38.1% Italian_Jewish @ 11.23
15 72.7% Sardinian + 27.3% Lebanese_Muslim @ 11.46
16 73.1% Sardinian + 26.9% Syrian @ 11.54
17 64.8% Sardinian + 35.2% Sephardic_Jewish @ 11.78
18 76.9% Sardinian + 23.1% Kurdish_Jewish @ 11.78
19 77.3% Sardinian + 22.7% Iranian_Jewish @ 11.85
20 67.5% Sardinian + 32.5% Tunisian @ 12.34