Mixed mode oracle algorithm from Gedmatch applied to G25 Datasheet

**Lemgrant** · 04-17-2019, 08:15 PM

My mother's 23andme DNA results: https://www.theapricity.com/forum/sh...ther-s-results

**Lemgrant** · 04-25-2019, 07:39 PM

G25 RData oracle file for scaled coordinates using the datasheet with averages (Davidski updated the datasheet on April 23,2019)

Download: https://drive.google.com/open?id=1eD...BoGD9mZNzS4dc7

datasheet: https://drive.google.com/open?id=1Zm...hHO-ERvqdsX-8T

example with Grace O'Malley's coordinates

Code:

G25averages_scaled(c(0.138864,0.136081,0.064488,0.052003,0.036314,0.017291,0.001645,0.006231,0.004909,-0.00328,-0.009094,0.004646,-0.011298,-0.009771,0.029994,0.005701,-0.007041,-0.004434,0.000377,0.007879,0.007112,0.007296,-0.005793,0.010845,-0.000479),k=60)

Code:

      [,1]                           [,2]    
 [1,] "Irish"                        "0.0188"
 [2,] "Icelandic"                    "0.0191"
 [3,] "England_Saxon"                "0.0193"
 [4,] "Scottish"                     "0.0196"
 [5,] "Welsh"                        "0.0198"
 [6,] "Orcadian"                     "0.0198"
 [7,] "England_Roman"                "0.0215"
 [8,] "Bell_Beaker_Mittelelbe-Saale" "0.0219"
 [9,] "English"                      "0.0221"
[10,] "England_MBA"                  "0.0224"
[11,] "Norwegian"                    "0.0234"
[12,] "Scotland_LBA"                 "0.0236"
[13,] "English_Cornwall"             "0.0245"
[14,] "Dutch"                        "0.0246"
[15,] "Shetlandic"                   "0.0249"
[16,] "England_IA"                   "0.0255"
[17,] "Swedish"                      "0.0266"
[18,] "England_CA_EBA"               "0.0272"
[19,] "Scotland_MBA"                 "0.028" 
[20,] "IRL_BA"                       "0.0303"
[21,] "DEU_Medieval"                 "0.0305"
[22,] "CZE_Unetice_EBA"              "0.0313"
[23,] "Wales_CA_EBA"                 "0.0313"
[24,] "Bell_Beaker_POL"              "0.0317"
[25,] "Bell_Beaker_England"          "0.0319"
[26,] "Bell_Beaker_CZE"              "0.0323"
[27,] "NLD_BA"                       "0.0327"
[28,] "Scotland_CA_EBA"              "0.0333"
[29,] "German"                       "0.0333"
[30,] "DEU_Halberstadt_LBA"          "0.0339"
[31,] "DEU_Unetice_EBA"              "0.034" 
[32,] "Bell_Beaker_Scotland"         "0.0351"
[33,] "Bell_Beaker_Bavaria"          "0.0356"
[34,] "England_EMBA"                 "0.0358"
[35,] "Bell_Beaker_FRA"              "0.0367"
[36,] "DEU_Alberstedt_LN"            "0.0368"
[37,] "CZE_EBA"                      "0.037" 
[38,] "Bell_Beaker_FRA_C"            "0.037" 
[39,] "Bell_Beaker_NLD"              "0.0372"
[40,] "DEU_BenzigerodeHeimburg_LN"   "0.0402"
[41,] "SWE_IA"                       "0.0405"
[42,] "Belgian"                      "0.0407"
[43,] "SVK_Poprad_Med"               "0.0408"
[44,] "Scythian_MDA_o2"              "0.0413"
[45,] "HUN_Med_Szolad"               "0.0418"
[46,] "SWE_LN"                       "0.0423"
[47,] "ITA_Collegno_Med"             "0.0427"
[48,] "England_LBA"                  "0.0429"
[49,] "Bell_Beaker_HUN_EBA"          "0.0429"
[50,] "POL_Unetice_EBA"              "0.043" 
[51,] "German_East"                  "0.0438"
[52,] "Bell_Beaker_England_EBA"      "0.0439"
[53,] "Levant_LBN_Med_Euro"          "0.0445"
[54,] "POL_Chopice_Wesele_Culture"   "0.0459"
[55,] "SWE_Viking_Age_Sigtuna"       "0.0459"
[56,] "FIN_Levanluhta_IA_o"          "0.046" 
[57,] "Austrian"                     "0.0475"
[58,] "Czech"                        "0.0482"
[59,] "DNK_MN_B"                     "0.0489"
[60,] "USA_colonial_period"          "0.0494"

>

Code:

G25averages_scaled(c(0.138864,0.136081,0.064488,0.052003,0.036314,0.017291,0.001645,0.006231,0.004909,-0.00328,-0.009094,0.004646,-0.011298,-0.009771,0.029994,0.005701,-0.007041,-0.004434,0.000377,0.007879,0.007112,0.007296,-0.005793,0.010845,-0.000479),k=100,mixedmode=T)

Code:

