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Thread: Eurogenes Biogeographic Ancestry Project

  1. #1061
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    Alright, I got DIY Dodecad to work but how do I get the Eurogenes part to work? Trying to substitute test.par for the DIYDodecadwin dv3.par but it is not working.

    Edit:

    I'm an idiot, reread the blog and found out how to do it, my results:

    28.59% Northeast_Euro
    0.00% Sub-Saharan
    0.08% Berber
    0.36% South_Asian
    55.67% West_Euro
    0.01% Southeast_Asian
    0.00% South_Siberian
    0.00% North_Asian
    0.02% East_Siberian
    0.02% East_Asian
    5.44% East_Mediterranean
    1.70% Middle_Eastern
    6.04% West_Asian
    2.06% Volga-Ural

  2. #1062
    Never meant to be here Frederick's Avatar
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    Fought and won, Barreldriver!
    Bring back the stocks!

  3. #1063
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    Quote Originally Posted by Quasimodem View Post
    [/B]By the way, could some of you do a K=12 (without Volga-Ural and Northeast Euro)? I'm curious to see how those results compare with this. Here are mine:

    Mine look like this, if I remove the Russian and Chuvash cluster:

    ----------------------------
    FINAL ADMIXTURE PROPORTIONS:
    ----------------------------

    0.01% Sub-Saharan
    0.00% North_African
    2.08% South_Asian
    70.53% West_Euro
    0.03% Southeast_Asian
    1.58% South_Siberian
    1.02% North_Asian
    1.53% East_Siberian
    0.00% East_Asian
    3.88% East_Mediterranean
    5.15% Middle_Eastern
    14.18% West_Asian

    CPU time = 416.88 sec

    that was the original:
    My results in that K14, test tool:

    35.26% Northeast_Euro
    0.04% Sub-Saharan
    0.00% North_African
    0.01% South_Asian

    49.38% West_Euro
    0.00% Southeast_Asian
    0.00% South_Siberian
    0.00% North_Asian
    0.01% East_Siberian
    0.00% East_Asian

    2.32% East_Mediterranean
    3.69% Middle_Eastern
    5.14% West_Asian
    4.15% Volga-Ural
    Bring back the stocks!

  4. #1064
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    Quote Originally Posted by Frederick View Post
    Fought and won, Barreldriver!
    Good thing I lost my hammer for a while I was getting pissed.

    I like how the clusters are made up on this compared to Dodecad alone, the NW and Paeo African I scored with Dodecad with this I believe to show up as Berber, coincidentally I have a Mid East score over 1% so the Berber and that I'd think to go hand in hand since it peaks in Saudi's.

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    Berber....
    Has Polako updated the file?
    Mine says "NOrth African" instead of "Berber".
    Need to check.
    Bring back the stocks!

  6. #1066
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    Quote Originally Posted by Frederick View Post
    Berber....
    Has Polako updated the file?
    Mine says "NOrth African" instead of "Berber".
    Need to check.
    Mine says Berber so he might have updated.

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    Never meant to be here Frederick's Avatar
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    Quote Originally Posted by Barreldriver View Post
    Mine says Berber so he might have updated.
    Yes he did. I just checked.
    But I get absolute identical values (except tht "North African" is now named "Berber"). At least at the normal run. (havnt checked if its still the case if that Eastern European (Russian) and Volga-Ural (Chuvash) cluster are removed.
    Bring back the stocks!

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    Quote Originally Posted by Quasimodem View Post
    [/B]By the way, could some of you do a K=12 (without Volga-Ural and Northeast Euro)? I'm curious to see how those results compare with this. Here are mine:

    0.00% Sub-Saharan
    0.00% Berber
    2.87% South_Asian
    66.87% West_Euro
    0.02% Southeast_Asian
    0.77% South_Siberian
    1.56% North_Asian
    1.74% East_Siberian
    0.00% East_Asian
    8.39% East_Mediterranean
    3.55% Middle_Eastern
    14.23% West_Asian

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    I got bored, so I ran the raw data of my sister and brother-in-law:

    Sister:
    ----------------------------
    FINAL ADMIXTURE PROPORTIONS:
    ----------------------------

    29.70% Northeast_Euro
    0.00% Sub-Saharan
    0.12% N. African
    0.90% South_Asian
    58.86% West_Euro
    0.00% Southeast_Asian
    0.00% South_Siberian
    0.00% North_Asian
    0.00% East_Siberian
    0.00% East_Asian
    2.12% East_Mediterranean
    0.57% Middle_Eastern
    6.13% West_Asian
    1.60% Volga-Ural


    Brother-in-law:
    ----------------------------
    FINAL ADMIXTURE PROPORTIONS:
    ----------------------------

    30.32% Northeast_Euro
    0.19% Sub-Saharan
    0.00% N. African
    1.31% South_Asian
    54.84% West_Euro
    0.00% Southeast_Asian
    0.01% South_Siberian
    0.00% North_Asian
    0.16% East_Siberian
    0.02% East_Asian
    4.79% East_Mediterranean
    1.18% Middle_Eastern
    5.19% West_Asian
    1.97% Volga-Ural

  10. #1070
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    NO1 - West Norwegian
    NO2 - Me
    NO3 - East Norwegian

    West_Euro

    NO1 - 56.33%
    NO2 - 54.94%
    NO3 - 57.08%

    Northeast_Euro

    NO1 - 34.36%
    NO2 - 33.24%
    NO3 - 31.36%

    West_Asian

    NO1 - 4.37%
    NO2 - 5.09%
    NO3 - 4.78%

    Volga-Ural

    NO1 - 3.23%
    NO2 - 5.84%
    NO3 - 4.97%

    East_Siberian

    NO1 - 0.00%
    NO2 - 0.27%
    NO3 - 0.94%

    Middle_Eastern

    NO1 - 0.25%
    NO2 - 0.00%
    NO3 - 0.64%

    East_Mediterranean

    NO1 - 0.59%
    NO2 - 0.00%
    NO3 - 0.01%

    Southeast_Asian

    NO1 - 0.57%
    NO2 - 0.00%
    NO3 - 0.00%

    North_Asian

    NO1 - 0.00%
    NO2 - 0.51%
    NO3 - 0.01%

    South_Asian

    NO1 - 0.19%
    NO2 - 0.02%
    NO3 - 0.01%

    South Siberian

    NO1 - 0.00%
    NO2 - 0.00%
    NO3 - 0.20%

    East_Asian

    NO1 - 0.00%
    NO2 - 0.09%
    NO3 - 0.00%

    Sub-Saharan

    NO1 - 0.09%
    NO2 - 0.00%
    NO3 - 0.00%
    Last edited by Pallantides; 09-16-2011 at 11:36 AM. Reason: To fix a mistake

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