Gedmatch calculators on Vahaduo

**Lucas** · 05-01-2020, 08:40 PM

Originally Posted by dududud

Do you have the PCA with the new french sample?

Gauls?

**~~dududud~~** · 05-02-2020, 07:17 AM

Originally Posted by Lukasz

Gauls?

the bronze & iron samples from the last French study: https://www.ebi.ac.uk/ena/data/view/PRJEB36529

**Graham** · 05-02-2020, 08:55 AM

ran a few Shetlanders through K15 I match on Gedmatch. Easier to get those than other isolated areas. Nice match up to Bronze age Northern Isles.

**~~dududud~~** · 05-02-2020, 10:42 AM

Originally Posted by Graham

ran a few Shetlanders through K15 I match on Gedmatch. Easier to get those than other isolated areas. Nice match up to Bronze age Northern Isles.

Where can I find the French bronze and iron age files to use vahaduo or make a pca?

**Graham** · 05-02-2020, 11:03 AM

Originally Posted by dududud

Where can I find the French bronze and iron age files to use vahaduo or make a pca?

Comes under source when you look in the ancient calcs. http://vahaduo.genetics.ovh/

**~~dududud~~** · 05-02-2020, 04:32 PM

Originally Posted by Graham

Comes under source when you look in the ancient calcs. http://vahaduo.genetics.ovh/

Can you (or someone else) make a PCA with these? run a PCAwith the modern French samples

France_BA_BIS130,45.67,18.46,17.38,13.12,0.15,0.1, 0,0.91,0,1.49,1.98,0.76,0
France_BA_BIS385,45.38,22.23,14.31,2.15,9.39,0,1,0 ,2.19,1.88,0,1.47,0
France_BA_EUG11,42.91,13.91,35.31,0,5.46,0.97,0,0, 0.16,0,1.04,0,0.24
France_BA_NIED,38.72,12.03,34.94,4.58,3.71,0,2.6,2 .05,0.86,0,0,0.49,0.02
France_BA_OBE3626-1,49.85,23.26,11.7,10.39,0,0,0,0,2.22,2.02,0.55,0, 0
France_BA_OBE3722,44.1,28.48,8.5,10.57,0,0.81,4.76 ,0,0,2.79,0,0,0
France_BA_PIR3037AB,33.25,12.47,34.09,0,15.45,0,0, 0.37,0,0.77,1.73,1.88,0
France_BA_PIR3116B,54.96,13.18,16.4,3.3,6.32,0,0.9 7,0.77,0,2.71,1.21,0,0.18
France_BA_PSS4170,43.35,17.37,27.56,0.95,7.12,0.58 ,0,1.05,0,1.55,0.31,0.16,0
France_BA_QUIN234,39.42,12.27,35.9,0,10.5,0.62,0.7 8,0.51,0,0,0,0,0
France_BA_QUIN58,32.26,19.79,31.8,0,4.08,8.53,0.27 ,2,0,1.06,0,0,0.22
France_BA_RIX15,39.19,18.88,27.85,6.01,1.08,1.43,4 .47,0,0.36,0.75,0,0,0
France_BA_RIX2,44.06,18.34,20.84,0,10.48,1.85,2.72 ,0,0,1.72,0,0,0
France_BA_RIX4,46.05,22.18,15.98,3.21,8.49,0.02,2. 93,0,0,0.36,0,0,0.78
France_IA_ATT26,43.25,20.56,23.86,1.11,4.84,0,4.11 ,0,0,0,0.02,0.55,1.71
France_IA_BES1248,50.85,23.52,14.17,4.41,1.84,0,1. 02,0.85,0.65,1.93,0,0,0.76
France_IA_BFM265,50.23,18.91,16.29,3.46,9.55,0.25, 0.21,0,0,0.42,0.35,0.34,0
France_IA_COL11,46.34,25.76,16.72,3.7,0,0,5.86,0,0 ,0,0,0,1.63
France_IA_COL153A,41.26,20.62,18.22,0,16.67,3.22,0 ,0,0,0,0,0,0
France_IA_COL153i,42.21,16.69,22.85,6.74,4.15,0.03 ,0,0,1.68,0,3.73,1.92,0
France_IA_ERS1164,43.93,20.07,18.31,6.75,4.79,0.2, 0.96,0.84,2.7,0,0.11,0,1.32
France_IA_ERS86,37.1,22.42,26.11,2.55,7.85,1.32,0, 0,0,0.15,0.98,0.76,0.75
France_IA_ERS88,37.83,12.85,19.92,3.27,22.4,2.1,0, 0,0,1.23,0,0.39,0
France_IA_Jeb8,43.92,15.69,26.17,0.18,7.86,0.73,0, 0,0,2.59,2.86,0,0
France_IA_NOR2B6,35.99,20.81,21.36,1.94,15.77,3.81 ,0,0,0.31,0,0,0,0
France_IA_NOR3-15,44.5,19.56,20.91,3.4,4.03,2.54,0,0,0.86,0.29,1. 18,2.74,0
France_IA_NOR3-6,44.12,24.13,17.5,7.58,0.59,2.92,1.83,0,0,0.71,0. 38,0.24,0
France_IA_NOR4,34.72,15.03,30.23,0,18.12,0,0,0,1.3 6,0,0.54,0,0
France_IA_PECH5,46.11,10.41,36.34,0,1.22,0.97,0,1. 9,0.91,2.15,0,0,0
France_IA_PEY53,53.92,15.17,13.26,6.82,6.26,2.42,0 ,0,0,0.82,1.32,0,0