      [,1]                                                       [,2]    
  [1,] "41.1% Bell_Beaker_Mittelelbe-Saale + 58.9% Icelandic"     "0.0161"
  [2,] "39.3% Bell_Beaker_Mittelelbe-Saale + 60.7% Irish"         "0.0161"
  [3,] "41.7% Bell_Beaker_Mittelelbe-Saale + 58.3% England_Saxon" "0.0161"
  [4,] "92.4% Irish + 7.6% UKR_Dereivka_I_En1"                    "0.0162"
  [5,] "96.3% Irish + 3.7% SWE_Motala_HG"                         "0.0164"
  [6,] "18.5% CZE_Starounetice_EBA + 81.5% Welsh"                 "0.0165"
  [7,] "95.7% Irish + 4.3% UKR_N"                                 "0.0165"
  [8,] "96.5% Irish + 3.5% ROU_Iron_Gates_N"                      "0.0166"
  [9,] "87.7% Irish + 12.3% POL_EBA"                              "0.0166"
 [10,] "3.2% Baltic_LVA_HG + 96.8% Irish"                         "0.0166"
 [11,] "3.7% Baltic_EST_Narva + 96.3% Irish"                      "0.0166"
 [12,] "3.2% Baltic_LTU_Narva + 96.8% Irish"                      "0.0167"
 [13,] "46.9% England_Saxon + 53.1% Irish"                        "0.0167"
 [14,] "3.8% Baltic_LVA_MN + 96.2% Irish"                         "0.0167"
 [15,] "2.9% Baltic_LTU_Mesolithic + 97.1% Irish"                 "0.0167"
 [16,] "13.1% Corded_Ware_DEU_o + 86.9% Irish"                    "0.0167"
 [17,] "96.3% Irish + 3.7% ROU_Mesolithic"                        "0.0167"
 [18,] "96% Irish + 4% UKR_Mesolithic"                            "0.0167"
 [19,] "16.5% FIN_Levanluhta_IA_o + 83.5% Irish"                  "0.0167"
 [20,] "97% Irish + 3% SRB_Iron_Gates_HG"                         "0.0168"
 [21,] "97.2% Irish + 2.8% POL_BKG_N_o1"                          "0.0168"
 [22,] "52.4% England_Saxon + 47.6% Orcadian"                     "0.0168"
 [23,] "3.2% HUN_Koros_N_HG + 96.8% Irish"                        "0.0168"
 [24,] "4.1% Baltic_EST_Comb_Ceramic + 95.9% Irish"               "0.0168"
 [25,] "96.8% Irish + 3.2% ROU_Iron_Gates_HG"                     "0.0168"
 [26,] "2.3% BEL_Loschbour + 97.7% Irish"                         "0.0168"
 [27,] "89.2% Irish + 10.8% UKR_Dereivka_I_En2"                   "0.0169"
 [28,] "96.4% Irish + 3.6% NOR_N_HG"                              "0.0169"
 [29,] "53.3% Icelandic + 46.7% Welsh"                            "0.0169"
 [30,] "2% Iberia_Northwest_Meso + 98% Irish"                     "0.017" 
 [31,] "47.3% Icelandic + 52.7% Irish"                            "0.017" 
 [32,] "41% England_Roman + 59% England_Saxon"                    "0.017" 
 [33,] "42% Bell_Beaker_Mittelelbe-Saale + 58% Welsh"             "0.0171"
 [34,] "96.5% Irish + 3.5% NOR_Mesolithic"                        "0.0171"
 [35,] "97.7% Irish + 2.3% WHG"                                   "0.0171"
 [36,] "51.9% England_Saxon + 48.1% Scottish"                     "0.0171"
 [37,] "12.3% Corded_Ware_POL + 87.7% Irish"                      "0.0171"
 [38,] "18.5% Bell_Beaker_NLD + 81.5% Irish"                      "0.0172"
 [39,] "97.8% Irish + 2.2% ITA_Villabruna"                        "0.0172"
 [40,] "15.4% CZE_Starounetice_EBA + 84.6% England_Saxon"         "0.0172"
 [41,] "14.9% CZE_Starounetice_EBA + 85.1% Icelandic"             "0.0172"
 [42,] "52.7% England_Saxon + 47.3% Welsh"                        "0.0172"
 [43,] "21.8% CZE_Unetice_EBA + 78.2% Irish"                      "0.0173"
 [44,] "79.3% Irish + 20.7% NLD_BA"                               "0.0173"
 [45,] "29.2% Bell_Beaker_NLD + 70.8% English"                    "0.0174"
 [46,] "20.9% Bell_Beaker_England + 79.1% Irish"                  "0.0174"
 [47,] "9.1% Corded_Ware_Baltic + 90.9% Irish"                    "0.0174"
 [48,] "40.5% Bell_Beaker_Mittelelbe-Saale + 59.5% Scottish"      "0.0174"
 [49,] "84.7% Irish + 15.3% SWE_LN"                               "0.0174"
 [50,] "74.4% Irish + 25.6% Swedish"                              "0.0174"
 [51,] "5% Baltic_LVA_BA + 95% Irish"                             "0.0174"
 [52,] "19.1% DEU_Unetice_EBA + 80.9% Irish"                      "0.0175"
 [53,] "24.5% NLD_BA + 75.5% Scottish"                            "0.0175"
 [54,] "84.7% Irish + 15.3% Scythian_MDA_o2"                      "0.0175"
 [55,] "32.4% England_MBA + 67.6% Irish"                          "0.0175"
 [56,] "12.2% CZE_Starounetice_EBA + 87.8% Irish"                 "0.0175"
 [57,] "92.9% Scottish + 7.1% UKR_Dereivka_I_En1"                 "0.0175"
 [58,] "86.5% Irish + 13.5% SWE_Viking_Age_Sigtuna"               "0.0175"
 [59,] "66.4% England_Saxon + 33.6% Scotland_LBA"                 "0.0176"
 [60,] "6.1% Baltic_LTU_BA + 93.9% Irish"                         "0.0176"
 [61,] "17% FIN_Levanluhta_IA_o + 83% Scottish"                   "0.0176"
 [62,] "96.5% Scottish + 3.5% SWE_Motala_HG"                      "0.0176"
 [63,] "62.8% England_Saxon + 37.2% English"                      "0.0176"
 [64,] "20.9% Bell_Beaker_NLD + 79.1% Scottish"                   "0.0176"
 [65,] "23.6% England_CA_EBA + 76.4% Irish"                       "0.0176"
 [66,] "93.9% Irish + 6.1% Latvian"                               "0.0176"
 [67,] "22.7% Bell_Beaker_Scotland + 77.3% Welsh"                 "0.0176"
 [68,] "2.3% Iberia_Southeast_Meso + 97.7% Irish"                 "0.0176"
 [69,] "67.5% English + 32.5% NLD_BA"                             "0.0177"
 [70,] "34.2% Bell_Beaker_NLD + 65.8% English_Cornwall"           "0.0177"
 [71,] "97.2% Irish + 2.8% RUS_Sidelkino_HG"                      "0.0177"
 [72,] "95.9% Scottish + 4.1% UKR_N"                              "0.0177"
 [73,] "97.3% Irish + 2.7% RUS_Samara_HG"                         "0.0177"
 [74,] "24.5% NLD_BA + 75.5% Orcadian"                            "0.0177"
 [75,] "93.5% Irish + 6.5% Lithuanian"                            "0.0177"
 [76,] "90.1% Irish + 9.9% RUS_Poltavka_o"                        "0.0177"
 [77,] "92% Irish + 8% KAZ_Karagash_MLBA"                         "0.0177"
 [78,] "53.8% Icelandic + 46.2% Scottish"                         "0.0177"
 [79,] "48.6% England_Saxon + 51.4% Icelandic"                    "0.0177"
 [80,] "15.9% CZE_EBA + 84.1% Irish"                              "0.0177"
 [81,] "3.7% Baltic_LVA_MN + 96.3% Scottish"                      "0.0177"
 [82,] "6.9% Estonian + 93.1% Irish"                              "0.0177"
 [83,] "7.1% Cossack_Kuban + 92.9% Irish"                         "0.0178"
 [84,] "3.3% ROU_Iron_Gates_N + 96.7% Scottish"                   "0.0178"
 [85,] "37.1% England_Roman + 62.9% Icelandic"                    "0.0178"
 [86,] "11.8% POL_EBA + 88.2% Scottish"                           "0.0178"
 [87,] "16.4% Bell_Beaker_Scotland + 83.6% Irish"                 "0.0178"
 [88,] "55.2% Icelandic + 44.8% Orcadian"                         "0.0178"
 [89,] "57.7% Bell_Beaker_Mittelelbe-Saale + 42.3% Shetlandic"    "0.0178"
 [90,] "3.1% Baltic_LVA_HG + 96.9% Scottish"                      "0.0178"
 [91,] "97.6% Irish + 2.4% RUS_Karelia_HG"                        "0.0178"
 [92,] "94.1% Irish + 5.9% KAZ_Golden_Horde_Euro"                 "0.0178"
 [93,] "96.1% Scottish + 3.9% UKR_Mesolithic"                     "0.0178"
 [94,] "15.2% Bell_Beaker_FRA + 84.8% Irish"                      "0.0179"
 [95,] "14.6% CZE_Starounetice_EBA + 85.4% Scottish"              "0.0179"
 [96,] "20.6% Bell_Beaker_NLD + 79.4% Welsh"                      "0.0179"
 [97,] "3.5% Baltic_EST_Narva + 96.5% Scottish"                   "0.0179"
 [98,] "59.9% Irish + 40.1% Welsh"                                "0.0179"
 [99,] "12.6% Corded_Ware_DEU_o + 87.4% Scottish"                 "0.0179"
[100,] "24.1% Bell_Beaker_England + 75.9% Welsh"                  "0.0179"

