Gedmatch calculators on Vahaduo

[Peterski]

Not only that: this morning the modern populations of Russian_Tver, Russian_Smolensk, Russian_Orel, Russian_Kursk were updated and new ones were added, such as Russian_Belgorod, Russian_Kaluga, Russian_Krasnoborsky, Russian_Leshukonsky, Russian_Pinezhsky, Russian_Pskov, Russian_Ryazan and Russian_Yaroslavl.

These new Russians are from Zhernakova study ("Genome-wide sequence analyses of ethnic populations across Russia") ???

[Lucas]

The fits are terrible though. I don't think its possible to model them with modern day pops and get a great fit. Probably. They could also be blond since blond hair is theorized to originate from ANE and these Tarim mummies were predominantly ANE relic populations.

Also what happened to the various Indonesian, Oceanian, African and Iranian_Turkmen populations in the new updated G25? They are gone from the spreadsheet. I have some of these pops, so I can post the codes for you.

Furthermore, please replace the Udmurt average in G25 with this one instead:

Udmurt,0.106766,-0.02894263333,0.07966043333,0.06559053333,-0.03459096667,0.0077996,0.009588333333,0.01086876667,-0.01240093333,-0.03628933333,0.02159776667,-0.0055001,0.01525263333,-0.03452026667,-0.01097073333,-0.0050516,-0.002533766667,-0.0009586666667,-0.01029463333,-0.0097755,0.0004866,0.0032397,-0.0045601,0.0095032,-0.00283

Please repost. Simply I can't resist adding manually new pops from Davidski sheets to old ones so I just replaced. But also must be reason why he didn't add them, maybe they are too noisy or what in G25?

[Peterski]

No they are not from Zhernakova, I remember they are from a different study.

Zhernakova samples are still not available after 2 years.

[Komintasavalta]

These new Russians are from Zhernakova study ("Genome-wide sequence analyses of ethnic populations across Russia") ???

They're from Jeong et al. 2019 ("The genetic history of admixture across inner Eurasia").

$ curl https://reichdata.hms.harvard.edu/pub/datasets/amh_repo/curated_releases/V44/V44.3/SHARE/public.dir/v44.3_HO_public.anno -so ho.anno
$ curl 'https://drive.google.com/uc?export=download&id=1HYrDwxEXv82DvDLoq736pS5ZTGJA4dn5' -so mis
$ printf %s\\n Russian_Belgorod Russian_Kaluga Russian_Krasnoborsky Russian_Leshukonsky Russian_Pinezhsky Russian_Pskov Russian_Ryazan Russian_Yaroslavl|awk -F: 'NR==FNR{a[$0];next}$1 in a' - mis|cut -d: -f2|cut -d, -f1|awk -F\\t 'NR==FNR{a[$0];next}$2 in a' - ho.anno|cut -f2,4,8,9|tr \\t \;
Rakr-203;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Krasnoborsky;Arkhangelsk region, Krasnoborsky district
Rakr-205;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Krasnoborsky;Arkhangelsk region, Krasnoborsky district
Rakr-237;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Krasnoborsky;Arkhangelsk region, Krasnoborsky district
Rakr-248;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Krasnoborsky;Arkhangelsk region, Krasnoborsky district
Rakr-341;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Krasnoborsky;Arkhangelsk region, Krasnoborsky district
Rakr-345;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Krasnoborsky;Arkhangelsk region, Krasnoborsky district
Rakrlsh-002;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Leshukonsky;Arkhangelsk region, Leshukonsky district
Rakrlsh-140;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Leshukonsky;Arkhangelsk region, Leshukonsky district
Rakrlsh-143;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Leshukonsky;Arkhangelsk region, Leshukonsky district
Rakrlsh-144;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Leshukonsky;Arkhangelsk region, Leshukonsky district
Rakrlsh-149;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Leshukonsky;Arkhangelsk region, Leshukonsky district
Rbgp-200;JeongNatureEcologyEvolution2019;Russian;Belgorod region, Krasnensky, Prohorovsky, Yakovlevsky districts
Rbgp-201;JeongNatureEcologyEvolution2019;Russian;Belgorod region, Krasnensky, Prohorovsky, Yakovlevsky districts
Rbgp-203;JeongNatureEcologyEvolution2019;Russian;Belgorod region, Krasnensky, Prohorovsky, Yakovlevsky districts
Rbgp-205;JeongNatureEcologyEvolution2019;Russian;Belgorod region, Krasnensky, Prohorovsky, Yakovlevsky districts
Rkbo-12;JeongNatureEcologyEvolution2019;Russian;Kaluga region, Baryatinsky, Borovsky districts
Rkbo-16;JeongNatureEcologyEvolution2019;Russian;Kaluga region, Baryatinsky, Borovsky districts
Rkbo-44;JeongNatureEcologyEvolution2019;Russian;Kaluga region, Baryatinsky, Borovsky districts
Rkbo-58;JeongNatureEcologyEvolution2019;Russian;Kaluga region, Baryatinsky, Borovsky districts
RPin-114;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Pinezhsky;Arkhangelsk region, Pinezhsky district
RPin-123;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Pinezhsky;Arkhangelsk region, Pinezhsky district
RPin-143;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Pinezhsky;Arkhangelsk region, Pinezhsky district
RPin-145;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Pinezhsky;Arkhangelsk region, Pinezhsky district
RPin-151;JeongNatureEcologyEvolution2019;Russian_Archangelsk_Pinezhsky;Arkhangelsk region, Pinezhsky district
Rps-002;JeongNatureEcologyEvolution2019;Russian;Pskov region, Ostrov district
Rps-004;JeongNatureEcologyEvolution2019;Russian;Pskov region, Ostrov district
Rps-006;JeongNatureEcologyEvolution2019;Russian;Pskov region, Ostrov district
Rps-012;JeongNatureEcologyEvolution2019;Russian;Pskov region, Ostrov district
Rps-090;JeongNatureEcologyEvolution2019;Russian;Pskov region, Porkhov district
Rps-091;JeongNatureEcologyEvolution2019;Russian;Pskov region, Porkhov district
Rps-098;JeongNatureEcologyEvolution2019;Russian;Pskov region, Porkhov district
Rrzm-08;JeongNatureEcologyEvolution2019;Russian;Ryazan region, Mihailovsky district
Rrzm-10;JeongNatureEcologyEvolution2019;Russian;Ryazan region, Mihailovsky district
Rrzm-13;JeongNatureEcologyEvolution2019;Russian;Ryazan region, Mihailovsky district
Rrzm-16;JeongNatureEcologyEvolution2019;Russian;Ryazan region, Mihailovsky district
Rrzm-83;JeongNatureEcologyEvolution2019;Russian;Ryazan region, Mihailovsky district
Rrzs-3;JeongNatureEcologyEvolution2019;Russian;Ryazan region, Spassky district
Rrzs-7;JeongNatureEcologyEvolution2019;Russian;Ryazan region, Spassky district
Rrzs-11;JeongNatureEcologyEvolution2019;Russian;Ryazan region, Spassky district
Rrzs-32;JeongNatureEcologyEvolution2019;Russian;Ryazan region, Spassky district
Rrzs-58;JeongNatureEcologyEvolution2019;Russian;Ryazan region, Spassky district
Rrzs-66;JeongNatureEcologyEvolution2019;Russian;Ryazan region, Spassky district
Rrzs-88;JeongNatureEcologyEvolution2019;Russian;Ryazan region, Spassky district
RYAR-173;JeongNatureEcologyEvolution2019;Russian;Yaroslavl region
RYAR-223;JeongNatureEcologyEvolution2019;Russian;Yaroslavl region
RYAR-232;JeongNatureEcologyEvolution2019;Russian;Yaroslavl region

There's a huge amount of samples from that paper in 1240K+HO:

$ awk -F\\t '$4=="JeongNatureEcologyEvolution2019"' ho.anno|cut -f8|sort|uniq -c|sort -rn|grep -Ev 'Ignore|outlier'|sed 's/^ *//'
53 Bashkir
49 Russian
37 Buryat
34 Mongol
23 Tajik
22 Mordovian
19 Tatar_Siberian
18 Kazakh
17 Uzbek
17 Azeri
17 Altaian
15 Khakass
15 Karelian
15 Adygei
14 Karakalpak
13 Tatar_Kazan
13 Georgian
13 Dungan
12 Karachai
10 Veps
10 Udmurt
10 Tuvinian
10 Tatar_Mishar
10 Tabasaran
10 Nogai_Stavropol
10 Nivh
10 Nanai
10 Moldavian
10 Lak
10 Khamnegan
10 Ingushian
9 Kabardinian
9 Gagauz
9 Circassian
8 Ukrainian_North
8 Kurd
8 Khakass_Kachin
8 Kaitag
8 Ezid
8 Evenk_Transbaikal
8 Darginian
8 Avar
8 Armenian_Hemsheni
8 Altaian_Chelkan
8 Abazin
7 Shor_Mountain
6 Shor_Khakassia
6 Russian_Archangelsk_Krasnoborsky
6 Ossetian
6 Nogai_Astrakhan
6 Kubachinian
6 Chuvash
6 Besermyan
5 Tubalar
5 Tatar_Siberian_Zabolotniye
5 Russian_Archangelsk_Pinezhsky
5 Russian_Archangelsk_Leshukonsky
5 Evenk_FarEast
4 Ukrainian
4 Kyrgyz_Tajikistan
3 Todzin
3 Negidal
2 Kazakhstan_Botai_Eneolithic

[Peterski]

Yes from Jeong.

Zhernakova study is also from 2019 but samples not public yet.

[Lucas]

Furthermore, please replace the Udmurt average in G25 with this one instead:

Udmurt,0.106766,-0.02894263333,0.07966043333,0.06559053333,-0.03459096667,0.0077996,0.009588333333,0.01086876667,-0.01240093333,-0.03628933333,0.02159776667,-0.0055001,0.01525263333,-0.03452026667,-0.01097073333,-0.0050516,-0.002533766667,-0.0009586666667,-0.01029463333,-0.0097755,0.0004866,0.0032397,-0.0045601,0.0095032,-0.00283

changed and post those references too again

[Kaazi]

Your link is wrong, check it out. I will add when you give me good Telugu, Tamil and Gujarat are already in Davidski sheet official so I copied it, there is something more for them in those link?

I don't know users from those portals. Please give me directly if you want to add.

Damn the link expires so fast. All of the Telugu, Sri Lankan Tamil and Gujarati.

https://docs.google.com/document/d/1...it?usp=sharing

[Lucas]

Damn the link expires so fast. All of the Telugu, Sri Lankan Tamil and Gujarati.

https://docs.google.com/document/d/1...it?usp=sharing

Added

[Ajeje Brazorf]

For Eurogenes K13:

Aboriginal_Australian,0,0,0,0,0,0,14.73,11.06,4.79,0.2,65.9,3.33,0

[Lucas]

For Eurogenes K13:

Aboriginal_Australian,0,0,0,0,0,0,14.73,11.06,4.79,0.2,65.9,3.33,0

Added