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Thread: Gedmatch calculators on Vahaduo

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    Quote Originally Posted by Leto View Post
    Hey Maul, can you get a Lezgin average for G25? You can use the Behar data for example (n=16).
    Only Davidski or IllustrativeDNA recently can produce new coords.

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    Quote Originally Posted by Lucas View Post
    Only Davidski or IllustrativeDNA recently can produce new coords.
    But I see some people posting updates for G25 here.

    I don't have the data but it's sure available somewhere.

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    Please add this Dodecad K12b average for the municipality of Sparta, Greece. You might want to replace the current Peloponnese average with it, as the Peloponnese is diverse and it is better to have subregional averages.

    Greek_Sparta (N=9),6.69,0.353333333,1.604444444,0.03,25.9777777 8,22.37888889,0.133333333,0.038888889,10.31555556, 0.015555556,32.43555556,0.025555556
    Last edited by Coolguy1; 06-28-2021 at 06:38 PM.

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    https://eurogenes.blogspot.com/2019/...obal25_12.html

    @Lucas, please update the recent g25 datasheet from Eurogenes. I've added some Nepalese samples from Xing et al (2010). Also, If you want to add some Slovenes or North Euros or others from Xing, here it is.

    https://www.theapricity.com/forum/sh...al-samples-G25

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    Quote Originally Posted by Kaazi View Post
    https://eurogenes.blogspot.com/2019/...obal25_12.html

    @Lucas, please update the recent g25 datasheet from Eurogenes. I've added some Nepalese samples from Xing et al (2010). Also, If you want to add some Slovenes or North Euros or others from Xing, here it is.

    https://www.theapricity.com/forum/sh...al-samples-G25
    So you sent it to Davidski and he added? I'm surprised as this is very low coverage dataset.

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    Quote Originally Posted by Kaazi View Post
    https://eurogenes.blogspot.com/2019/...obal25_12.html

    @Lucas, please update the recent g25 datasheet from Eurogenes. I've added some Nepalese samples from Xing et al (2010). Also, If you want to add some Slovenes or North Euros or others from Xing, here it is.

    https://www.theapricity.com/forum/sh...al-samples-G25
    I think I add only few besides Nepalese. It was low coveraged dataset. Maybe Kurd because there were from Iraq.

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    Quote Originally Posted by Lucas View Post
    So you sent it to Davidski and he added? I'm surprised as this is very low coverage dataset.
    Quote Originally Posted by Lucas View Post
    I think I add only few besides Nepalese. It was low coveraged dataset. Maybe Kurd because there were from Iraq.
    We had no data for some Nepalese groups. So, I had to add it. Furthermore, I separated the 3 East Asian outliers of Bahun into Bahun_o.

    It's upto you @Lucas, I think its better not to add any coords if those groups already have good quality coords.

    What about Punjabi_Arain_Pakistan and Andhra Pradesh Brahmin? They are new as well. Some Punjabi_Arain samples are useful.

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    Quote Originally Posted by Kaazi View Post
    We had no data for some Nepalese groups. So, I had to add it. Furthermore, I separated the 3 East Asian outliers of Bahun into Bahun_o.

    It's upto you @Lucas, I think its better not to add any coords if those groups already have good quality coords.

    What about Punjabi_Arain_Pakistan and Andhra Pradesh Brahmin? They are new as well. Some Punjabi_Arain samples are useful.
    Ok I add all preliminary, if no complaints they will stay. But first tell wich symbol is what
    Last edited by Lucas; 06-29-2021 at 06:30 AM.

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    Quote Originally Posted by Lucas View Post
    Ok I add all preliminary, if no complaints they will stay. But first tell wich symbol is what
    Download the supplementary table from here. It contains User Ids (UIDs) with ethnicity. Only the Nepalese from this study has been added to David's dataset, so you dont need to do it again.

    Choose as you like but I suggest you to add Andhra Pradesh Brahmin and Punjabi_Arain_Pakistan since they do not exist in current dataset.

    https://doi.org/10.1016/j.ygeno.2010.07.004

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    Quote Originally Posted by Ion Basescul View Post
    Please add these HarrapaWorld averages

    Code:
    Moldova_North,0.28,7.97,18.24,43.97,0.34,1.42,0.37,0.26,0.27,0.33,22.19,4.24,0.03,0.02,0.05,0.00
    Moldova_Centre,0.76,7.69,19.65,41.28,0.16,1.13,0.58,0.18,0.42,0.51,22.96,4.52,0.04,0.01,0.06,0.05
    Moldova_South,0.40,8.27,20.66,37.94,0.14,1.70,0.43,0.35,0.24,0.22,23.86,5.43,0.14,0.14,0.07,0.00
    These are not yet added.

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