and G25 RData oracle file for unscaled coordinates using the datasheet with individuals (Davidski updated the datasheet on April 23,2019)

Download: https://drive.google.com/open?id=1tn...iHCqLWHIHDKCUh

datasheet: https://drive.google.com/open?id=1v1...cim659OgsCx9xD

commands:

Code:

G25n_unscaled(c(your_unscaled_coordinates_here),k=60)

Code:

G25n_unscaled(c(your_unscaled_coordinates_here),k=60,mixedmode=T)

**celticdragongod** · 04-26-2019, 03:57 AM

G25averages_scaled(c(0.134311,0.135065,0.063356,0. 04845,0.037545,0.019801,0.003995,0.010153,0.007363 ,0.000911,-0.003735,0.006294,-0.01442,-0.009358,0.020222,-0.000133,-0.014342,0,0.007793,0.006628,-0.000374,0.000989,0.008258,0.016629,-0.001437),k=60)
[,1] [,2]
[1,] "Scottish" "0.017"
[2,] "Shetlandic" "0.0172"
[3,] "English_Cornwall" "0.0181"
[4,] "Irish" "0.0187"
[5,] "English" "0.0191"
[6,] "Dutch" "0.0192"
[7,] "Orcadian" "0.0192"
[8,] "Welsh" "0.0204"
[9,] "England_Roman" "0.0216"
[10,] "Icelandic" "0.0219"
[11,] "Norwegian" "0.0228"
[12,] "England_Saxon" "0.0242"
[13,] "DEU_Medieval" "0.0243"
[14,] "Scotland_LBA" "0.0254"
[15,] "Swedish" "0.0256"
[16,] "England_IA" "0.0268"
[17,] "England_MBA" "0.0284"
[18,] "German" "0.0286"
[19,] "Bell_Beaker_Mittelelbe-Saale" "0.0319"
[20,] "Bell_Beaker_CZE" "0.032"
[21,] "SWE_IA" "0.032"
[22,] "Scotland_MBA" "0.0334"
[23,] "England_CA_EBA" "0.0336"
[24,] "DEU_Alberstedt_LN" "0.0338"
[25,] "Wales_CA_EBA" "0.0338"
[26,] "Bell_Beaker_POL" "0.0339"
[27,] "IRL_BA" "0.0343"
[28,] "Bell_Beaker_FRA_C" "0.0353"
[29,] "Belgian" "0.0355"
[30,] "England_EMBA" "0.0357"
[31,] "Bell_Beaker_Bavaria" "0.0358"
[32,] "CZE_Unetice_EBA" "0.0364"
[33,] "DEU_Halberstadt_LBA" "0.0365"
[34,] "HUN_Med_Szolad" "0.0374"
[35,] "SVK_Poprad_Med" "0.0376"
[36,] "ITA_Collegno_Med" "0.0376"
[37,] "German_East" "0.0381"
[38,] "Bell_Beaker_England" "0.0385"
[39,] "DEU_Unetice_EBA" "0.0396"
[40,] "NLD_BA" "0.0406"
[41,] "Bell_Beaker_Scotland" "0.0406"
[42,] "Austrian" "0.0416"
[43,] "Levant_LBN_Med_Euro" "0.0418"
[44,] "Bell_Beaker_HUN_EBA" "0.0423"
[45,] "POL_Unetice_EBA" "0.0424"
[46,] "Scotland_CA_EBA" "0.0425"
[47,] "Bell_Beaker_FRA" "0.043"
[48,] "DEU_BenzigerodeHeimburg_LN" "0.043"
[49,] "Czech" "0.0431"
[50,] "CZE_EBA" "0.0434"
[51,] "French_East" "0.0439"
[52,] "USA_colonial_period" "0.0445"
[53,] "Bell_Beaker_NLD" "0.0451"
[54,] "French" "0.0459"
[55,] "SWE_Viking_Age_Sigtuna" "0.0464"
[56,] "England_LBA" "0.0465"
[57,] "BGR_Varna_En3" "0.0477"
[58,] "Hungarian" "0.0478"
[59,] "CZE_Hallstatt_Bylany" "0.0481"
[60,] "Iberia_Northeast_c.6CE_PL" "0.0492"