**~~Dunai~~** · 05-07-2020, 08:30 PM

Please add all these new Hungarian references to K13, on which I worked for a long time and are based on infinitely more numerous and more carefully selected unbiased samples, and which aim to replace all previous Hungarian references for this calculator:

Hungarian,31.35742857,32.24285714,14.328,7.3168571 43,9.827428571,1.143428571,0.795142857,0.502857143 ,1.178857143,0.612285714,0.276571429,0.293428571,0 .096285714
Hungarian_Alfold,29.27673077,33.27173077,14.505576 92,7.030192308,10.82615385,1.161346154,0.626538462 ,0.579423077,1.2825,0.656730769,0.429615385,0.2209 61538,0.107692308
Hungarian_Budapest,31.35742857,32.24285714,14.328, 7.316857143,9.827428571,1.143428571,0.795142857,0. 502857143,1.178857143,0.612285714,0.276571429,0.29 3428571,0.096285714
Hungarian_Csango,26.32625,29.2275,14.90875,7.75,13 .98375,1.9125,1.555,0.6675,2.1925,0.6625,0.5125,0. 12375,0.18
Hungarian_Northern,31.3126087,35.60608696,12.84695 652,6.06826087,9.393043478,0.814347826,1.046521739 ,0.508695652,1.066521739,0.553478261,0.472608696,0 .173478261,0.134782609
Hungarian_Szekely,28.47555556,28.19555556,15.15916 667,8.2125,12.88833333,1.376388889,0.937222222,0.8 89444444,2.439722222,0.765277778,0.283333333,0.248 611111,0.148333333
Hungarian_Transdanubia,32.22944444,31.69527778,14. 10305556,7.113333333,10.52555556,1.025833333,0.612 777778,0.415,0.916666667,0.598333333,0.428611111,0 .113888889,0.196944444
Hungarian_Transylvania,28.08857143,29.17071429,15. 62214286,8.200714286,11.98857143,1.721428571,1.242 142857,0.426428571,2.154285714,0.763571429,0.27428 5714,0.137142857,0.137142857

These should be replaced:
Csango_Gymes,27.25,29.91,14.27,7.02,11.16,3.75,1.2 5,0.88,2.8,0.76,0,1.00,0
Hungarian,30.92,31.31,13.19,7.45,10.4,1.25,0.85,0. 41,1.35,0.81,0.23,0.27,0.08
Hungarian_East,32.83,34.08,12.65,6.39,8.86,1.15,0. 98,0.75,1.21,0.48,0.62,0.14,0.14
Hungarian_Transdanubia,35.28,29.02,14.14,6.92,11.0 1,0.53,1.25,0.04,1.02,0.57,0.34,0.18,0.24
Szekely_Hungarian,26.90,32.16,14.49,7.67,11.72,1.7 7,0.94,0.66,1.07,0.90,0.45,0.13,0.17

**Leto** · 05-07-2020, 08:35 PM

Luke doesn't update anything, a few things from me have been pending for several days...

**Lucas** · 05-08-2020, 03:00 PM

Originally Posted by Leto

Luke doesn't update anything, a few things from me have been pending for several days...

