Mega QAPDM Models thread

[Gannicus]

I did another model measuring ANF admix in Egypt Third Intermediate Period samples.



References:



A person in the Youtube comments was telling me that MENA groups from the "Levant, North Africa, Middle East" have "very little" ANF admix. Well I did this model and the one with the LBK EEFs, and ~17-18% for a more southern Mena population doesn't qualify as "very little" in my book.

Edit: I just did another one from medieval Syria. On IllustrativeDNA he is labeled as an Arab.

[Gannicus]

Ask and you shall receive they say. IllustrativeDNA updated to AADR v66. One thing that sucks is that all my preset rights are gone.

A steppe/ANF/WHG model of myself with the new dataset:

I'm using the Compatibility V. 66





Rights:

[Gannicus]

I tried doing a full HG model. EHG, CHG, Zagros HG, AHG, Natufian, and WHG.





I switched to using AADR 1240k v66 instead of the compatibility version.

[Gannicus]

Anyone want to try their hand at admix modelling France_HautsdeFrance_Oise_IA (pooled) with Steppe/ANF/WHG? In other datasets they might be called France_Oise_IA.

These are the samples:

I've tried probably over 20 times with different variations of these rights:



I switched the sources to France Mesolithic/Greece EN/ Latvia LN Cordedware and that didn't work.

[AndreiDNA]

This technically isn't qpadm but... I wrote python code that goes through qpfstats output (F2/Fst) and calculates the closest population combo that approximates the target sample. If you buy my qpAdm reports, this will come with them.
My pricing is: Pay to dusqcomputer@gmail.com via Paypal 9$ for fst/f2/f4 analysis (AT1), 7$ for QPADM modeling (AT1), 7$ for custom ethnicity calculator based on Fst/F2 tables (AT1)
These results would be covered under "custom ethnicity calculator based on Fst/F2 tables"
https://docs.google.com/forms/d/e/1F...orm?usp=header

My mom's result (MyHeritage file, v62 dataset)

My result (MyHeritage file, v62 dataset)


Eurogenes K13 result for my mom:
Using 1 populations approximation
1 100% Kargopol_Russian @ 3.414
2 100% Erzya @ 5.774
3 100% Estonian_Polish @ 6.601
4 100% Southwest_Russian @ 7.186
5 100% Russian_Smolensk @ 7.196
6 100% Belorussian @ 7.391
7 100% East_Finnish @ 7.550
8 100% Lithuanian @ 7.676
9 100% Ukrainian_Belgorod @ 8.076
10 100% Estonian @ 8.572

Using 4 populations approximation
1 25% Estonian_Polish + 25% Lithuanian + 25% Lithuanian + 25% Chuvash @ 2.066
2 25% Erzya + 25% Erzya + 25% Estonian_Polish + 25% East_Finnish @ 2.138
3 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Erzya + 25% Estonian @ 2.432
4 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Erzya + 25% Lithuanian @ 2.595
5 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Lithuanian @ 2.713
6 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Belorussian @ 3.009
7 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Estonian_Polish @ 3.106
8 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Kargopol_Russian @ 3.414

Distance: 1.62

45.80% Erzya
27.60% Estonian
12.20% Lithuanian
07.00% Estonian_Polish
03.80% Saami_Finland
01.80% Kargopol_Russian
01.00% Tujia
00.40% Japanese
00.40% She

Eurogenes K13 result for me:

Using 1 populations approximation
1 100% Kargopol_Russian @ 4.416
2 100% Estonian_Polish @ 5.334
3 100% Russian_Smolensk @ 5.719
4 100% Southwest_Russian @ 6.073
5 100% Belorussian @ 6.724
6 100% Ukrainian_Belgorod @ 6.999
7 100% Erzya @ 7.440
8 100% Polish @ 7.745
9 100% Lithuanian @ 7.779
10 100% Ukrainian @ 8.117

Using 4 populations approximation
1 25% Kargopol_Russian + 25% Erzya + 25% Ukrainian + 25% Estonian @ 2.874
2 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Lithuanian + 25% Ukrainian @ 2.880
3 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Estonian_Polish + 25% Estonian_Polish @ 3.265
4 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Polish @ 3.370
5 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Estonian_Polish @ 3.428
6 25% Estonian_Polish + 25% Estonian_Polish + 25% Estonian_Polish + 25% Erzya @ 3.932
7 25% Estonian_Polish + 25% Estonian_Polish + 25% Estonian_Polish + 25% Erzya @ 4.416
8 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Kargopol_Russian + 25% Kargopol_Russian @ 5.334

36.20% Erzya
29.60% Lithuanian
21.40% Estonian
05.00% Kargopol_Russian
03.80% Sardinian
02.20% Ukrainian
00.80% She
00.40% Mayan
00.40% Tujia
00.20% Karitiana

[Gannicus]

I decided to have some fun and model myself with NUE001. He's an Old Kingdom Egyptian dated to around 2800 BC.





This one is from the same list of references.



This model is with Turkey N instead of Turkey Epipaleolithic (Pinarbasi AHG)

[Gannicus]

England Bell beaker + NUE001:





Switzerland Bell beaker + NUE001. Same Rights:

[Gannicus]

More shenanigans with NUE001



References:






references:

[Opie]

I did another model measuring ANF admix in Egypt Third Intermediate Period samples.



References:



A person in the Youtube comments was telling me that MENA groups from the "Levant, North Africa, Middle East" have "very little" ANF admix. Well I did this model and the one with the LBK EEFs, and ~17-18% for a more southern Mena population doesn't qualify as "very little" in my book.

Edit: I just did another one from medieval Syria. On IllustrativeDNA he is labeled as an Arab.

I think Levant among those regions have the highest ANF. Egypt received ANF admix over time and modern Egyptians have higher ANF than those samples.

[Gannicus]

I think Levant among those regions have the highest ANF. Egypt received ANF admix over time and modern Egyptians have higher ANF than those samples.

AndreiDNA did a video on an ancient Egyptian that is new from the Akbari study. Time period I think is still unknown. He was Y-haplo J2a. He also had a respectable amount of ANF also. I just wish we had more aDNA samples from the Old Kingdom, Middle Kingdom, and the Predynastic period. I'm just wondering if some native Egyptians had similar levels of ANF like the individuals from the Third Intermediate Period but in earlier times. I always see stuff saying that ancient Egyptians are close to Levant Neolithic. Levant neolithic from what I have seen is almost half ANF.