G25averages_scaled(c(0.134311,0.135065,0.063356,0. 04845,0.037545,0.019801,0.003995,0.010153,0.007363 ,0.000911,-0.003735,0.006294,-0.01442,-0.009358,0.020222,-0.000133,-0.014342,0,0.007793,0.006628,-0.000374,0.000989,0.008258,0.016629,-0.001437),k=100,mixedmode=T)
[,1] [,2]
[1,] "45.6% English_Cornwall + 54.4% Shetlandic" "0.0148"
[2,] "7.3% Corded_Ware_Baltic_early + 92.7% English_Cornwall" "0.0151"
[3,] "9.5% DEU_Karsdorf_LN + 90.5% English_Cornwall" "0.0152"
[4,] "91.6% English_Cornwall + 8.4% KAZ_Satan_MLBA_Alakul" "0.0153"
[5,] "10.6% Corded_Ware_DEU + 89.4% English_Cornwall" "0.0153"
[6,] "74.5% English_Cornwall + 25.5% SWE_IA" "0.0153"
[7,] "93.9% English_Cornwall + 6.1% RUS_Poltavka" "0.0154"
[8,] "94.2% English_Cornwall + 5.8% RUS_Afanasievo" "0.0154"
[9,] "93.9% English_Cornwall + 6.1% RUS_Potapovka_MLBA" "0.0155"
[10,] "90.7% English_Cornwall + 9.3% KAZ_Zevakinskiy_BA" "0.0155"
[11,] "95.9% English_Cornwall + 4.1% RUS_Srubnaya_o" "0.0155"
[12,] "94% English_Cornwall + 6% Yamnaya_RUS_Kalmykia" "0.0155"
[13,] "95.5% English_Cornwall + 4.5% RUS_Khvalynsk_En" "0.0155"
[14,] "96.5% English_Cornwall + 3.5% RUS_Sintashta_MLBA_o3" "0.0155"
[15,] "89.2% English_Cornwall + 10.8% RUS_Krasnoyarsk_MLBA" "0.0155"
[16,] "92.1% English_Cornwall + 7.9% KAZ_Dali_MLBA" "0.0155"
[17,] "94.2% English_Cornwall + 5.8% RUS_Catacomb" "0.0156"
[18,] "13.7% CZE_Hallstatt_Bylany + 86.3% Shetlandic" "0.0156"
[19,] "89.2% English_Cornwall + 10.8% RUS_Srubnaya_Alakul_MLBA" "0.0156"
[20,] "68.9% English_Cornwall + 31.1% Swedish" "0.0156"
[21,] "89.6% English_Cornwall + 10.4% KAZ_Kyzlbulak_MLBA1" "0.0156"
[22,] "94.3% English_Cornwall + 5.7% Yamnaya_RUS_Samara" "0.0156"
[23,] "97.2% English_Cornwall + 2.8% RUS_West_Siberia_N" "0.0156"
[24,] "96.4% English_Cornwall + 3.6% RUS_Sintashta_MLBA_o1" "0.0156"
[25,] "39.7% English + 60.3% Shetlandic" "0.0156"
[26,] "51.8% Scottish + 48.2% Shetlandic" "0.0157"
[27,] "94.8% English_Cornwall + 5.2% KAZ_Maitan_MLBA_Alakul_o" "0.0157"
[28,] "89.2% English_Cornwall + 10.8% Finnish" "0.0157"
[29,] "97.3% English_Cornwall + 2.7% RUS_West_Siberia_N_low_res" "0.0158"
[30,] "91.2% English_Cornwall + 8.8% KAZ_Oy_Dzhaylau_MLBA" "0.0158"
[31,] "11.1% Corded_Ware_CZE + 88.9% English_Cornwall" "0.0158"
[32,] "90.3% English_Cornwall + 9.7% Ingrian" "0.0159"
[33,] "88.8% English_Cornwall + 11.2% RUS_Srubnaya_MLBA" "0.0159"
[34,] "96.6% English_Cornwall + 3.4% RUS_Karelia_HG" "0.0159"
[35,] "96% English_Cornwall + 4% RUS_Lola" "0.0159"
[36,] "91.7% English_Cornwall + 8.3% Finnish_East" "0.0159"
[37,] "96.4% English_Cornwall + 3.6% RUS_Samara_HG" "0.0159"
[38,] "30.9% England_Roman + 69.1% Shetlandic" "0.0159"
[39,] "97% English_Cornwall + 3% KAZ_Dali_EBA" "0.0159"
[40,] "96.4% English_Cornwall + 3.6% KAZ_Oy_Dzhaylau_MLBA_o1" "0.0159"
[41,] "95.6% English_Cornwall + 4.4% KAZ_Kairan_MLBA_o" "0.0159"
[42,] "82.1% English_Cornwall + 17.9% POL_Unetice_EBA" "0.016"
[43,] "85.4% English_Cornwall + 14.6% SWE_LNBA" "0.016"
[44,] "97.4% English_Cornwall + 2.6% KAZ_Botai" "0.016"
[45,] "88.4% English_Cornwall + 11.6% RUS_Sintashta_MLBA" "0.016"
[46,] "93.8% English_Cornwall + 6.2% RUS_Sintashta_MLBA_o2" "0.016"
[47,] "94.8% English_Cornwall + 5.2% Yamnaya_UKR" "0.016"
[48,] "88.7% English_Cornwall + 11.3% KAZ_Lisakovskiy_MLBA_Alakul" "0.016"
[49,] "91.7% English_Cornwall + 8.3% KAZ_Mys_MLBA" "0.016"
[50,] "90.4% English_Cornwall + 9.6% Russian_Tver" "0.0161"
[51,] "96.5% English_Cornwall + 3.5% RUS_Steppe_Maykop" "0.0161"
[52,] "91.1% English_Cornwall + 8.9% Russian_Kostroma" "0.0161"
[53,] "83.6% Scottish + 16.4% SWE_IA" "0.0161"
[54,] "92.3% English_Cornwall + 7.7% Vepsian" "0.0161"
[55,] "36.4% Orcadian + 63.6% Shetlandic" "0.0161"
[56,] "89.2% English_Cornwall + 10.8% UKR_Sredny_Stog_II_En" "0.0161"
[57,] "88.2% English_Cornwall + 11.8% KAZ_Kairan_MLBA" "0.0161"
[58,] "91.9% English_Cornwall + 8.1% KAZ_Taldysay_MLBA1" "0.0162"
[59,] "96.5% English_Cornwall + 3.5% RUS_Sidelkino_HG" "0.0162"
[60,] "92.3% English_Cornwall + 7.7% Karelian" "0.0162"
[61,] "10.5% BGR_Varna_En3 + 89.5% Scottish" "0.0162"
[62,] "11.6% BGR_Varna_En3 + 88.4% Shetlandic" "0.0162"
[63,] "85.7% English_Cornwall + 14.3% POL_Chopice_Wesele_Culture" "0.0162"
[64,] "74.7% Irish + 25.3% SWE_IA" "0.0162"
[65,] "91.1% English_Cornwall + 8.9% Estonian" "0.0162"
[66,] "35.8% Dutch + 64.2% Shetlandic" "0.0162"
[67,] "95.8% English_Cornwall + 4.2% RUS_Progress_Eneolithic" "0.0162"
[68,] "95% English_Cornwall + 5% RUS_Kubano-Tersk" "0.0162"
[69,] "92.4% English_Cornwall + 7.6% Latvian" "0.0162"
[70,] "89.5% English_Cornwall + 10.5% KAZ_Aktogai_MLBA" "0.0163"
[71,] "97.7% English_Cornwall + 2.3% RUS_AfontovaGora3" "0.0163"
[72,] "66.8% English_Cornwall + 33.2% Norwegian" "0.0163"
[73,] "23.5% DEU_Medieval + 76.5% Shetlandic" "0.0163"
[74,] "94.9% English_Cornwall + 5.1% RUS_Mezhovskaya" "0.0163"
[75,] "92% English_Cornwall + 8% UZB_Kashkarchi_BA" "0.0163"
[76,] "18.3% Bell_Beaker_England + 81.7% English_Cornwall" "0.0163"
[77,] "9.9% FIN_Levanluhta_IA_o + 90.1% Shetlandic" "0.0163"
[78,] "15.7% Bell_Beaker_NLD + 84.3% English_Cornwall" "0.0163"
[79,] "93.4% English_Cornwall + 6.6% Russian_Pinega" "0.0163"
[80,] "8.2% BGR_MLBA + 91.8% English_Cornwall" "0.0164"
[81,] "9.3% Corded_Ware_Baltic + 90.7% English_Cornwall" "0.0164"
[82,] "83.9% Shetlandic + 16.1% SWE_IA" "0.0164"
[83,] "84.9% English_Cornwall + 15.1% SWE_Viking_Age_Sigtuna" "0.0164"
[84,] "92% English_Cornwall + 8% Lithuanian" "0.0164"
[85,] "26.5% Icelandic + 73.5% Shetlandic" "0.0164"
[86,] "97.8% English_Cornwall + 2.2% KAZ_Kanai_MBA" "0.0164"
[87,] "95.3% English_Cornwall + 4.7% RUS_Tagar" "0.0164"
[88,] "81.7% Scottish + 18.3% Swedish" "0.0164"
[89,] "95.9% English_Cornwall + 4.1% KAZ_Zevakinskiy_LBA" "0.0164"
[90,] "90.4% English_Cornwall + 9.6% Russian_Orel" "0.0164"
[91,] "92.4% English_Cornwall + 7.6% Mordovian" "0.0164"
[92,] "88.9% English_Cornwall + 11.1% KAZ_Maitan_MLBA_Alakul" "0.0164"
[93,] "6.4% HUN_Avar_Szolad + 93.6% Scottish" "0.0164"
[94,] "90.8% English_Cornwall + 9.2% Russian_Kursk" "0.0165"
[95,] "94.6% English_Cornwall + 5.4% Komi" "0.0165"
[96,] "36% Irish + 64% Shetlandic" "0.0165"
[97,] "9% Belarusian + 91% English_Cornwall" "0.0165"
[98,] "91.3% English_Cornwall + 8.7% KAZ_Karagash_MLBA" "0.0165"
[99,] "16.5% BGR_Varna_En3 + 83.5% Irish" "0.0165"
[100,] "4.5% Lithuanian + 95.5% Scottish" "0.0165"

G25n_unscaled(c(0.0118,0.0133,0.0168,0.015,0.0122, 0.0071,0.0017,0.0044,0.0036,0.0005,-0.0023,0.0042,-0.0097,-0.0068,0.0149,-0.0001,-0.011,0,0.0062,0.0053,-0.0003,0.0008,0.0067,0.0138,-0.0012),k=60)
[,1] [,2]
[1,] "English_Cornwall:HG00160" "0.0119"
[2,] "English:English2" "0.0119"
[3,] "English_Cornwall:HG00259" "0.0121"
[4,] "Shetlandic:Shetlands3" "0.0121"
[5,] "ITA_Collegno_Med:CL146" "0.0125"
[6,] "Belgian:Belgium23" "0.0134"
[7,] "England_IA:I0160" "0.0136"
[8,] "English_Cornwall:HG00232" "0.0142"
[9,] "Swedish:Sweden4" "0.0143"
[10,] "French:French41" "0.0143"
[11,] "Scottish:Scottish20" "0.0144"
[12,] "Scottish:Scottish9" "0.0145"
[13,] "Scottish:Scottish11" "0.0148"
[14,] "Scottish:Scottish8" "0.0149"
[15,] "Norwegian:NOR108" "0.0151"
[16,] "Irish:Irish55" "0.0154"
[17,] "English:HG01791" "0.0155"
[18,] "Icelandic:NA15766" "0.0157"
[19,] "Scottish:Scottish24" "0.0157"
[20,] "Irish:Irish59" "0.0157"
[21,] "England_Saxon:I0774" "0.0157"
[22,] "Scottish:Scottish18" "0.0158"
[23,] "English_Cornwall:HG00239" "0.0158"
[24,] "Scottish:Scottish27" "0.016"
[25,] "Irish:Irish32" "0.0163"
[26,] "Dutch:Netherlands7" "0.0166"
[27,] "Welsh:WAL003" "0.0167"
[28,] "English:English3" "0.0168"
[29,] "English_Cornwall:HG00261" "0.0168"
[30,] "Irish:Irish37" "0.0169"
[31,] "English_Cornwall:HG00243" "0.0169"
[32,] "Irish:Irish46" "0.017"
[33,] "Welsh:WAL001" "0.017"
[34,] "Irish:Irish42" "0.017"
[35,] "Irish:Irish58" "0.017"
[36,] "England_Saxon:NO3423" "0.0171"
[37,] "Swedish:Sweden5" "0.0171"
[38,] "Orcadian:HGDP00799" "0.0171"
[39,] "Orcadian:HGDP00803" "0.0172"
[40,] "HUN_Med_Szolad:SZ7" "0.0172"
[41,] "HUN_Med_Szolad:SZ16" "0.0173"
[42,] "English_Cornwall:HG00252" "0.0173"
[43,] "Norwegian:NOR101" "0.0174"
[44,] "England_MBA:I7573" "0.0175"
[45,] "Dutch:Netherlands45" "0.0176"
[46,] "Irish:Irish65" "0.0177"
[47,] "Shetlandic:Shetlands1" "0.0177"
[48,] "English_Cornwall:HG00253" "0.0177"
[49,] "Orcadian:HGDP00798" "0.0177"
[50,] "English_Cornwall:HG00264" "0.0178"
[51,] "Icelandic:NA15757" "0.0179"
[52,] "Dutch:Netherlands36" "0.0179"
[53,] "Irish:Irish50" "0.0179"
[54,] "German:German24" "0.018"
[55,] "Dutch:Netherlands42" "0.018"
[56,] "Irish:Irish63" "0.018"
[57,] "Icelandic:NA15759" "0.018"
[58,] "English:England11" "0.018"
[59,] "Scottish:Scottish17" "0.0181"
[60,] "SWE_IA:RISE174" "0.0181"

G25n_unscaled(c(0.0118,0.0133,0.0168,0.015,0.0122, 0.0071,0.0017,0.0044,0.0036,0.0005,-0.0023,0.0042,-0.0097,-0.0068,0.0149,-0.0001,-0.011,0,0.0062,0.0053,-0.0003,0.0008,0.0067,0.0138,-0.0012),k=60,mixedmode=T)
[,1]
[1,] "47.1% DEU_Medieval:NW_255 + 52.9% Irish:Irish46"
[2,] "47.4% Belgian:Belgium23 + 52.6% ITA_Collegno_Med:CL146"
[3,] "46.6% DEU_Medieval:NW_255 + 53.4% Welsh:WAL003"
[4,] "49% ITA_Collegno_Med:CL146 + 51% Shetlandic:Shetlands3"
[5,] "34.2% Dutch:Netherlands54 + 65.8% English_Cornwall:HG00259"
[6,] "32.1% Belgian:Belgium9 + 67.9% ITA_Collegno_Med:CL146"
[7,] "56.3% ITA_Collegno_Med:CL146 + 43.7% Scottish:Scottish11"
[8,] "25.9% French:French20 + 74.1% ITA_Collegno_Med:CL146"
[9,] "32.2% Dutch:Netherlands64 + 67.8% Shetlandic:Shetlands3"
[10,] "46.5% German:German58 + 53.5% Irish:Irish42"
[11,] "45.9% Dutch:Netherlands8 + 54.1% Irish:Irish42"
[12,] "51.1% English_Cornwall:HG00160 + 48.9% Shetlandic:Shetlands3"
[13,] "40.7% Irish:Irish55 + 59.3% Shetlandic:Shetlands3"
[14,] "33.9% DEU_Medieval:NW_255 + 66.1% English:English2"
[15,] "44.1% Irish:Irish42 + 55.9% Scottish:Scottish20"
[16,] "65% Belgian:Belgium23 + 35% Bell_Beaker_NLD:I4076"
[17,] "85.3% Belgian:Belgium23 + 14.7% Corded_Ware_DEU:I1536"
[18,] "44.3% German:German21 + 55.7% Irish:Irish23"
[19,] "33.3% DEU_Medieval:NW_255 + 66.7% English_Cornwall:HG00160"
[20,] "33.8% French:French45 + 66.2% ITA_Collegno_Med:CL146"
[21,] "45.7% Dutch:Netherlands58 + 54.3% Shetlandic:Shetlands1"
[22,] "56.2% English_Cornwall:HG00232 + 43.8% Irish:Irish46"
[23,] "43.1% English_Cornwall:HG00232 + 56.9% Shetlandic:Shetlands3"
[24,] "31.7% Dutch:Netherlands54 + 68.3% English:English2"
[25,] "42.6% French:French18 + 57.4% ITA_Collegno_Med:CL151"
[26,] "60.4% Irish:Irish46 + 39.6% ITA_Collegno_Med:CL145"
[27,] "34.3% England_Saxon:I0159 + 65.7% Shetlandic:Shetlands3"
[28,] "47.7% Dutch:Netherlands8 + 52.3% Scottish:Scottish26"
[29,] "24.9% French:French17 + 75.1% ITA_Collegno_Med:CL146"
[30,] "27.7% Bell_Beaker_FRA_C:I3874 + 72.3% ITA_Collegno_Med:CL146"
[31,] "53.9% Dutch:Netherlands8 + 46.1% Irish:Irish23"
[32,] "31.9% French_East:French24434 + 68.1% ITA_Collegno_Med:CL146"
[33,] "81.3% ITA_Collegno_Med:CL146 + 18.7% Spanish_Castilla_Y_Leon:HG01500"
[34,] "38.2% English_Cornwall:HG00261 + 61.8% ITA_Collegno_Med:CL146"
[35,] "67.3% Belgian:Belgium23 + 32.7% Bell_Beaker_Mittelelbe-Saale:I1549"
[36,] "63.6% Shetlandic:Shetlands3 + 36.4% Swedish:Sweden5"
[37,] "36.4% German:German9 + 63.6% Irish:Irish42"
[38,] "33.5% DEU_Medieval:NW_255 + 66.5% English_Cornwall:HG00259"
[39,] "40.8% DEU_Medieval:NW_255 + 59.2% French:French41"
[40,] "54.1% Dutch:Netherlands8 + 45.9% Irish:Irish34"
[41,] "51% English:English2 + 49% Shetlandic:Shetlands3"
[42,] "69.4% Belgian:Belgium23 + 30.6% DEU_Unetice_EBA:I0164"
[43,] "29.2% French:French43 + 70.8% ITA_Collegno_Med:CL146"
[44,] "32.6% Scottish:Scottish21 + 67.4% Shetlandic:Shetlands3"
[45,] "19.8% Iberia_Northeast_c.8-12CE:I10892 + 80.2% ITA_Collegno_Med:CL146"
[46,] "13% Iberia_Southeast_c.5-8CE:I3575 + 87% ITA_Collegno_Med:CL146"
[47,] "85.8% Belgian:Belgium23 + 14.2% Yamnaya_RUS_Samara:I0439"
[48,] "35.9% HUN_Med_Szolad:SZ16 + 64.1% Shetlandic:Shetlands3"
[49,] "71.8% English_Cornwall:HG00160 + 28.2% Irish:Irish1"
[50,] "35.1% Irish:Irish65 + 64.9% Shetlandic:Shetlands3"
[51,] "24% French:French13 + 76% ITA_Collegno_Med:CL146"
[52,] "36.2% Dutch:Netherlands1 + 63.8% English_Cornwall:HG00239"
[53,] "79.6% ITA_Collegno_Med:CL146 + 20.4% ITA_Collegno_Med:CL23"
[54,] "46.2% Dutch:Netherlands8 + 53.8% English_Cornwall:HG00252"
[55,] "36.6% Dutch:Netherlands54 + 63.4% England_IA:I0160"
[56,] "50.3% English_Cornwall:HG00259 + 49.7% Shetlandic:Shetlands3"
[57,] "32.4% Dutch:Netherlands1 + 67.6% English_Cornwall:HG00232"
[58,] "60.3% English_Cornwall:HG00160 + 39.7% Scottish:Scottish11"
[59,] "24.5% French:French44 + 75.5% ITA_Collegno_Med:CL146"
[60,] "43.2% England_IA:I0160 + 56.8% English_Cornwall:HG00160"
[,2]
[1,] "0.0071"
[2,] "0.0071"
[3,] "0.0072"
[4,] "0.0072"
[5,] "0.0074"
[6,] "0.0075"
[7,] "0.0077"
[8,] "0.0077"
[9,] "0.0077"
[10,] "0.008"
[11,] "0.0081"
[12,] "0.0082"
[13,] "0.0082"
[14,] "0.0083"
[15,] "0.0083"
[16,] "0.0083"
[17,] "0.0083"
[18,] "0.0085"
[19,] "0.0085"
[20,] "0.0085"
[21,] "0.0085"
[22,] "0.0085"
[23,] "0.0085"
[24,] "0.0086"
[25,] "0.0086"
[26,] "0.0086"
[27,] "0.0086"
[28,] "0.0087"
[29,] "0.0087"
[30,] "0.0087"
[31,] "0.0087"
[32,] "0.0087"
[33,] "0.0087"
[34,] "0.0088"
[35,] "0.0088"
[36,] "0.0088"
[37,] "0.0088"
[38,] "0.0088"
[39,] "0.0088"
[40,] "0.0088"
[41,] "0.0088"
[42,] "0.0088"
[43,] "0.0088"
[44,] "0.0088"
[45,] "0.0088"
[46,] "0.0089"
[47,] "0.0089"
[48,] "0.0089"
[49,] "0.0089"
[50,] "0.0089"
[51,] "0.0089"
[52,] "0.0089"
[53,] "0.0089"
[54,] "0.0089"
[55,] "0.0089"
[56,] "0.009"
[57,] "0.009"
[58,] "0.009"
[59,] "0.009"
[60,] "0.009"

**celticdragongod** · 04-26-2019, 03:58 AM

Duplicate.

**Lemgrant** · 04-27-2019, 09:15 PM

Originally Posted by Adam Janossy

Thank you!

that Moldovan:747_R01C02 sample actually clusters with some Croatians and Hungarians

this is my PCA after computing K-means clustering:

**Lucas** · 04-27-2019, 09:37 PM

Moldovan samples (academic) are very west Balkan shifted. It is not only G25 but in many calcs. I wonder why.

**Fiko0** · 05-04-2019, 10:52 AM

Hi,

I downloaded both and installed it but how do i that long code (unscaled coordinates from Davidski)?

**Lemgrant** · 05-04-2019, 11:05 AM

Originally Posted by Fiko0

Hi,

I downloaded both and installed it but how do i that long code (unscaled coordinates from Davidski)?

You mean how you get the G25 coordinates? here: http://bga101.blogspot.com/2018/02/t...available.html

**Fiko0** · 05-04-2019, 11:14 AM

Originally Posted by Lemgrant

You mean how you get the G25 coordinates? here: http://bga101.blogspot.com/2018/02/t...available.html

So i have to send them my myheritage dna data and pay them 12$ to get my G25 coordinates?

**Lemgrant** · 05-04-2019, 11:41 AM

Originally Posted by Fiko0

So i have to send them my myheritage dna data and pay them 12$ to get my G25 coordinates?

Yes, but it's one person, David Wesolowski (aka Davidski http://eurogenes.blogspot.com/).

Thread: Mixed mode oracle algorithm from Gedmatch applied to G25 Datasheet

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