All updated

Also to K13 added new Hungarian regions

**vbnetkhio** · 05-08-2020, 03:20 PM

Originally Posted by dududud

Can you (or someone else) make a PCA with these? run a PCAwith the modern French samples

France_BA_BIS130,45.67,18.46,17.38,13.12,0.15,0.1, 0,0.91,0,1.49,1.98,0.76,0
France_BA_BIS385,45.38,22.23,14.31,2.15,9.39,0,1,0 ,2.19,1.88,0,1.47,0
France_BA_EUG11,42.91,13.91,35.31,0,5.46,0.97,0,0, 0.16,0,1.04,0,0.24
France_BA_NIED,38.72,12.03,34.94,4.58,3.71,0,2.6,2 .05,0.86,0,0,0.49,0.02
France_BA_OBE3626-1,49.85,23.26,11.7,10.39,0,0,0,0,2.22,2.02,0.55,0, 0
France_BA_OBE3722,44.1,28.48,8.5,10.57,0,0.81,4.76 ,0,0,2.79,0,0,0
France_BA_PIR3037AB,33.25,12.47,34.09,0,15.45,0,0, 0.37,0,0.77,1.73,1.88,0
France_BA_PIR3116B,54.96,13.18,16.4,3.3,6.32,0,0.9 7,0.77,0,2.71,1.21,0,0.18
France_BA_PSS4170,43.35,17.37,27.56,0.95,7.12,0.58 ,0,1.05,0,1.55,0.31,0.16,0
France_BA_QUIN234,39.42,12.27,35.9,0,10.5,0.62,0.7 8,0.51,0,0,0,0,0
France_BA_QUIN58,32.26,19.79,31.8,0,4.08,8.53,0.27 ,2,0,1.06,0,0,0.22
France_BA_RIX15,39.19,18.88,27.85,6.01,1.08,1.43,4 .47,0,0.36,0.75,0,0,0
France_BA_RIX2,44.06,18.34,20.84,0,10.48,1.85,2.72 ,0,0,1.72,0,0,0
France_BA_RIX4,46.05,22.18,15.98,3.21,8.49,0.02,2. 93,0,0,0.36,0,0,0.78
France_IA_ATT26,43.25,20.56,23.86,1.11,4.84,0,4.11 ,0,0,0,0.02,0.55,1.71
France_IA_BES1248,50.85,23.52,14.17,4.41,1.84,0,1. 02,0.85,0.65,1.93,0,0,0.76
France_IA_BFM265,50.23,18.91,16.29,3.46,9.55,0.25, 0.21,0,0,0.42,0.35,0.34,0
France_IA_COL11,46.34,25.76,16.72,3.7,0,0,5.86,0,0 ,0,0,0,1.63
France_IA_COL153A,41.26,20.62,18.22,0,16.67,3.22,0 ,0,0,0,0,0,0
France_IA_COL153i,42.21,16.69,22.85,6.74,4.15,0.03 ,0,0,1.68,0,3.73,1.92,0
France_IA_ERS1164,43.93,20.07,18.31,6.75,4.79,0.2, 0.96,0.84,2.7,0,0.11,0,1.32
France_IA_ERS86,37.1,22.42,26.11,2.55,7.85,1.32,0, 0,0,0.15,0.98,0.76,0.75
France_IA_ERS88,37.83,12.85,19.92,3.27,22.4,2.1,0, 0,0,1.23,0,0.39,0
France_IA_Jeb8,43.92,15.69,26.17,0.18,7.86,0.73,0, 0,0,2.59,2.86,0,0
France_IA_NOR2B6,35.99,20.81,21.36,1.94,15.77,3.81 ,0,0,0.31,0,0,0,0
France_IA_NOR3-15,44.5,19.56,20.91,3.4,4.03,2.54,0,0,0.86,0.29,1. 18,2.74,0
France_IA_NOR3-6,44.12,24.13,17.5,7.58,0.59,2.92,1.83,0,0,0.71,0. 38,0.24,0
France_IA_NOR4,34.72,15.03,30.23,0,18.12,0,0,0,1.3 6,0,0.54,0,0
France_IA_PECH5,46.11,10.41,36.34,0,1.22,0.97,0,1. 9,0.91,2.15,0,0,0
France_IA_PEY53,53.92,15.17,13.26,6.82,6.26,2.42,0 ,0,0,0.82,1.32,0,0

here: