Plink version = ca. 689,900 SNPs
My VCF version = ca. 1,619,600 SNPs
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Plink version = ca. 689,900 SNPs
My VCF version = ca. 1,619,600 SNPs
it works.Quote:
Originally Posted by Peterski
OK later I will upload more of them. It works with Y and X or without?Quote:
Originally Posted by vbnetkhio
Here is without - https://www.sendspace.com/file/6zo9jf
how many can you get out of these Serbian samples?Quote:
Originally Posted by Peterski
https://www.ebi.ac.uk/ena/browser/view/PRJEB42044
I got only around 16,000. They are in gchr38.
Vbnetkhio, where did you find the info which sample is from which Oblast?
I have the following samples extracted from VCF (I will post their K15/K13):
And these samples are in array.zip (they have fewer SNPs, worse distances):Code:EG600001_big
EG600002_big
EG600003_big
EG600004_big
EG600005_big
EG600006_big
EG600007_big
EG600008_big
EG600009_big
EG600010_big
EG600011_big
EG600012_big
EG600013_big
EG600014_big
EG600015_big
EG600016_big
EG600017_big
EG600018_big
EG600019_big
EG600020_big
EG600021_big
EG600022_big
EG600023_big
EG600024_big
EG600025_big
EG600026_big
EG600027_big
EG600028_big
EG600029_big
EG600030_big
EG600031_big
EG600032_big
EG600033_big
EG600034_big
EG600035_big
EG600036_big
EG600037_big
EG600038_big
EG600039_big
EG600040_big
EG600041_big
EG600042_big
EG600043_big
EG600044_big
EG600045_big
EG600046_big
EG600047_big
EG600048_big
EG600049_big
EG600050_big
EG600051_big
EG600052_big
EG600053_big
EG600054_big
EG600055_big
EG600056_big
EG600057_big
EG600059_big
EG600060_big
EG600061_big
EG600062_big
EG600063_big
EG600064_big
EG600065_big
EG600066_big
EG600067_big
EG600068_big
EG600069_big
EG600070_big
EG600071_big
EG600072_big
EG600073_big
EG600074_big
EG600075_big
EG600076_big
EG600077_big
EG600078_big
EG600079_big
EG600080_big
EG600081_big
EG600082_big
EG600083_big
EG600084_big
EG600085_big
EG600086_big
EG600087_big
EG600088_big
EG600089_big
EG600090_big
EG600091_big
EG600092_big
EG600093_big
EG600094_big
EG600095_big
EG600096_big
EG600097_big
EG600098_big
I will post K15, K12b and K13 results for both versions of files (plink and my VCF), so you can compare.Code:EG600002
EG600003
EG600004
EG600005
EG600006
EG600007
EG600008
EG600009
EG600010
EG600011
EG600012
EG600013
EG600014
EG600015
EG600016
EG600017
EG600018
EG600019
EG600020
EG600021
EG600022
EG600023
EG600024
EG600025
EG600026
EG600027
EG600028
EG600029
EG600030
EG600031
EG600032
EG600033
EG600034
EG600036
EG600037
EG600039
EG600040
EG600041
EG600042
EG600043
EG600044
EG600045
EG600046
EG600047
EG600048
EG600049
EG600050
EG600051
EG600052
EG600053
EG600054
EG600056
EG600057
EG600060
EG600061
EG600063
EG600065
EG600066
EG600067
EG600068
EG600069
EG600070
EG600071
EG600073
EG600074
EG600075
EG600076
EG600077
EG600078
EG600079
EG600081
EG600082
EG600084
EG600085
EG600087
EG600088
EG600089
EG600090
EG600091
EG600092
EG600093
EG600094
EG600095
EG600096
EG600097
EG600098
QC_sample(EUR)
But I can already see that files extracted from VCF (= more SNPs) have better distances to populations.
I need to download every sample separately, or is there a combined VCF file with all samples (like in case of these Ukrainians)?Quote:
Originally Posted by vbnetkhio
there's actually only one combined vcf, but the link is listed next to each sample.Quote:
Originally Posted by Peterski
so you can just tick the first vcf on the list and click donwload, you'll get the whole dataset.
Oh well. xD Ok, downloading it now.Quote:
Originally Posted by vbnetkhio
there's a file with xy coordinates and smd555 checked where they land on the map.Quote:
Originally Posted by Peterski
EG600001 is there, scroll down to Zakarpatska_Rahiv
will you also post the k13 of Reich(Balanovsky) and Pagani Ukrainians?
VCF version Ukrainians (I called this version "_big"), Eurogenes K15:
Top 5 distances for each sample:Code:EG600001_big,17.88,21.81,18.58,17.11,8.01,7.05,6.88,0.71,0,0.96,0.20,0,0,0.79,0
EG600002_big,18.89,13.04,23.47,17.52,9.21,7.35,7.42,1.08,0.24,0,0.88,0,0.01,0.55,0.35
EG600003_big,15.85,15.23,25.63,19.31,7.54,9.50,4.93,0,0.60,0,0,0.92,0.49,0,0
EG600004_big,16.96,18.15,21.38,14.36,9.40,3.99,12.58,0.89,0.15,0.77,0.77,0,0.60,0,0
EG600005_big,17.49,19.04,22.97,18.41,8.21,7.14,4.02,1.84,0,0,0,0.01,0.35,0.53,0
EG600006_big,18.49,19.14,26.16,19.26,8.01,3.43,3.44,0,1.07,0.31,0.55,0,0.14,0,0
EG600007_big,20.33,14.42,22.07,15.63,9.38,7.17,8.56,1.41,0.50,0,0.54,0,0,0,0
EG600008_big,19.48,12.29,21.02,13.55,13.12,5.88,9.24,1.13,1.52,0,1.72,0.71,0,0,0.32
EG600009_big,17.13,18.65,24.59,15.88,9.41,5.65,5.45,1.96,0.16,0.27,0.09,0.77,0,0,0
EG600010_big,17.29,15.13,23.70,15.03,9.76,6.44,9.56,0,2.20,0,0,0.72,0,0.18,0
EG600011_big,21.31,12.63,21.31,13.67,13.06,9.71,6.34,0,0,0.41,1.34,0,0.12,0,0.09
EG600012_big,20.68,18.40,22.19,19.47,6.40,7.62,2.97,1.45,0,0,0.02,0.28,0.42,0,0.11
EG600013_big,20.06,17.01,27.79,15.66,6.82,6.76,4.45,0,0.87,0,0,0,0.51,0,0.07
EG600014_big,17.65,21.47,28.26,12.81,5.71,8.49,2.71,1.49,0.29,0,1.12,0,0,0,0
EG600015_big,16.67,16.19,31.42,17.16,6.90,3.29,3.67,0.30,1.79,0.71,0,0.96,0.94,0,0
EG600016_big,15.91,18.64,28.14,17.74,7.12,9.01,0,0,2.22,0,0.05,0.94,0,0.23,0
EG600017_big,18.15,15.36,28.85,23.81,5.86,6.18,0,0,0,0.35,0,0.60,0.85,0,0
EG600018_big,16.33,19.80,22.73,17.37,8.69,7.41,5.14,1.23,0.03,0.55,0.17,0,0.48,0,0.06
EG600019_big,19.54,14.45,20.02,15.58,1.60,11.02,5.83,0.41,0.58,2.34,8.04,0.35,0,0,0.22
EG600020_big,14.77,14.06,27.33,19.90,10.42,5.22,3.43,2.47,1.39,0.74,0,0.20,0.01,0.06,0
EG600021_big,11.09,20.15,31.22,24.81,6.34,5.55,0,0.07,0,0.40,0,0,0.36,0,0
EG600022_big,19.00,13.57,27.75,20.68,8.66,2.02,5.69,0,2.12,0,0,0,0.07,0,0.44
EG600023_big,18.53,18.20,28.53,18.54,7.41,6.16,0.49,0.82,0.34,0,0.42,0.07,0.14,0,0.35
EG600024_big,22.30,18.24,24.79,16.05,6.23,7.01,1.77,0.51,0.99,0,0.57,0.90,0,0.64,0
EG600025_big,14.06,21.93,27.76,22.99,3.95,6.73,1.32,0.38,0.74,0,0,0.14,0,0,0
EG600026_big,19.58,15.10,28.66,20.58,6.51,1.58,4.66,0.50,0.38,0,0.44,0.80,0.30,0,0.89
EG600027_big,21.20,16.05,25.04,11.46,9.39,8.43,6.44,0,0.06,0,0.22,1.70,0,0,0
EG600028_big,19.59,13.56,31.32,19.74,6.08,5.67,2.52,0,0.49,0,1.00,0,0.05,0,0
EG600029_big,19.40,12.39,31.13,19.43,5.82,4.43,1.62,1.45,0.11,1.71,2.51,0,0,0,0
EG600030_big,23.88,12.90,23.19,18.47,10.93,4.39,4.54,0,0.86,0,0,0.75,0.10,0,0
EG600031_big,17.87,17.72,25.42,21.33,5.80,2.64,7.20,0,0.30,0,0,0.29,0.89,0.54,0
EG600032_big,17.82,16.01,23.14,16.09,8.95,9.24,4.62,1.59,1.31,0,0.07,1.17,0,0,0
EG600033_big,14.20,22.64,28.10,15.96,7.07,3.73,6.16,1.69,0.35,0,0.08,0,0,0,0
EG600034_big,24.85,9.85,24.15,18.49,8.22,4.20,7.44,0.59,0,0.75,1.35,0,0.11,0,0
EG600035_big,19.63,18.75,17.20,15.92,10.91,9.22,4.56,2.13,0,0.75,0.19,0.64,0.09,0,0
EG600036_big,20.13,18.81,24.54,14.50,7.47,6.01,5.00,0,0.93,0,1.95,0.37,0,0.03,0.25
EG600037_big,17.85,16.91,32.00,20.94,6.52,0.41,1.70,0,0,0.13,0.80,1.03,0.58,0.36,0.77
EG600038_big,22.05,11.26,28.86,20.85,7.20,5.98,2.24,0.40,0.46,0,0,0,0.70,0,0
EG600039_big,21.70,16.03,27.14,22.48,3.13,4.84,1.81,0,0.03,0,0.50,0.54,0.56,0,1.24
EG600040_big,20.77,15.56,30.11,22.90,4.73,3.37,0.16,0,0.51,0,0.55,0.27,0.23,0,0.85
EG600041_big,18.75,18.24,31.65,19.27,5.74,2.63,0.92,1.01,0.72,0,0.50,0.01,0.30,0.25,0
EG600042_big,22.56,15.62,24.17,22.36,7.50,3.15,2.62,0.48,0.05,0,0,0.84,0.13,0.52,0
EG600043_big,19.77,15.90,26.51,18.14,9.29,3.66,3.99,0,0.26,0,0.48,0.87,0.29,0.57,0.27
EG600044_big,17.11,17.04,29.09,23.22,7.32,1.87,1.75,0.11,0,0,0,0.72,1.22,0.57,0
EG600045_big,20.59,16.03,30.72,17.06,3.98,8.46,1.46,0,0,0,0,0.33,1.10,0,0.27
EG600046_big,18.77,13.15,27.94,20.88,6.46,2.58,6.62,0.95,0.88,1.04,0,0.03,0.14,0.56,0
EG600047_big,13.42,18.70,29.94,18.68,8.44,6.97,2.49,0,0,0,0.04,1.17,0,0.14,0
EG600048_big,12.51,10.67,7.72,5.54,15.60,12.62,25.77,6.40,0,0.38,0,0,0.95,1.40,0.45
EG600049_big,17.97,21.46,29.74,19.93,4.97,2.60,2.90,0.14,0.25,0,0,0.01,0,0,0.05
EG600050_big,18.64,17.46,27.67,19.71,6.44,5.81,1.17,0.42,1.30,0,0,0.07,0.22,0,1.09
EG600051_big,22.18,9.97,27.75,18.83,10.03,2.29,4.88,0,3.20,0,0,0,0.87,0,0
EG600052_big,21.98,9.72,33.00,21.97,4.68,3.83,2.80,0.19,0.42,0,0,0.48,0.59,0,0.34
EG600053_big,18.93,16.44,26.62,19.75,8.77,4.88,2.93,0.72,0,0,0.35,0,0,0.61,0
EG600054_big,21.69,13.05,29.84,20.62,3.94,5.69,2.89,0.53,0.93,0.75,0.06,0,0,0,0
EG600055_big,23.19,10.76,30.28,22.59,5.25,1.95,5.10,0,0,0,0,0,0,0.87,0
EG600056_big,18.82,15.17,31.75,20.51,3.63,6.39,2.33,0.31,0.12,0,0,0.27,0.71,0,0
EG600057_big,22.46,11.48,29.99,21.74,5.23,2.13,2.41,2.41,0.64,0.36,0,0.73,0.42,0,0
EG600059_big,15.76,16.81,32.11,16.89,7.91,3.84,4.11,0,0.50,0,0.95,0.01,1.12,0,0
EG600060_big,24.30,11.32,30.96,18.51,6.09,4.76,0.79,1.01,0.84,0.36,0,0,0.35,0.38,0.32
EG600061_big,19.29,18.19,24.24,17.93,7.14,8.02,3.06,0.59,0,0,0,0.35,0.22,0.95,0
EG600062_big,24.04,12.65,27.66,14.42,7.94,6.35,3.27,1.38,2.10,0,0,0.05,0,0.14,0
EG600063_big,20.22,15.52,32.46,17.31,5.91,5.72,1.11,0.95,0,0,0,0.13,0.67,0,0
EG600064_big,20.83,17.36,26.52,16.24,9.00,2.88,2.19,2.49,0.06,0,1.99,0.31,0,0.13,0.02
EG600065_big,24.53,9.76,27.87,19.28,9.96,3.01,1.64,0.17,1.68,0,0.72,0,0.48,0,0.89
EG600066_big,20.82,12.52,29.63,21.01,5.82,5.63,0.97,0.52,0.93,0.12,1.52,0.51,0,0,0
EG600067_big,19.81,14.84,31.98,25.08,3.27,2.55,0,0.18,0.61,0.32,0.48,0,0,0.84,0.03
EG600068_big,15.82,18.49,32.93,22.24,4.03,4.25,0.81,0.27,0,0,0.21,0,0.45,0,0.49
EG600069_big,22.06,15.60,29.99,20.55,4.63,2.58,3.01,0.32,0,0.46,0,0.54,0.28,0,0
EG600070_big,13.84,16.94,30.04,22.87,5.26,4.04,2.87,0.29,1.19,0.46,0.77,0.82,0.41,0.19,0
EG600071_big,19.89,15.45,28.39,19.94,6.63,4.54,0.98,1.49,0,0,1.46,1.23,0,0,0
EG600072_big,20.02,17.75,26.38,18.74,8.67,4.58,0,0.84,0,0.26,1.46,0.33,0.63,0.34,0
EG600073_big,23.15,11.08,23.70,21.57,5.50,5.00,1.85,2.21,0.41,0.90,4.25,0.21,0,0.18,0
EG600074_big,21.31,15.22,28.11,18.74,6.97,4.53,0.62,0,1.90,0,0.60,0.68,1.09,0,0.24
EG600075_big,23.30,9.95,31.10,24.76,3.77,4.10,0.16,1.31,1.50,0,0,0.05,0,0,0
EG600076_big,21.33,15.28,23.36,16.96,7.29,7.48,4.64,2.16,0,0,0.49,0,0.99,0,0.03
EG600077_big,17.23,18.19,30.88,19.47,5.99,4.64,1.07,0,0,0,0.41,0.60,1.24,0.29,0
EG600078_big,17.43,18.11,31.77,15.97,7.05,0.65,3.23,1.28,2.57,1.41,0,0,0.52,0,0
EG600079_big,18.68,15.49,31.82,18.64,3.56,2.97,6.79,0,0,0,0.29,1.30,0.09,0.37,0
EG600080_big,16.26,18.33,30.17,19.66,5.67,5.88,2.50,0.15,0.25,0.27,0,0.85,0,0,0
EG600081_big,18.85,18.17,30.21,18.83,3.09,2.67,3.56,1.31,2.22,0,0,0,0.34,0.46,0.28
EG600082_big,22.92,16.49,27.97,18.59,4.49,0.88,5.68,0.63,0.03,0,0.03,1.68,0.07,0,0.55
EG600083_big,19.14,16.59,28.44,18.63,7.27,0.95,6.03,0,1.29,0.20,0.95,0.32,0,0,0.20
EG600084_big,17.20,17.36,31.38,21.57,4.77,4.86,0,0.50,1.29,0,0.01,0,0.69,0.09,0.27
EG600085_big,17.31,17.61,28.21,24.19,4.74,5.99,0,0,0.68,1.03,0,0,0.24,0,0
EG600086_big,18.19,15.96,29.97,19.56,4.96,8.14,0.62,0.83,1.18,0,0,0,0,0,0.59
EG600087_big,16.38,16.85,28.81,20.78,5.63,4.33,4.14,0.18,0.36,0,2.16,0.39,0,0,0
EG600088_big,21.33,16.96,31.21,18.63,4.82,3.58,2.01,0,0,0.15,0.48,0.49,0,0.19,0.16
EG600089_big,21.28,15.67,24.00,15.70,8.51,6.04,5.20,0.41,1.70,0.69,0.58,0.02,0.18,0,0
EG600090_big,23.60,11.48,21.70,20.23,6.80,7.47,6.22,1.15,0.62,0,0,0.73,0,0,0
EG600091_big,16.20,14.16,29.33,22.91,5.31,4.68,3.71,0.64,0,0.75,0.71,0,0.39,0,1.21
EG600092_big,24.29,13.37,22.50,20.88,6.52,6.35,1.73,0,3.78,0,0,0.13,0.45,0,0
EG600093_big,11.84,16.09,18.59,15.55,6.15,11.74,13.21,1.50,2.95,0,1.22,0.12,0.36,0,0.69
EG600094_big,23.69,10.40,27.91,22.35,8.14,3.80,0.86,0,1.86,0,0.67,0.32,0,0,0
EG600095_big,21.79,16.56,25.25,17.20,7.92,3.30,5.79,0.49,0.99,0.36,0.35,0,0,0,0
EG600096_big,22.14,13.80,22.29,18.09,8.96,5.24,6.06,0.33,0.44,0.53,0.76,0.71,0.41,0,0.25
EG600097_big,20.82,7.55,23.52,18.87,10.77,6.19,4.95,3.44,3.51,0,0.18,0,0.19,0,0
EG600098_big,18.57,18.26,31.17,18.40,2.54,6.39,2.23,0,1.05,0,0,0.20,0.69,0.48,0.01
Distance to: EG600098_big
3.83031330 Russian_Smolensk
5.25450283 Belorussian
5.33928834 Ukrainian_Kiev_Avg
5.46762288 Ukrainian_Belgorod
5.66639215 Southwest_Russian
Distance to: EG600097_big
9.01164247 Moldavian
9.39529670 Ukrainian_Lviv
10.49275913 Slovak
10.56028586 Croat_Bosnia
11.59686596 Croatian
Distance to: EG600096_big
4.25416468 Slovak
6.32281583 Ukrainian_Lviv
6.46460362 Moldavian
6.48275404 Croatian
7.06387288 South_Polish
Distance to: EG600095_big
3.97267419 Slovak
4.15352862 South_Polish
4.42232970 Sorb_Lusatia
4.79356861 Ukrainian_Lviv
6.38537391 Croatian
Distance to: EG600094_big
7.35834900 Masurian
7.55655345 Ukrainian_Lviv
7.78606447 Ukraine_East
8.55949181 Ukrainian_Kiev_Avg
8.70622766 South_Polish
Distance to: EG600093_big
8.17957212 Romania_Ne
9.25329671 Bosniak
9.67255444 Bosnian
9.73480354 Romania_Nw
10.11895251 Romanian
Distance to: EG600092_big
7.84500478 Ukrainian_Lviv
7.88307047 South_Polish
7.89430575 Slovak
8.30424590 Masurian
8.61744742 Sorb_Lusatia
Distance to: EG600091_big
3.64691651 Ukrainian_Belgorod
3.74714558 Southwest_Russian
5.07000000 Ukrainian_Kiev_Avg
5.44165416 Ukraine_East
5.71781427 Russian_Smolensk
Distance to: EG600090_big
7.67821305 Slovak
8.36285238 Ukrainian_Lviv
8.72959335 Moldavian
9.33582348 South_Polish
9.57191661 Croat_Bosnia
Distance to: EG600089_big
3.29688925 Slovak
4.53177669 Croatian
4.96748427 Ukrainian_Lviv
5.34275210 South_Polish
5.77097512 Slovenian
Distance to: EG600088_big
4.03003722 Ukrainian_Kiev_Avg
4.07035625 Belorussian
4.10394932 Polish
4.42288367 Russian_Smolensk
5.00860260 South_Polish
Distance to: EG600087_big
3.96700139 Russian_Smolensk
4.10411988 Ukrainian_Kiev_Avg
4.44803327 Southwest_Russian
4.76068272 Ukrainian_Belgorod
5.90502329 Estonian_Polish
Distance to: EG600086_big
4.08944984 Ukrainian_Belgorod
4.34441020 Ukrainian_Kiev_Avg
4.78002092 Russian_Smolensk
5.28413664 Southwest_Russian
6.61756753 South_Polish
Distance to: EG600085_big
4.71204839 Ukrainian_Belgorod
4.77062889 Southwest_Russian
5.16937134 Russian_Smolensk
5.60151765 Estonian_Polish
6.70609424 Ukrainian_Kiev_Avg
Distance to: EG600084_big
3.16020569 Russian_Smolensk
3.48584280 Estonian_Polish
4.13639940 Belorussian
4.37346545 Southwest_Russian
4.48563262 Ukrainian_Belgorod
Distance to: EG600083_big
5.65131843 Ukrainian_Kiev_Avg
6.05999175 South_Polish
6.51544319 Polish
6.81912751 Russian_Smolensk
6.92893931 Ukrainian_Lviv
Distance to: EG600082_big
5.71604759 Polish
5.80984509 Sorb_Lusatia
5.96968173 South_Polish
6.83062223 Ukrainian_Lviv
6.88973149 Masurian
Distance to: EG600081_big
3.59773540 Russian_Smolensk
4.04346386 Belorussian
5.06635964 Ukrainian_Kiev_Avg
5.21184228 Estonian_Polish
5.42339377 Polish
Distance to: EG600080_big
3.00577777 Russian_Smolensk
4.17763091 Ukrainian_Kiev_Avg
4.97199155 Ukrainian_Belgorod
5.36607864 Southwest_Russian
5.84545122 Estonian_Polish
Distance to: EG600079_big
5.91345077 Ukrainian_Kiev_Avg
6.29138300 Belorussian
6.50261486 Russian_Smolensk
6.52111187 Southwest_Russian
7.03142944 Ukrainian_Belgorod
Distance to: EG600078_big
6.92465162 Ukrainian_Kiev_Avg
7.15904323 Russian_Smolensk
7.55314504 Belorussian
7.99719326 Estonian_Polish
8.15583227 Polish
Distance to: EG600077_big
2.89987931 Russian_Smolensk
3.93761349 Ukrainian_Kiev_Avg
4.77090138 Estonian_Polish
4.86349668 Belorussian
5.48982696 Southwest_Russian
Distance to: EG600076_big
4.62517628 Slovak
5.44508953 Ukrainian_Lviv
5.56222078 Croatian
5.66784792 South_Polish
6.39958592 Kaykavian_Croatian
Distance to: EG600075_big
7.69822057 Ukraine_East
8.33800336 Southwest_Russian
8.74849701 Ukrainian_Belgorod
9.54535940 Latvian
9.57607957 Estonian
Distance to: EG600074_big
3.60625845 South_Polish
4.12053395 Ukrainian_Kiev_Avg
4.18948684 Ukrainian_Lviv
4.75020000 Polish
5.58537376 Masurian
Distance to: EG600073_big
7.16312111 RU_Pinega
8.21604528 Ukrainian_Lviv
8.81365985 East_Finnish
9.07846903 Masurian
9.07851309 Kargopol_Russian
Distance to: EG600072_big
4.22677182 South_Polish
4.99220392 Polish
5.63500665 Ukrainian_Kiev_Avg
6.17043759 Ukrainian_Lviv
6.32321121 Sorb_Lusatia
Distance to: EG600071_big
2.93388821 Ukrainian_Kiev_Avg
4.30146487 South_Polish
4.61214701 Polish
4.81676240 Russian_Smolensk
5.04643438 Southwest_Russian
Distance to: EG600070_big
5.25498811 Russian_Smolensk
5.34497895 Southwest_Russian
5.45797582 Ukrainian_Belgorod
5.68774999 Estonian_Polish
6.47770021 Ukrainian_Kiev_Avg
Distance to: EG600069_big
4.16001202 Polish
4.48993318 Belorussian
4.54923070 Ukrainian_Kiev_Avg
4.99468718 Southwest_Russian
5.29446881 South_Polish
Distance to: EG600068_big
4.06633742 Estonian_Polish
4.47605853 Russian_Smolensk
4.50499723 Belorussian
5.65234465 Southwest_Russian
5.97503975 Ukrainian_Belgorod
Distance to: EG600067_big
4.62552700 Estonian_Polish
5.18735000 Southwest_Russian
5.21375105 Belorussian
5.29300482 Ukraine_East
6.16530616 Lithuanian
Distance to: EG600066_big
4.63138208 Ukrainian_Kiev_Avg
5.05952567 Ukrainian_Belgorod
5.06524432 Southwest_Russian
5.23199771 Ukraine_East
6.16359473 Ukrainian_Lviv
Distance to: EG600065_big
6.68943944 Ukrainian_Lviv
7.60764090 Masurian
8.93652617 South_Polish
9.45659446 Slovak
9.49360838 Ukrainian_Kiev_Avg
Distance to: EG600064_big
4.52059731 South_Polish
5.10030391 Ukrainian_Lviv
5.60572921 Sorb_Lusatia
6.12929849 Polish
6.13119027 Slovak
Distance to: EG600063_big
4.25207008 Ukrainian_Kiev_Avg
5.83355809 Russian_Smolensk
6.23173331 Belorussian
6.29406069 South_Polish
6.48972264 Ukrainian_Lviv
Distance to: EG600062_big
3.82691782 Ukrainian_Lviv
6.25301172 Slovak
6.66709832 South_Polish
8.06984510 Sorb_Lusatia
8.53842491 Ukrainian_Kiev_Avg
Distance to: EG600061_big
5.15220341 South_Polish
5.82101366 Croatian
6.41039780 Kaykavian_Croatian
6.87140451 Sorb_Lusatia
7.02268863 Slovak
Distance to: EG600060_big
6.02292288 Ukrainian_Lviv
7.36043477 Masurian
7.38558055 Ukrainian_Kiev_Avg
7.71880172 South_Polish
8.08614247 Ukraine_East
Distance to: EG600059_big
5.52602932 Ukrainian_Kiev_Avg
6.55476163 Russian_Smolensk
7.84176638 Ukraine_East
7.89441575 Belorussian
8.25656708 Estonian_Polish
Distance to: EG600057_big
6.17658482 Ukraine_East
6.82200117 Ukrainian_Kiev_Avg
6.90284724 Southwest_Russian
7.31721942 Ukrainian_Lviv
7.47801444 Masurian
Distance to: EG600056_big
2.99000000 Ukrainian_Belgorod
3.47824668 Southwest_Russian
4.06388976 Ukrainian_Kiev_Avg
4.35753371 Russian_Smolensk
4.83832616 Belorussian
Distance to: EG600055_big
7.68180317 Ukraine_East
8.04049750 Southwest_Russian
8.40998216 Ukrainian_Kiev_Avg
8.76704055 Ukrainian_Lviv
8.77793256 Ukrainian_Belgorod
Distance to: EG600054_big
4.68643788 Ukrainian_Belgorod
4.73053908 Southwest_Russian
4.86641552 Ukrainian_Kiev_Avg
6.17864063 Ukrainian_Lviv
6.29821403 South_Polish
Distance to: EG600053_big
3.99469648 South_Polish
4.22867592 Ukrainian_Kiev_Avg
5.55045043 Ukrainian_Lviv
5.59252179 Polish
6.04125815 Russian_Smolensk
Distance to: EG600052_big
6.36394532 Ukraine_East
7.71417526 Southwest_Russian
8.02837468 Ukrainian_Belgorod
8.12373682 Lithuanian
8.16148883 Ukrainian_Kiev_Avg
Distance to: EG600051_big
6.65563671 Ukrainian_Lviv
8.94955865 South_Polish
8.98209886 Ukrainian_Kiev_Avg
9.13459537 Slovak
9.30070965 Ukraine_East
Distance to: EG600050_big
3.59284010 Ukrainian_Kiev_Avg
3.88491956 Russian_Smolensk
4.22445263 South_Polish
4.72672191 Polish
5.22526554 Ukrainian_Belgorod
Distance to: EG600049_big
4.01295402 Russian_Smolensk
5.28139186 Belorussian
5.36869630 Polish
5.39197552 Estonian_Polish
6.58760199 Ukrainian_Kiev_Avg
Distance to: EG600048_big
3.83903634 Ashkenazi
5.88590690 Central_Greek
5.97789261 East_Sicilian
6.02607667 Sicily_Ragusa
6.53091877 Italy_Abruzzo
Distance to: EG600047_big
7.04738959 Russian_Smolensk
7.17069034 Ukrainian_Kiev_Avg
8.33868695 Ukrainian_Belgorod
9.04650209 Southwest_Russian
9.31041889 Estonian_Polish
Distance to: EG600046_big
5.78569788 Ukrainian_Kiev_Avg
6.65326236 Southwest_Russian
6.95682399 Ukrainian_Belgorod
7.11767518 Ukrainian_Lviv
7.21329328 Ukraine_East
Distance to: EG600045_big
5.63853704 Ukrainian_Kiev_Avg
6.42485798 South_Polish
6.53805782 Russian_Smolensk
6.54110082 Ukrainian_Belgorod
7.10888880 Ukrainian_Lviv
Distance to: EG600044_big
4.37698526 Estonian_Polish
5.31900367 Russian_Smolensk
5.44242593 Ukraine_East
5.65138036 Southwest_Russian
5.76616857 Ukrainian_Kiev_Avg
Distance to: EG600043_big
4.00029999 South_Polish
4.58212833 Ukrainian_Lviv
5.12239202 Ukrainian_Kiev_Avg
6.03205682 Slovak
6.19150224 Polish
Distance to: EG600042_big
5.66603036 Masurian
5.84770040 South_Polish
5.97749948 Polish
6.63680646 Sorb_Lusatia
7.16178050 Ukrainian_Lviv
Distance to: EG600041_big
3.31537328 Russian_Smolensk
3.36136877 Belorussian
3.64725924 Estonian_Polish
4.36483677 Ukrainian_Kiev_Avg
4.87926224 Polish
Distance to: EG600040_big
4.00303635 Estonian_Polish
4.01165801 Southwest_Russian
4.42583325 Belorussian
4.85370992 Ukraine_East
5.13613668 Ukrainian_Belgorod
Distance to: EG600039_big
4.46086315 Southwest_Russian
5.09844094 Polish
5.26110255 Ukrainian_Belgorod
5.93989899 Russian_Smolensk
6.11345238 Ukrainian_Kiev_Avg
Distance to: EG600038_big
5.55945141 Ukrainian_Lviv
5.96678305 Ukrainian_Kiev_Avg
6.83754342 Ukrainian_Belgorod
6.84431151 South_Polish
6.86489621 Ukraine_East
Distance to: EG600037_big
3.84546486 Estonian_Polish
4.45812741 Belorussian
4.94639262 Ukraine_East
5.40919587 Russian_Smolensk
5.71558396 Ukrainian_Kiev_Avg
Distance to: EG600036_big
4.81116410 Croatian
4.90708671 Kaykavian_Croatian
5.42873834 Czech
5.68966623 Slovak
5.73915097 Slovenian
Distance to: EG600035_big
6.22629103 Kaykavian_Croatian
6.32923680 Slovenian
6.77934363 Croatian
7.18797607 Austrian
7.55619613 Moldavian
Distance to: EG600034_big
7.69712545 Slovak
7.72224708 Ukrainian_Lviv
9.48298674 Croat_Bosnia
9.81788165 South_Polish
10.13038005 Moldavian
Distance to: EG600033_big
9.12747501 Russian_Smolensk
9.60599813 Croatian
10.01993513 Ukrainian_Kiev_Avg
10.37727324 South_Polish
10.76018123 Polish
Distance to: EG600032_big
3.91983418 Croatian
5.04352060 Moldavian
7.00758106 Slovenian
7.03440829 Kaykavian_Croatian
7.58104886 Slovak
Distance to: EG600031_big
7.40246581 Ukrainian_Kiev_Avg
7.41325839 Russian_Smolensk
7.46619046 South_Polish
7.67947264 Southwest_Russian
7.68417204 Polish
Distance to: EG600030_big
4.81588975 Slovak
6.38457516 Ukrainian_Lviv
7.62899076 South_Polish
8.04843075 Croat_Bosnia
8.17506575 Sorb_Lusatia
Distance to: EG600029_big
4.60633260 Ukrainian_Kiev_Avg
5.23639189 Ukraine_East
5.94922684 Southwest_Russian
6.05846515 Ukrainian_Belgorod
6.68283622 Ukrainian_Lviv
Distance to: EG600028_big
3.15792653 Ukrainian_Kiev_Avg
4.57003282 Ukrainian_Belgorod
4.82480051 Southwest_Russian
4.83073493 Ukraine_East
5.67952463 Russian_Smolensk
Distance to: EG600027_big
6.04216021 Croatian
6.04968213 Slovenian
6.81557041 Hungarian
6.85751650 Slovak
7.18654994 Moldavian
Distance to: EG600026_big
4.29903478 Ukrainian_Kiev_Avg
5.60828851 Polish
5.61326108 Southwest_Russian
5.74952172 South_Polish
5.84686241 Russian_Smolensk
Distance to: EG600025_big
6.89266277 Russian_Smolensk
8.26778084 Ukrainian_Belgorod
8.43601802 Estonian_Polish
8.49939410 Southwest_Russian
9.29875798 Belorussian
Distance to: EG600024_big
4.22021326 South_Polish
4.59090405 Sorb_Lusatia
5.59387593 Slovak
5.94101843 Ukrainian_Lviv
5.99662405 Czech
Distance to: EG600023_big
4.14319925 Ukrainian_Kiev_Avg
4.54809850 Russian_Smolensk
4.63834022 South_Polish
5.29564916 Polish
6.54217089 Ukrainian_Belgorod
Distance to: EG600022_big
6.00742041 Ukrainian_Kiev_Avg
6.84003655 Ukrainian_Lviv
6.88960086 Ukraine_East
7.04663040 South_Polish
7.72725695 Southwest_Russian
Distance to: EG600021_big
9.07016538 Estonian_Polish
9.12743666 Russian_Smolensk
9.84704524 Ukrainian_Belgorod
10.06236553 Southwest_Russian
10.48989990 Belorussian
Distance to: EG600020_big
6.83152252 Ukrainian_Kiev_Avg
8.41230052 Ukraine_East
8.48794439 Ukrainian_Belgorod
8.70967852 Ukrainian_Lviv
8.79228071 Russian_Smolensk
Distance to: EG600019_big
12.67282920 Moldavian
12.83446921 Tatar
13.09606811 Kaykavian_Croatian
13.46217664 Croatian
13.70588469 Szekely
Distance to: EG600018_big
4.40178373 Croatian
6.56035822 Kaykavian_Croatian
7.25955021 Slovenian
8.14100117 Moldavian
8.46682349 Bosniak
Distance to: EG600017_big
4.03208383 Ukrainian_Belgorod
4.25104693 Southwest_Russian
5.67445152 Ukrainian_Kiev_Avg
5.68546392 Russian_Smolensk
5.83337810 Ukraine_East
Distance to: EG600016_big
7.14372452 Russian_Smolensk
7.26258219 Ukrainian_Kiev_Avg
8.12844389 South_Polish
8.16701904 Ukrainian_Belgorod
9.11906245 Southwest_Russian
Distance to: EG600015_big
4.40954646 Ukrainian_Kiev_Avg
5.61075752 Russian_Smolensk
6.69175612 Ukraine_East
6.82361341 Belorussian
7.23361597 Estonian_Polish
Distance to: EG600014_big
9.01052718 South_Polish
9.46683685 Croatian
9.59831235 Russian_Smolensk
9.79606554 Ukrainian_Kiev_Avg
9.79795897 Kaykavian_Croatian
Distance to: EG600013_big
4.01848230 South_Polish
4.86882943 Ukrainian_Lviv
5.44882556 Ukrainian_Kiev_Avg
6.23474137 Sorb_Lusatia
6.68980179 Slovak
Distance to: EG600012_big
6.13360416 South_Polish
6.23343405 Kaykavian_Croatian
6.82969253 Sorb_Lusatia
7.08173123 Slovak
7.15447412 Croatian
Distance to: EG600011_big
4.76133385 Moldavian
5.88560001 Croat_Bosnia
7.14757600 Bosnian
7.43100725 Serbian_Bosnia
7.55638854 Slovenian
Distance to: EG600010_big
4.69513578 Bosniak
4.78956115 Bosnian
4.80746295 Croatian
5.05433477 Moldavian
5.17151513 Serbian_Bosnia
Distance to: EG600009_big
3.19197431 Croatian
6.25063258 Slovenian
6.58679740 Kaykavian_Croatian
7.17921305 South_Polish
7.51055258 Czech
Distance to: EG600008_big
4.72491270 Moldavian
4.86453685 Serbian_Bosnia
4.96281044 Croat_Bosnia
4.97403753 Bosnian
6.30644115 Bosniak
Distance to: EG600007_big
3.48101997 Moldavian
4.55889241 Croatian
4.99259639 Serbian_Bosnia
5.04786582 Bosnian
5.64496568 Croat_Bosnia
Distance to: EG600006_big
4.67655856 South_Polish
5.16202480 Polish
5.66705391 Ukrainian_Kiev_Avg
5.78427178 Russian_Smolensk
6.16473844 Sorb_Lusatia
Distance to: EG600005_big
4.88932511 Croatian
6.47041730 Kaykavian_Croatian
7.04199546 South_Polish
7.63297049 Slovenian
8.09840499 Slovak
Distance to: EG600004_big
5.14993871 Serbian_Bosnia
5.67309439 Bosniak
6.23415613 Bosnian
6.41809162 Romania_Nw
6.72119781 Romania_Ne
Distance to: EG600003_big
7.47450333 Croatian
7.49545863 Ukrainian_Kiev_Avg
7.68238244 Ukrainian_Belgorod
8.31385590 Moldavian
8.32867336 South_Polish
Distance to: EG600002_big
4.17910277 Moldavian
5.52553165 Croatian
7.11874727 Bosnian
7.21180759 Serbian_Bosnia
7.24001765 Slovak
Distance to: EG600001_big
5.29578134 Austrian
5.87778870 Kaykavian_Croatian
6.88409762 Croatian
7.36015782 Slovenian
8.71401744 Czech
Plink version ("_small"), Eurogenes K13:
Soon I will post also K13 for VCF version and K15 for plink version.Code:EG600002_small,16.59,41.12,15.78,9.92,10.90,1.13,1.06,0,1.75,0.32,0.69,0.75,0
EG600003_small,30.08,33.63,9.51,7.84,12.60,0,0.46,3.46,0.52,0,0.71,0,1.20
EG600004_small,25.09,37.43,12.75,2.53,17.34,0,0.36,1.87,2.63,0,0,0,0
EG600005_small,25.54,39.61,10.24,7.57,12.91,0.01,0,0.17,1.40,0,1.22,0,1.33
EG600006_small,29.47,43.40,10.83,1.71,11.32,0,0,0,3.04,0,0.23,0,0
EG600007_small,29.40,36.55,13.38,5.61,11.27,0.53,0,0,3.11,0,0.16,0,0
EG600008_small,26.35,28.09,19.22,8.31,10.31,0,5.23,1.20,0,1.30,0,0,0
EG600009_small,29.29,37.99,12.71,4.42,11.79,0,0.53,0.95,0,1.23,0,0,1.10
EG600010_small,22.98,35.34,13.37,7.75,13.98,0,5.03,0,0,0.74,0,0,0.80
EG600011_small,21.41,36.47,17.25,9.29,12.50,0,0,0.17,0,2.38,0.53,0,0
EG600012_small,26.46,39.32,11.89,3.15,13.45,1.02,3.09,0,0,1.24,0.38,0,0
EG600013_small,26.96,38.90,11.01,6.18,11.59,0.90,1.32,0,1.41,0,1.26,0,0.46
EG600014_small,28.51,41.63,10.08,7.72,6.79,0.08,0.73,0.12,2.77,0.62,0.11,0.83,0
EG600015_small,20.85,49.86,9.80,1.11,13.37,0,0.45,2.04,0,1.11,0.37,0,1.04
EG600016_small,29.80,40.01,13.68,10.82,0,0,1.88,0,0,1.09,0.94,0.81,0.96
EG600017_small,18.86,48.44,13.88,11.17,0.36,2.03,0,1.96,0,1.77,1.53,0,0
EG600018_small,21.46,40.22,15.18,11.88,4.07,2.06,0.21,0,2.36,0,0.54,1.81,0.21
EG600019_small,23.08,35.78,8.82,13.37,3.05,2.09,1.72,2.46,7.49,0.17,0,1.98,0
EG600020_small,22.36,41.96,14.40,4.38,10.19,0.04,5.90,0,0.67,0,0.11,0,0
EG600021_small,19.38,50.43,13.15,10.03,2.53,0,0,1.25,2.29,0,0.81,0,0.14
EG600022_small,22.47,42.15,15.69,3.99,10.24,0,3.22,0,0,0,0,0,2.25
EG600023_small,31.78,41.70,10.31,11.07,1.88,0,0.02,1.44,0,0.06,0.78,0,0.95
EG600024_small,21.19,40.64,13.20,11.59,6.70,0.63,2.50,0.03,0.37,2.27,0.88,0,0
EG600025_small,28.51,47.55,6.60,8.47,2.47,2.06,0.49,0.45,0,1.03,0.90,1.47,0
EG600026_small,26.07,44.09,13.85,7.61,3.81,0,0.76,0.95,0.63,1.12,1.13,0,0
EG600027_small,26.54,36.85,9.93,10.39,10.32,0,3.89,0.74,0,0.37,0.98,0,0
EG600028_small,33.17,45.55,5.41,9.24,2.27,0,0,1.46,1.80,0,0.06,1.05,0
EG600029_small,18.28,49.71,6.08,8.90,6.60,2.11,0,0.99,3.23,2.32,1.48,0.31,0
EG600030_small,30.10,36.58,14.80,5.18,8.53,0,3.31,0,0,0.71,0.78,0,0
EG600031_small,27.31,45.69,8.69,4.00,10.30,0,0,0.62,0.80,0.79,1.79,0,0
EG600032_small,24.48,39.24,14.39,9.77,5.18,2.46,2.24,0,1.19,0,1.05,0,0
EG600033_small,26.20,40.74,14.58,3.60,12.79,0,0,0.92,0.25,0,0.91,0,0
EG600034_small,16.89,45.05,13.40,5.38,13.27,0,0,2.70,3.14,0.17,0,0,0
EG600036_small,32.09,34.22,10.08,10.58,5.76,0,2.37,0.78,3.05,0,0,0.56,0.52
EG600037_small,29.71,46.58,11.28,3.61,2.19,0,0,0,1.95,0.68,2.61,1.40,0
EG600039_small,37.09,44.03,5.60,4.22,1.95,0,1.83,0,0.04,2.49,1.15,1.61,0
EG600040_small,24.17,50.33,11.70,4.32,3.61,0,2.85,1.16,0.66,0.64,0,0.58,0
EG600041_small,24.47,50.20,11.41,3.47,5.94,0.12,1.26,0,1.83,0.37,0.69,0.24,0
EG600042_small,29.51,41.47,12.19,9.03,3.69,0.61,1.94,0,0,1.56,0,0,0
EG600043_small,23.42,44.53,13.99,4.93,4.83,2.62,0.15,0.78,2.70,1.85,0,0.21,0
EG600044_small,29.29,43.81,7.84,5.94,8.69,0.02,0,0.95,0,0.82,1.69,0,0.95
EG600045_small,33.74,40.83,11.62,4.55,4.20,0,0.62,0.51,0.80,1.29,1.14,0.69,0
EG600046_small,21.73,45.17,9.24,3.01,13.23,0.65,3.09,2.16,0.57,0,0,1.15,0
EG600047_small,19.22,49.95,14.65,3.97,9.93,0,0,0,0.28,0.92,0.54,0.53,0
EG600048_small,13.61,10.58,21.40,13.74,34.07,2.68,0.25,0,0,0.03,1.70,1.38,0.56
EG600049_small,28.16,47.58,7.12,5.61,7.58,0,0.84,1.10,1.48,0,0,0,0.54
EG600050_small,25.45,47.00,10.44,9.21,4.01,0,1.20,0,2.15,0,0.03,0.53,0
EG600051_small,25.05,42.29,13.00,5.75,7.33,0,3.47,0.75,0,0.66,1.70,0,0
EG600052_small,19.68,54.57,8.79,4.02,10.43,0.10,0,0.32,0.46,0.70,0.94,0,0
EG600053_small,30.32,40.43,12.64,5.77,5.01,2.47,0,0.11,2.91,0,0,0.33,0
EG600054_small,29.67,43.62,4.80,11.26,6.54,0,1.13,1.05,1.62,0,0.32,0,0
EG600056_small,19.57,55.88,7.70,5.67,8.53,0,0,0,0.22,2.15,0.29,0,0
EG600057_small,21.54,50.58,11.59,2.63,7.25,1.89,1.83,0,0.94,0.63,1.08,0,0.03
EG600060_small,21.24,47.35,11.90,5.34,7.00,1.77,2.05,0,1.82,0,1.53,0,0
EG600061_small,25.48,42.80,11.03,8.70,8.57,0,0,0,0,0.90,0.43,0.56,1.52
EG600063_small,24.01,45.04,11.98,7.87,5.98,1.16,0.50,1.38,0,1.42,0.65,0,0
EG600065_small,27.60,45.92,12.07,4.31,3.22,0,2.83,0,0.81,0.92,0.79,1.02,0.50
EG600066_small,25.90,45.51,10.10,10.10,0.55,3.22,3.37,0,1.00,0.24,0,0,0
EG600067_small,27.44,51.76,7.23,5.25,0,0.18,2.81,0.97,2.54,0,0.20,1.62,0
EG600068_small,23.43,51.46,7.08,8.62,5.30,1.73,0,0.84,0,0.30,1.25,0,0
EG600069_small,26.72,48.39,11.66,5.25,3.66,1.26,0.05,1.07,0,1.67,0,0.26,0
EG600070_small,21.30,46.78,11.17,6.01,7.68,0.42,3.75,0,1.23,0,1.65,0,0
EG600071_small,19.93,47.17,11.84,9.19,6.37,0,0,0,2.96,1.78,0.42,0.34,0
EG600073_small,28.18,43.79,4.63,11.26,2.81,2.14,0,1.32,4.61,0.69,0,0.56,0
EG600074_small,31.38,40.71,12.77,1.97,5.09,1.07,2.92,0,3.00,0.75,0,0.33,0
EG600075_small,21.97,53.69,5.42,8.19,3.78,1.42,4.13,0,1.07,0,0,0.33,0
EG600076_small,26.01,32.18,13.44,12.87,10.33,3.17,0,0,0,0,1.99,0,0
EG600077_small,31.24,46.49,6.10,5.38,5.86,0.37,0,1.35,0,1.05,0.96,1.19,0
EG600078_small,28.42,42.85,9.84,0,7.79,4.00,0.66,0,3.45,0.71,1.76,0,0.52
EG600079_small,29.28,42.99,6.52,5.97,10.80,0.51,0.68,0,0.67,2.59,0,0,0
EG600081_small,29.98,42.78,7.45,4.00,4.89,1.98,6.18,0.51,0,0.33,1.45,0.46,0
EG600082_small,22.55,47.79,11.86,1.01,12.65,0,0,0,0,2.11,0.88,0.90,0.24
EG600084_small,21.74,51.79,6.92,8.01,5.26,3.08,0,0,0.96,0,1.60,0.20,0.45
EG600085_small,24.36,50.77,8.69,11.86,1.47,0,1.15,1.21,0,0,0.48,0,0
EG600087_small,21.63,48.89,8.39,6.74,8.33,1.32,2.39,0,1.29,0.59,0.44,0,0
EG600088_small,23.64,51.57,9.94,5.58,5.39,0,0,0.30,1.81,0.10,0,0.21,1.47
EG600089_small,34.25,33.34,10.64,9.29,7.42,0.87,0,0.30,2.97,0,0.92,0,0
EG600090_small,30.48,36.99,8.43,11.68,5.47,3.94,0.52,0,0.74,1.38,0.37,0,0
EG600091_small,20.97,45.53,12.61,10.77,3.62,0,0,0,3.32,0,2.21,0.45,0.52
EG600092_small,31.82,41.89,12.02,4.08,3.76,0,2.49,0,1.87,2.06,0,0,0
EG600093_small,21.12,28.20,13.10,15.78,10,2.62,5.57,0,0.58,1.48,1.50,0,0.05
EG600094_small,29.79,45.80,9.11,9.64,0,0,3.03,0,1.96,0.22,0,0.39,0.06
EG600095_small,26.02,40.91,10.73,6.22,10.19,2.41,0.61,0,2.85,0,0.06,0,0
EG600096_small,17.41,41.33,16.81,8.16,10.69,0,0,2.85,0.44,1.09,1.17,0,0.05
EG600097_small,23.04,36.52,17.37,9.46,6.88,1.74,3.30,0,0.44,0,1.00,0,0.25
EG600098_small,32.73,44.72,7.14,1.80,6.34,0.02,1.63,2.51,0.74,1.25,0.01,0,1.12
QC_sample(EUR)_small,54.79,25.93,5.23,6.23,3.73,0,2.19,0.12,0,0.05,0.28,1.45,0
Distance to: Polak
3.60458042 Ukraine_Zhytomyrska:Zhytomyr_district_Veresy_EG600 049
4.90249936 Ukraine_Zakarpatska:Mukachevo_EG600088
5.17196288 Ukraine_Sumska:EG600082_
5.32878973 Ukraine_Dnipropetrovska:EG600069_
5.76468559 Ukraine_Rivnenska:Volovymyrets_district_Velyki_Tse ptsevychi_EG600041_
5.80739184 Ukraine_Sumska:Krasnopillya_district_Ugroidy_EG600 081
5.99362161 Ukraine_Cherkaska:Zlotonosha_
6.44019410 Ukraine_Donetska:Gorlivka_EG600026
6.46733330 Ukraine_Zakarpatska:Uzhgorod_EG600098
6.66120109 Rivne_apricity
6.66235694 Ukraine_Sumska:Sumy_district_Solidarne_EG600078
6.67498315 Ukraine_Chernihivska:Kulykiv_district_Kovchyn_EG60 0060
6.71195948 Ukraine_Rivnenska:R1b8_
6.72328045 Ukraine_Rivnenska:Sarny_EG600039
6.72330276 Ukraine_Lvivska:EG600063_
6.75973372 Ukraine_Chernihivska:Ripky_district_Syberezh_EG600 055
6.91505604 Ukraine_Rivnenska:EG600044_
6.99494103 Ukraine_Sumska:EG600079_
7.00460563 Ukraine_Sumska:Lebedyn_district_Kaminne_EG600077
7.03675351 Ukraine_Rivnenska:Korets_district_Ustya_EG600040
7.05922092 Ukraine_Krym:Krasnoperekopsk_EG600031
7.14483730 Ukraine_Sumska:Krasnopillya_district_Porozok_EG600 083
7.14632073 Ukraine_Sumska:R1a1c_
7.16788672 Ukraine_Lvivska:Skole_district_Nyzhne_Synevydne_EG 60006_
7.20944519 Ukraine_Zaporizka:r1a1d_
My family is from around Galicia, Volhynia, and Podolia.
Add please those Ukrainians to K13 updated sheet on vahaduo website and check with all samples.Quote:
Originally Posted by Polak
And how many did you get from these Ukrainian VCF files ???Quote:
Originally Posted by vbnetkhio
lol, they are nothing alike. these 2 are the same sample:Quote:
Originally Posted by Peterski
EG600002_small,16.59,41.12,15.78,9.92,10.90,1.13,1 .06,0,1.75,0.32,0.69,0.75,0
24.00% North_Atlantic
37.91% Baltic
12.91% West_Med
8.54% West_Asian
11.47% East_Med
1.24% Red_Sea
0.88% South_Asian
0.03% East_Asian
1.94% Siberian
0.00% Amerindian
0.20% Oceanian
0.45% Northeast_African
0.44% Sub-Saharan
I noticed the same when I checked by myself plink and vcf version although in K36.Quote:
Originally Posted by vbnetkhio
I extracted the commercial company snps (million and something), and most of them were there.Quote:
Originally Posted by Peterski
0.969273 genotype rate in k13
Distance to: PolakQuote:
Originally Posted by Lucas
3.60458042 Ukraine_Zhytomyrska:Zhytomyr_district_Veresy_EG600 049
4.90249936 Ukraine_Zakarpatska:Mukachevo_EG600088
5.17196288 Ukraine_Sumska:EG600082_
5.32878973 Ukraine_Dnipropetrovska:EG600069_
5.35520308 Belorussian
5.76468559 Ukraine_Rivnenska:Volovymyrets_district_Velyki_Tse ptsevychi_EG600041_
5.80739184 Ukraine_Sumska:Krasnopillya_district_Ugroidy_EG600 081
5.95423379 Polish
5.99362161 Ukraine_Cherkaska:Zlotonosha_
6.21165839 Estonian_Polish
6.44019410 Ukraine_Donetska:Gorlivka_EG600026
6.46733330 Ukraine_Zakarpatska:Uzhgorod_EG600098
6.58113212 Masurian
6.66120109 Rivne_apricity
6.66235694 Ukraine_Sumska:Sumy_district_Solidarne_EG600078
6.67498315 Ukraine_Chernihivska:Kulykiv_district_Kovchyn_EG60 0060
6.71195948 Ukraine_Rivnenska:R1b8_
6.72328045 Ukraine_Rivnenska:Sarny_EG600039
6.72330276 Ukraine_Lvivska:EG600063_
6.75973372 Ukraine_Chernihivska:Ripky_district_Syberezh_EG600 055
6.88870089 Russian_Smolensk
6.91505604 Ukraine_Rivnenska:EG600044_
6.99494103 Ukraine_Sumska:EG600079_
7.00460563 Ukraine_Sumska:Lebedyn_district_Kaminne_EG600077
7.03675351 Ukraine_Rivnenska:Korets_district_Ustya_EG600040
Would you mind explaining what this shows? Thank you :)
VCF version, Eurogenes K13:
Distance to: EG600098_bigCode:EG600001_big,30.50,34.04,12.24,7.82,10.68,1.02,0,1.37,1.17,0.21,0,0.83,0.12
EG600002_big,24.10,37.84,12.97,8.44,11.50,1.23,0.84,0,1.96,0,0.23,0.41,0.47
EG600003_big,25.00,40,12.25,9.22,9.21,0,0.88,0.40,1.15,1.21,0.67,0,0
EG600004_big,27.37,33.15,13.09,5.90,15.24,1.34,0.36,1.05,1.54,0.11,0.85,0,0
EG600005_big,28.69,37.57,12.72,8.03,8.37,1.89,0.42,0.46,0.05,0.66,0.59,0.54,0
EG600006_big,29.17,42.47,12.15,4.44,7.72,0.04,1.43,0.66,1.62,0.09,0.22,0,0
EG600007_big,27.03,34.70,13.47,9.30,11.53,1.33,0.76,0,1.88,0,0,0,0
EG600008_big,24.06,32.08,17.91,6.95,12.08,1.12,1.85,0,2.58,0.90,0,0,0.46
EG600009_big,27.02,37.76,14.57,5.84,9.60,1.98,0.80,0.37,0.99,1.02,0,0,0.05
EG600010_big,25.63,35.97,13.09,7.18,13.51,0,2.60,0.53,0.09,1.20,0,0.20,0
EG600011_big,25.29,33.58,16.88,10.77,10.01,0,0,0.81,2.00,0.33,0.24,0,0.09
EG600012_big,30.35,38.54,11.31,7.64,7.36,1.72,0.42,0,1.23,0.75,0.56,0,0.12
EG600013_big,27.62,42.72,10.98,6.02,9.60,0,1.41,0,0.60,0.12,0.72,0,0.21
EG600014_big,32.08,37.05,10.87,8.23,7.54,1.25,0.71,0.24,1.89,0.13,0,0,0
EG600015_big,25.08,45.44,10.99,3.71,7.85,0.56,2.29,1.02,0.57,1.22,1.15,0,0.13
EG600016_big,27.15,42.05,12.61,9.00,3.73,0,2.75,0,1.19,1.22,0.04,0.23,0.05
EG600017_big,26.30,47.47,10.56,8.31,2.39,0.57,0.66,1.08,0.39,1.16,1.10,0,0
EG600018_big,28.10,36.12,13.54,9.82,8.08,1.11,0.11,0.93,1.21,0,0.64,0,0.34
EG600019_big,24.73,34.39,6.01,13.17,7.82,0.80,0.62,2.76,8.87,0.50,0.07,0,0.28
EG600020_big,22.19,42.80,14.33,5.36,8.24,2.67,1.81,1.06,0.80,0.49,0.20,0.06,0
EG600021_big,24.67,49.73,12.06,7.59,1.96,0.77,0,1.54,0.70,0.06,0.73,0,0.17
EG600022_big,25.62,44.11,12.10,4.06,9.27,0,2.91,0,0.54,0.55,0.20,0,0.65
EG600023_big,28.70,42.98,12.53,6.62,4.91,0.81,0.66,0,1.52,0.36,0.37,0.12,0.43
EG600024_big,31.32,38.22,11.31,8.29,5.15,0.83,1.29,0.22,1.44,1.33,0,0.59,0
EG600025_big,28.12,45.78,8.53,7.47,5.80,1.03,1.58,0,0.77,0.75,0,0.17,0
EG600026_big,27.21,44.70,10.87,3.78,6.97,1.23,0.83,0,1.77,1.05,0.51,0,1.10
EG600027_big,28.58,35.79,12.90,8.95,10.38,0,0.61,0,0.69,2.04,0,0,0.04
EG600028_big,27.32,45.30,10.32,7.61,5.42,0.29,0.96,0,2.14,0.19,0.23,0.21,0
EG600029_big,23.87,46.88,10.07,4.96,6.07,1.68,0.58,1.84,3.68,0.06,0.12,0.19,0
EG600030_big,27.20,40.14,14.58,6.44,8.07,0,1.41,0.29,0.20,1.26,0.40,0,0
EG600031_big,29.10,42.51,9.49,4.43,10.04,0,0.95,0,0.64,0.87,1.11,0.87,0
EG600032_big,23.61,38.07,13.83,9.19,9.09,1.86,1.84,0,0.93,1.48,0,0,0.10
EG600033_big,28.27,39.98,13.18,4.59,9.69,1.82,1.10,0.18,1.18,0,0,0,0
EG600034_big,25.90,41.39,10.72,6.62,10.04,1.49,0,1.08,2.32,0.16,0.29,0,0
EG600035_big,30.15,31.04,14.73,11.14,6.89,2.78,0,0.88,1.13,0.88,0.32,0.06,0
EG600036_big,30.79,36.26,12.19,7.19,8.31,0,1.15,0,2.72,0.61,0.19,0.24,0.34
EG600037_big,25.14,49.26,11.98,1.69,6.17,0,0.18,0.48,1.79,1.27,0.83,0.38,0.82
EG600038_big,24.68,45.84,11.63,9.99,3.82,0.86,0.82,0.21,1.32,0,0.83,0,0
EG600039_big,28.87,46.08,7.39,7.06,5.33,0,0.44,0,1.74,0.85,0.78,0,1.46
EG600040_big,26.87,50.04,8.80,4.14,5.23,0,0.93,0,2.04,0.62,0.31,0.06,0.97
EG600041_big,28.27,46.76,10.19,4.78,5.15,1.03,0.82,0,1.81,0.40,0.53,0.17,0.10
EG600042_big,30.35,42.05,11.37,6.65,4.69,0.99,0.78,0,0.61,1.42,0.40,0.56,0.12
EG600043_big,28.14,41.07,13.59,5.07,6.66,0.92,0.62,0,1.63,1.03,0.45,0.27,0.55
EG600044_big,26.24,48.38,10.82,2.21,6.88,0.62,0.89,0,0.03,1.59,1.62,0.75,0
EG600045_big,27.17,44.67,9.74,9.11,5.74,0,0,0,0.86,0.78,1.37,0,0.57
EG600046_big,24.33,44.04,10.75,4.78,10.62,0.85,1.09,1.73,0.41,0.53,0.38,0.48,0
EG600047_big,24.37,44.69,13.57,5.49,8.52,0.02,0,0,1.43,1.61,0,0.32,0
EG600048_big,16.33,12.32,19.48,11.35,32.08,4.78,0,0.54,0.65,0,1.03,0.63,0.81
EG600049_big,30.01,46.36,9.76,3.17,8.07,0.15,0.95,0,0.89,0.46,0,0,0.18
EG600050_big,28.73,43.38,10.46,6.76,5.25,0.65,1.74,0.04,1.11,0.31,0.32,0.34,0.91
EG600051_big,24.36,44.15,12.42,4.21,8.57,0.56,3.32,0.94,0.41,0.01,1.05,0,0
EG600052_big,22.98,51.60,8.71,5.80,6.18,0.59,0.84,0.55,0.65,0.83,0.81,0,0.45
EG600053_big,27.00,43.15,12.57,6.53,6.54,1.20,0.23,0.03,1.82,0.15,0,0.79,0
EG600054_big,27.55,46.54,6.85,8.01,6.02,1.34,1.19,1.07,1.34,0.10,0,0,0
EG600055_big,26.53,48.13,9.45,5.64,7.03,0,0.70,0.39,0.95,0.11,0.11,0.97,0
EG600056_big,25.01,48.39,8.81,7.57,6.30,0.63,0.64,0.11,1.00,0.64,0.90,0,0
EG600057_big,25.04,48.45,8.64,5.39,5.27,2.90,1.13,1.30,0,1.14,0.67,0,0.08
EG600059_big,25.08,45.26,12.26,4.23,8.68,0,1.00,0,1.64,0.45,1.39,0,0
EG600060_big,27.17,46.90,9.92,6.21,4.75,0.98,1.07,1.38,0.21,0,0.53,0.47,0.42
EG600061_big,28.94,39.19,11.53,7.25,8.92,0.83,0.77,0,0.65,0.79,0.35,0.44,0.34
EG600062_big,26.89,40.77,12.46,9.53,4.94,1.93,2.30,0,0.49,0.33,0,0.38,0
EG600063_big,26.80,47.24,10.10,5.65,6.45,1.35,0,0.43,0.72,0.39,0.85,0,0
EG600064_big,28.91,40.23,13.88,3.55,6.75,2.33,0.35,0.08,2.88,0.64,0.09,0.32,0
EG600065_big,26.24,44.16,12.98,6.43,3.79,0.87,1.70,0,2.21,0,0.62,0,1.02
EG600066_big,24.89,47.09,10.02,6.60,4.82,1.10,1.68,0.27,2.70,0.83,0,0,0
EG600067_big,28.22,51.20,7.33,5.57,1.81,1.09,1.21,0.48,1.81,0,0.11,1.16,0
EG600068_big,25.68,50.26,9.54,5.58,4.88,0.53,0.24,0.03,1.56,0.36,0.60,0,0.75
EG600069_big,28.52,48.04,8.11,5.42,5.49,1.30,0.06,1.19,0.37,0.93,0.58,0,0
EG600070_big,23.32,47.75,9.50,6.31,6.11,0.84,1.60,0.79,1.79,1.12,0.60,0.26,0
EG600071_big,27.33,44.10,11.09,6.31,4.77,1.90,0,0,2.80,1.65,0,0.06,0
EG600072_big,29.05,42.20,12.95,5.84,4.03,0.91,0,0.58,2.27,0.59,0.90,0.66,0
EG600073_big,25.69,42.85,8.52,6.31,5.62,2.71,1.03,1.02,5.52,0.42,0,0.30,0
EG600074_big,28.31,43.83,10.81,5.51,4.80,0.03,2.19,0,1.76,1.07,1.28,0,0.40
EG600075_big,23.95,52.54,7.18,6.34,3.98,2.19,2.04,0,1.38,0.41,0,0,0
EG600076_big,28.37,37.22,12.00,8.65,8.07,2.21,0.47,0.01,1.60,0,1.16,0,0.24
EG600077_big,26.77,46.54,11.05,5.25,5.60,0,0.26,0,1.72,0.83,1.53,0.46,0
EG600078_big,27.23,44.56,11.45,2.01,7.22,1.54,2.80,2.14,0.32,0,0.73,0,0
EG600079_big,26.99,45.69,8.21,5.10,9.94,0,0.16,0,1.40,1.64,0.39,0.47,0
EG600080_big,25.88,46.58,10.33,7.43,5.55,0.86,0.73,1.20,0.33,1.11,0,0,0
EG600081_big,29.13,45.25,7.60,4.19,6.18,2.18,2.75,0,1.10,0.15,0.61,0.20,0.66
EG600082_big,29.80,44.56,9.01,1.77,9.55,0.85,0.36,0,1.00,2.07,0.19,0,0.83
EG600083_big,27.90,43.48,11.28,2.54,10.07,0,1.36,0.54,2.05,0.55,0,0,0.22
EG600084_big,25.45,49.76,9.40,6.61,2.74,1.44,1.97,0,1.25,0,0.91,0,0.47
EG600085_big,26.74,48.62,9.07,7.88,2.95,0.55,1.40,2.23,0.07,0,0.48,0,0
EG600086_big,27.01,44.55,9.58,9.46,4.27,1.30,1.89,0,1.13,0.05,0,0,0.75
EG600087_big,25.20,45.53,10.16,5.48,8.24,0.37,0.94,0,3.42,0.64,0,0,0
EG600088_big,28.75,47.20,8.59,5.35,6.89,0,0,0.40,1.34,0.78,0.18,0.21,0.31
EG600089_big,29.03,36.45,13.03,7.38,8.30,0.74,1.99,0.94,1.35,0.40,0.38,0,0
EG600090_big,26.98,38.73,10.50,10.24,8.06,1.99,1.55,0,0.62,1.33,0,0,0
EG600091_big,23.34,46.94,9.62,6.84,6.98,0.93,0,1.25,1.99,0,0.65,0,1.44
EG600092_big,29.44,40.55,10.66,8.41,4.38,0,4.38,0,0.51,0.73,0.74,0.21,0
EG600093_big,21.21,30.58,10.30,13.08,16.71,1.16,3.05,0,2.09,0.37,0.55,0.11,0.78
EG600094_big,25.74,46.73,12.26,6.35,3.65,0.07,2.55,0,1.94,0.70,0,0,0
EG600095_big,28.81,40.74,11.67,5.53,8.70,1.30,1.40,0.56,1.28,0,0,0,0.01
EG600096_big,27.15,37.82,12.88,5.84,10.74,0.39,0.69,0.38,2.10,1.12,0.46,0,0.43
EG600097_big,22.02,38.81,13.64,9.47,6.57,3.92,3.77,0,1.44,0,0.36,0,0
EG600098_big,28.36,46.67,6.17,6.26,8.46,0,1.17,0.29,0.57,0.64,0.85,0.39,0.15
4.33647322 Russian_Southwest
5.09035362 Ukrainian_Belgorod
5.60973261 Belorussian
5.90778300 Russian_Smolensk
6.17799320 Estonian_Polish
Distance to: EG600097_big
7.73756422 Ukrainian_Lviv
8.39443268 Ukrainian_Ivano_Frankivsk
8.62021461 Moldova_North
8.82025510 Moldova_Ukrainian
9.64591105 Ukrainian
Distance to: EG600096_big
2.13834048 Ukrainian_Ivano_Frankivsk
4.31271376 Hungarian_Northern
4.81191230 Croat_East
4.99009018 Slovak
5.34182553 Croat_North
Distance to: EG600095_big
3.13427823 Moldova_Ukrainian
3.73188960 South_Polish
4.37098387 Ukrainian_Lviv
4.57613374 Ukrainian
4.60391138 Slovak
Distance to: EG600094_big
4.65563100 Ukrainian
5.04767273 Russian_average
5.13432566 Russian_Southwest
5.19798038 Russian_Smolensk
5.64884944 Estonian_Polish
Distance to: EG600093_big
6.74866653 Moldova_Centre
7.11032348 Moldova_average
7.71310573 Romania_Moldavia_North
8.77855911 Bosniak
8.91117276 Moldova_North
Distance to: EG600092_big
4.81888991 South_Polish
4.95505802 Ukrainian_Lviv
5.78725323 Ukrainian
6.51177395 Moldova_Ukrainian
6.54664036 Sorb_Lusatia
Distance to: EG600091_big
3.67521428 Russian_Southwest
4.39942042 Ukrainian_Belgorod
6.25652459 Russian_average
6.32514822 Moldova_Ukrainian
6.63041477 Ukrainian
Distance to: EG600090_big
5.58901601 Ukrainian_Lviv
5.95132758 Moldova_Ukrainian
6.40085932 Slovak
6.83412028 South_Polish
6.89323581 Ukrainian_Ivano_Frankivsk
Distance to: EG600089_big
2.68411997 Slovak
2.97989933 Hungarian_Northern
3.79183333 Croat_North
4.36855811 Slovenian
4.68827260 Hungarian_Alföld
Distance to: EG600088_big
3.56732393 Russian_Southwest
3.94445180 Belorussian
4.02546892 Estonian_Polish
4.11053524 Russian_Smolensk
4.77189690 Polish
Distance to: EG600087_big
3.82922969 Russian_Southwest
4.33726873 Moldova_Ukrainian
5.10211721 Ukrainian
5.78706316 Ukrainian_Belgorod
6.10759363 Russian_average
Distance to: EG600086_big
4.03673135 Ukrainian_Belgorod
4.70542240 Ukrainian_Lviv
4.95805405 Russian_Southwest
4.97136802 Ukrainian
5.67425766 Russian_Smolensk
Distance to: EG600085_big
3.67646569 Russian_Smolensk
3.94246116 Ukrainian_Belgorod
4.97036216 Russian_Southwest
5.22707375 Estonian_Polish
5.86298559 Russian_average
Distance to: EG600084_big
3.54069202 Russian_Smolensk
4.29224883 Estonian_Polish
4.74757833 Russian_average
4.90069383 Russian_Southwest
4.90315205 Ukrainian_Belgorod
Distance to: EG600083_big
4.62635926 Moldova_Ukrainian
5.78941275 Ukrainian
6.51635634 South_Polish
6.83975146 Ukrainian_Ivano_Frankivsk
7.17186168 Ukrainian_Lviv
Distance to: EG600082_big
6.54366870 Moldova_Ukrainian
6.91968930 Sorb_Lusatia
7.12302604 South_Polish
7.24631631 Ukrainian
7.31507348 Polish
Distance to: EG600081_big
4.77348929 Polish
4.79104373 Belorussian
4.85490474 Russian_Smolensk
4.95612752 Estonian_Polish
5.38083637 Russian_Southwest
Distance to: EG600080_big
3.14526628 Ukrainian_Belgorod
3.22406576 Russian_Southwest
4.40431606 Ukrainian
4.46119939 Russian_Smolensk
5.25995247 Moldova_Ukrainian
Distance to: EG600079_big
4.72617181 Russian_Southwest
5.12614865 Moldova_Ukrainian
6.34495075 Ukrainian_Belgorod
6.45300705 Ukrainian
7.00453425 Estonian_Polish
Distance to: EG600078_big
5.40858577 Ukrainian
5.69628827 Moldova_Ukrainian
6.68639664 Ukrainian_Lviv
6.69589426 Polish
6.92917022 Estonian_Polish
Distance to: EG600077_big
3.77858439 Russian_Southwest
3.86203314 Ukrainian
4.54632819 Estonian_Polish
4.58146265 Russian_Smolensk
4.91584174 Polish
Distance to: EG600076_big
4.03930687 Slovak
4.80069787 Hungarian_Northern
5.16248971 Croat_North
5.73953831 Ukrainian_Ivano_Frankivsk
5.83783350 Croat_East
Distance to: EG600075_big
6.16075482 Estonian_Polish
6.17732952 Russian_Smolensk
6.44152932 Lithuanian
6.60579291 Russian_Southwest
6.64025602 Ukrainian_Belgorod
Distance to: EG600074_big
2.53493590 Ukrainian
3.70658873 Ukrainian_Lviv
3.87942006 Polish
4.04473732 South_Polish
4.26823148 Moldova_Ukrainian
Distance to: EG600073_big
5.95427577 Russian_average
5.97740746 Ukrainian_Lviv
6.07564811 Russian_Southwest
6.11377134 Moldova_Ukrainian
6.40349124 Ukrainian
Distance to: EG600072_big
3.23314089 Ukrainian
3.28242289 Ukrainian_Lviv
3.94032994 South_Polish
4.69842527 Masurian
5.01262406 Polish
Distance to: EG600071_big
3.17472833 Ukrainian
3.41525987 Ukrainian_Lviv
4.36453892 Moldova_Ukrainian
4.74344811 Polish
5.14597901 Russian_Southwest
Distance to: EG600070_big
3.14628352 Russian_Southwest
4.10577642 Ukrainian_Belgorod
5.25899230 Russian_average
5.70645249 Russian_Smolensk
5.77228724 Estonian_Polish
Distance to: EG600069_big
2.66195417 Russian_Smolensk
2.98911358 Belorussian
3.13044725 Estonian_Polish
3.95773925 Russian_Southwest
4.58090602 Polish
Distance to: EG600068_big
3.50366950 Estonian_Polish
3.86367701 Russian_Smolensk
3.98756818 Russian_Southwest
4.79985416 Belorussian
4.92217432 Ukrainian_Belgorod
Distance to: EG600067_big
3.65692494 Lithuanian
4.05733903 Russian_Smolensk
4.24665751 Estonian_Polish
4.37298525 Belorussian
5.76225650 Russian_average
Distance to: EG600066_big
2.76705620 Russian_Southwest
3.59954164 Russian_average
3.83352318 Ukrainian_Belgorod
4.47246017 Russian_Smolensk
4.87620754 Estonian_Polish
Distance to: EG600065_big
3.34738704 Ukrainian
3.70943392 Ukrainian_Lviv
5.17116041 Moldova_Ukrainian
5.73646232 Polish
6.07241303 South_Polish
Distance to: EG600064_big
5.24274737 Ukrainian_Lviv
5.53220571 Slovak
5.58773657 Moldova_Ukrainian
5.63603584 Ukrainian
5.66362958 South_Polish
Distance to: EG600063_big
3.11711405 Russian_Southwest
3.79948681 Russian_Smolensk
4.06448029 Estonian_Polish
4.38667300 Ukrainian_Belgorod
4.77815864 Ukrainian
Distance to: EG600062_big
3.27992378 Ukrainian_Lviv
5.25246609 Ukrainian
5.48280038 Moldova_Ukrainian
5.74264747 South_Polish
7.18224199 Slovak
Distance to: EG600061_big
3.45829438 Slovak
4.25580780 Moldova_Ukrainian
4.49839972 South_Polish
4.80461237 Hungarian_Northern
4.81727101 Ukrainian_Ivano_Frankivsk
Distance to: EG600060_big
2.97546635 Russian_Smolensk
3.62514827 Russian_Southwest
3.92339139 Ukrainian_Belgorod
4.01951490 Estonian_Polish
4.12224453 Polish
Distance to: EG600059_big
4.34016129 Moldova_Ukrainian
4.99810964 Ukrainian
5.89693988 Russian_Southwest
6.37479411 Ukrainian_Lviv
7.49417774 Estonian_Polish
Distance to: EG600057_big
4.01571911 Russian_Smolensk
4.11403695 Russian_Southwest
4.29607961 Estonian_Polish
4.62884435 Ukrainian_Belgorod
5.41761940 Belorussian
Distance to: EG600056_big
2.21291663 Russian_Southwest
2.43041149 Ukrainian_Belgorod
4.59485582 Russian_Smolensk
5.25572069 Estonian_Polish
5.69595470 Russian_average
Distance to: EG600055_big
2.77497748 Russian_Southwest
4.07682474 Estonian_Polish
4.18726641 Ukrainian_Belgorod
4.23431222 Russian_Smolensk
4.84650389 Belorussian
Distance to: EG600054_big
2.60388172 Ukrainian_Belgorod
3.06934847 Russian_Southwest
4.32747039 Russian_Smolensk
5.59637383 Belorussian
5.60794971 Estonian_Polish
Distance to: EG600053_big
2.37775104 Ukrainian
2.45947149 Moldova_Ukrainian
2.71193658 Ukrainian_Lviv
4.44804451 South_Polish
5.87326996 Polish
Distance to: EG600052_big
5.62676639 Russian_Southwest
6.08972906 Ukrainian_Belgorod
6.29228893 Estonian_Polish
6.66192164 Russian_Smolensk
7.33289847 Russian_average
Distance to: EG600051_big
4.89829562 Moldova_Ukrainian
5.60697780 Ukrainian
6.44418342 Ukrainian_Lviv
7.15586473 Russian_Southwest
7.35227176 Ukrainian_Ivano_Frankivsk
Distance to: EG600050_big
2.56335717 Ukrainian
2.88024305 South_Polish
3.09155301 Ukrainian_Lviv
3.69468537 Moldova_Ukrainian
3.70631893 Polish
Distance to: EG600049_big
5.15221312 Belorussian
5.22185791 Polish
5.35413859 Estonian_Polish
5.81236613 Ukrainian
6.02601029 South_Polish
Distance to: EG600048_big
4.25487955 Ashkenazi
5.36845415 Greek_Ionia
5.89782163 Moldova_Jewish
5.93970538 Greek_Athens
6.13505501 Greek_Cyclades
Distance to: EG600047_big
4.46028026 Moldova_Ukrainian
5.14196461 Ukrainian
6.21280130 Ukrainian_Lviv
6.82467582 Russian_Southwest
7.31451297 Ukrainian_Ivano_Frankivsk
Distance to: EG600046_big
4.61265650 Moldova_Ukrainian
6.50434470 Ukrainian
6.89015965 Russian_Southwest
6.99140901 Ukrainian_Ivano_Frankivsk
7.29616338 Ukrainian_Lviv
Distance to: EG600045_big
3.99532226 Ukrainian_Belgorod
4.43218908 Ukrainian
4.45996637 Russian_Southwest
4.77300744 Ukrainian_Lviv
4.77568843 Moldova_Ukrainian
Distance to: EG600044_big
4.71729796 Estonian_Polish
5.81860808 Belorussian
5.98341040 Russian_Smolensk
6.03686177 Russian_Southwest
7.02234291 Polish
Distance to: EG600043_big
3.40424735 Ukrainian_Lviv
3.58382477 Ukrainian
3.61180011 Moldova_Ukrainian
4.26635676 South_Polish
5.26959201 Slovak
Distance to: EG600042_big
2.31894373 South_Polish
3.50396918 Ukrainian_Lviv
3.68406026 Ukrainian
3.96571557 Polish
4.16536913 Sorb_Lusatia
Distance to: EG600041_big
3.05049176 Estonian_Polish
3.09935477 Russian_Smolensk
3.39745493 Polish
3.93239113 Russian_Southwest
4.04133641 Belorussian
Distance to: EG600040_big
2.35433642 Estonian_Polish
3.43639346 Belorussian
3.79225527 Russian_Smolensk
4.28372501 Russian_Southwest
4.79783284 Russian_average
Distance to: EG600039_big
3.76937661 Russian_Southwest
4.20110700 Ukrainian_Belgorod
4.33929718 Russian_Smolensk
4.79512252 Polish
5.15675285 Belorussian
Distance to: EG600038_big
4.83175951 Ukrainian_Belgorod
5.71401785 Russian_Southwest
5.94161594 Ukrainian
5.95062182 Ukrainian_Lviv
6.81061671 Russian_Smolensk
Distance to: EG600037_big
5.49193044 Estonian_Polish
6.83734598 Russian_Southwest
6.94699935 Belorussian
7.05102829 Russian_Smolensk
7.10682770 Russian_average
Distance to: EG600036_big
2.90969071 Slovak
3.13193231 Hungarian_Northern
4.09196774 Czech
4.42099536 Croat_North
4.42846475 Slovenian
Distance to: EG600035_big
5.46489707 Hungarian_Transdanubia+Budapest
5.86116883 Hungarian
6.07856891 Hungarian_Alföld
6.42592406 Croat_North
6.83603686 Slovenian
Distance to: EG600034_big
3.26873064 Moldova_Ukrainian
4.99139259 Ukrainian_Ivano_Frankivsk
5.49876350 Ukrainian_Lviv
5.78733963 Ukrainian
6.51342460 South_Polish
Distance to: EG600033_big
3.33307666 Ukrainian_Ivano_Frankivsk
4.54669110 Moldova_Ukrainian
4.69930846 Slovak
5.49235833 Hungarian_Northern
5.71497157 South_Polish
Distance to: EG600032_big
5.25749941 Ukrainian_Ivano_Frankivsk
5.41020332 Moldova_North
6.11404122 Croat_East
7.22687346 Moldova_Ukrainian
7.23405142 Ukrainian_Lviv
Distance to: EG600031_big
4.16650933 Moldova_Ukrainian
5.17210789 South_Polish
5.83588040 Ukrainian
5.84517750 Sorb_Lusatia
6.64329737 Ukrainian_Lviv
Distance to: EG600030_big
4.30977958 Ukrainian_Ivano_Frankivsk
4.45688232 Moldova_Ukrainian
4.78662721 Ukrainian_Lviv
5.13956224 Slovak
5.15203843 Ukrainian
Distance to: EG600029_big
4.26208869 Russian_Southwest
4.80005208 Russian_average
5.81937282 Ukrainian_Belgorod
5.97298920 Estonian_Polish
6.33385349 Russian_Smolensk
Distance to: EG600028_big
3.19942182 Ukrainian
3.44646195 Russian_Southwest
3.99457132 Ukrainian_Belgorod
4.26884059 Moldova_Ukrainian
4.32046294 Ukrainian_Lviv
Distance to: EG600027_big
3.79500988 Croat_North
3.80285419 Croat_East
3.85379034 Hungarian_Northern
4.34050688 Hungarian_Alföld
4.51382321 Croat
Distance to: EG600026_big
3.67309134 Ukrainian
3.72033601 Moldova_Ukrainian
4.99970999 Ukrainian_Lviv
5.10025490 Russian_Southwest
5.25442671 Polish
Distance to: EG600025_big
3.22518217 Russian_Southwest
3.34740198 Ukrainian_Belgorod
3.82819801 Russian_Smolensk
4.28231246 Polish
4.64288703 Ukrainian
Distance to: EG600024_big
4.20402188 Czech
4.24255819 Slovak
4.65176311 South_Polish
5.39721224 Sorb_Lusatia
5.74008711 Ukrainian_Lviv
Distance to: EG600023_big
2.01198907 Ukrainian
2.38520439 Ukrainian_Lviv
3.09113248 South_Polish
3.87406763 Moldova_Ukrainian
4.32979214 Polish
Distance to: EG600022_big
4.16900468 Moldova_Ukrainian
5.23250418 Ukrainian
6.38753474 Ukrainian_Lviv
6.82707844 Ukrainian_Ivano_Frankivsk
6.92649262 Russian_Southwest
Distance to: EG600021_big
6.02981758 Russian_Smolensk
6.46107576 Ukrainian_Belgorod
6.68928247 Russian_average
6.80830375 Estonian_Polish
6.86110778 Russian_Southwest
Distance to: EG600020_big
6.30666314 Moldova_Ukrainian
6.87138996 Ukrainian_Lviv
6.91744172 Ukrainian_Ivano_Frankivsk
7.16727982 Ukrainian
9.17189730 Russian_Southwest
Distance to: EG600019_big
10.18944061 Tatar
12.80799360 Moldova_North
13.53025129 Croat_East
14.22939212 Hungarian_Alföld
14.29211321 Hungarian_Northern
Distance to: EG600018_big
4.59252654 Croat_North
4.84254066 Slovak
4.95462410 Hungarian_Northern
5.10363596 Croat_East
5.15381412 Hungarian_Alföld
Distance to: EG600017_big
4.43918912 Ukrainian_Belgorod
4.46242087 Russian_Smolensk
5.23366984 Russian_Southwest
5.69399684 Russian_average
5.80948363 Polish
Distance to: EG600016_big
3.61346094 Ukrainian_Lviv
4.36222420 Ukrainian
5.62040924 South_Polish
5.69916661 Moldova_Ukrainian
6.78387795 Polish
Distance to: EG600015_big
4.77734236 Moldova_Ukrainian
5.06532329 Ukrainian
5.37655094 Russian_Southwest
6.40855678 Ukrainian_Lviv
6.50866346 Estonian_Polish
Distance to: EG600014_big
3.50405479 Czech
3.54393849 Slovak
4.87739685 Hungarian_Northern
5.63364003 Slovenian
5.77214865 South_Polish
Distance to: EG600013_big
2.33997863 Moldova_Ukrainian
4.42033935 Ukrainian
4.72182168 South_Polish
5.09979411 Ukrainian_Lviv
5.84327819 Ukrainian_Ivano_Frankivsk
Distance to: EG600012_big
2.91424090 Slovak
4.22906609 South_Polish
4.25355146 Czech
5.04298523 Hungarian_Northern
5.07725319 Ukrainian_Lviv
Distance to: EG600011_big
4.01986318 Moldova_North
5.11311060 Croat_East
5.29318430 Bosniak
5.34283633 Croat_South
5.41383413 Croat
Distance to: EG600010_big
4.03523234 Croat_East
4.59668359 Ukrainian_Ivano_Frankivsk
5.25044760 Croat
5.30255599 Moldova_North
5.34436151 Bosniak
Distance to: EG600009_big
2.39313602 Ukrainian_Ivano_Frankivsk
4.57710607 Hungarian_Northern
4.65009677 Slovak
4.86648744 Croat_North
4.93243348 Croat_East
Distance to: EG600008_big
4.49782169 Croat_South
4.52785821 Bosniak
4.73437430 Serb_north
5.20319133 Moldova_North
5.31494120 Romania_Moldavia_North
Distance to: EG600007_big
1.91841080 Croat_East
3.29736258 Croat
3.73428708 Moldova_North
3.99842469 Hungarian_Alföld
4.45922639 Croat_North
Distance to: EG600006_big
3.24478042 Moldova_Ukrainian
3.30110588 Ukrainian
3.33135108 South_Polish
4.56070170 Ukrainian_Lviv
4.93231183 Sorb_Lusatia
Distance to: EG600005_big
3.07894462 Slovak
4.18972553 Hungarian_Northern
4.45674769 Croat_North
5.13961088 Ukrainian_Ivano_Frankivsk
5.19970191 Slovenian
Distance to: EG600004_big
4.14996386 Croat_West
4.39901125 Croat_East
4.45416659 Croat
4.64625656 Croat_South
4.99651879 Bosniak
Distance to: EG600003_big
4.78430768 Moldova_Ukrainian
5.19917301 Ukrainian_Ivano_Frankivsk
5.69350507 Ukrainian_Lviv
6.57876128 Ukrainian
7.04225816 Croat_East
Distance to: EG600002_big
3.94616269 Ukrainian_Ivano_Frankivsk
4.33384356 Moldova_North
4.70014893 Croat_East
6.65668837 Bosniak
6.75316963 Croat
Distance to: EG600001_big
2.90466866 Hungarian_Northern
2.94525041 Croat_North
2.98219718 Hungarian
3.12341160 Hungarian_Transdanubia+Budapest
3.17272753 Hungarian_Alföld
0.971134 genotype rate in K13 with my version, slightly better.Quote:
Originally Posted by vbnetkhio
Yes, this array.zip version is crap. You should delete it from GEDmatch, lol.Quote:
Originally Posted by vbnetkhio
Here is K15 from array.zip version:
Code:EG600002_small,15.72,6.73,21.28,24.93,12.91,9.08,6.19,1.15,0.58,0,0.50,0,0.51,0.23,0.18
EG600003_small,13.60,22.56,22.03,14.90,5.69,6.69,9.03,0,1.05,2.62,0,0,0.71,0,1.12
EG600004_small,16.02,17.26,28.28,12.14,7.68,0,15.05,0,0.02,1.75,1.80,0,0,0,0
EG600005_small,16.56,16.37,22.59,21.87,5.57,7.21,7.73,0.38,0,0,0,0,0.87,0,0.86
EG600006_small,22.21,14.28,27.97,18.28,8.55,0,7.12,0,0,0,1.45,0,0.14,0,0
EG600007_small,21.59,14.97,25.87,13.18,8.80,3.49,10.02,0.24,0,0,1.80,0,0.03,0,0
EG600008_small,21.92,11.92,17.22,13.89,14.05,5.49,9.19,0,4.57,0.52,0,1.22,0,0,0
EG600009_small,17.05,21.36,25.15,15.75,7.35,2.79,8.31,0,0.29,0.53,0,0.70,0,0,0.71
EG600010_small,18.23,12.77,22.38,14.39,9.66,5.63,12.04,0,4.42,0,0,0.05,0,0,0.42
EG600011_small,17.66,12.06,22.28,17.40,13.00,5.62,10.27,0,0,0,0,1.42,0.30,0,0
EG600012_small,15.92,16.11,23.20,21.47,7.00,4.93,8.16,0.88,1.69,0,0,0.47,0.16,0,0
EG600013_small,18.29,17.69,24.51,15.73,6.86,5.69,7.42,0.96,0.99,0,0.07,0,1.09,0,0.70
EG600014_small,19.45,16.14,29.93,15.90,4.96,8.48,1.68,0.15,0.33,0,1.41,0.49,0,1.10,0
EG600015_small,17.58,13.59,33.40,18.16,5.21,2.02,7.27,0,0,1.35,0,0.42,0.21,0,0.78
EG600016_small,23.06,14.59,28.18,12.41,7.56,10.60,0,0,1.03,0,0,0.53,0.70,0.18,1.16
EG600017_small,14.24,10.56,33.55,19.15,8.89,9.67,0,0.47,0,1.21,0,1.06,1.20,0,0
EG600018_small,14.24,13.63,27.94,18.94,10.41,8.18,1.50,1.77,0,0,1.07,0,0.36,1.90,0.05
EG600019_small,13.42,16.72,21.66,18.01,4.22,11.90,0.15,1.60,1.25,1.99,6.62,0.20,0,2.25,0
EG600020_small,14.22,13.25,25.69,22.03,10.41,4.31,5.18,0.26,4.65,0,0,0,0,0,0
EG600021_small,7.96,19.25,31.95,25.48,6.52,6.73,0,0,0,0.91,0.50,0,0.69,0,0
EG600022_small,15.17,12.76,28.54,19.05,11.46,1.78,7.83,0,1.36,0,0,0,0,0,2.04
EG600023_small,18.12,20.38,26.65,20.23,4.53,8.71,0,0,0,0,0,0,0.43,0,0.94
EG600024_small,18.76,9.77,24.44,20.50,8.18,8.81,4.82,0.73,2.01,0,0,1.49,0.49,0,0
EG600025_small,10.31,25.64,28.02,26.32,0.41,5.89,0,1.45,0,0,0,0.25,0.65,1.06,0
EG600026_small,19.97,14.58,26.47,21.77,9.63,4.63,0.61,0,0.24,0.48,0,0.87,0.76,0,0
EG600027_small,20.60,14.38,22.32,15.20,7.91,10.08,4.98,0,3.88,0,0.08,0,0.57,0,0
EG600028_small,17.90,21.89,32.62,16.77,0.43,8.50,0,0,0,0.40,1.36,0,0,0.13,0
EG600029_small,15.01,9.99,32.84,22.24,2.20,7.98,1.80,1.90,0,1.19,1.46,2.17,1.18,0.05,0
EG600030_small,29.39,9.74,22.65,14.65,12.74,2.47,4.60,0,3.25,0,0,0,0.51,0,0
EG600031_small,16.41,17.85,23.92,25.98,5.37,3.45,5.36,0,0,0,0,0.25,1.42,0,0
EG600032_small,20.57,13.13,23.27,18.28,9.96,9.00,1.43,1.87,1.72,0,0,0,0.76,0,0
EG600033_small,15.04,22.86,29.40,13.43,6.77,1.21,10.57,0,0,0,0,0,0.73,0,0
EG600034_small,22.67,2.22,25.38,20.37,11.75,4.26,9.52,0,0,2.06,1.77,0,0,0,0
EG600036_small,16.46,24.52,22.90,13.14,5.16,10.81,1.07,0,2.48,0.44,2.34,0,0,0.62,0.06
EG600037_small,22.05,16.78,31.91,16.87,4.95,2.88,0,0,0,0,1.08,0.21,2.18,0.73,0.36
EG600039_small,23.80,21.44,25.09,22.61,0.26,2.28,0,0,0.72,0,0,1.73,1.02,0.95,0.12
EG600040_small,19.32,14.70,30.08,23.04,6.94,2.10,0.30,0,2.28,0.65,0,0.39,0,0.19,0
EG600041_small,24.33,10.08,30.50,21.66,9.07,0.54,0.55,1.05,0.76,0,0.57,0.20,0.30,0.38,0
EG600042_small,20.74,15.59,22.36,25.40,8.42,4.19,1.04,1.28,0.30,0,0,0.67,0,0,0
EG600043_small,20.46,8.08,27.73,20.92,12.26,3.54,1.95,1.07,0,0.40,1.21,1.87,0,0.52,0
EG600044_small,17.29,22.79,26.99,17.81,2.20,7.72,2.21,0,0,0.06,0,0.49,1.33,0,1.12
EG600045_small,31.05,15.20,27.95,12.25,5.40,5.04,0,0,0,0.68,0,1.12,0.91,0.37,0
EG600046_small,18.20,12.06,25.61,24.11,5.35,0,9.37,1.08,1.73,2.13,0,0,0,0.36,0
EG600047_small,6.72,18.16,34.77,21.22,10.07,5.92,2.70,0,0,0,0,0,0,0.44,0
EG600048_small,12.35,5.57,6.51,6.64,18.32,13.78,29.28,3.88,0,0,0,0,1.23,2.46,0
EG600049_small,16.93,22.95,33.94,15.07,2.42,4.17,2.11,0,0.40,0.92,0.80,0,0,0,0.31
EG600050_small,13.18,16.40,32.37,23.95,4.32,6.85,1.33,0,0.78,0,0.05,0,0,0.75,0
EG600051_small,24.88,9.59,27.12,16.24,9.43,3.63,3.99,0,3.37,0.16,0,0.06,1.54,0,0
EG600052_small,23.08,3.97,36.27,22.56,4.59,0.25,8.75,0,0,0,0,0.21,0.32,0,0
EG600053_small,16.03,20.52,26.94,18.92,8.93,4.38,0,2.84,0,0,1.09,0,0,0.36,0
EG600054_small,22.33,12.05,28.69,21.19,2.40,8.18,3.48,0,1.08,0.51,0,0,0.09,0,0
EG600056_small,16.15,10.82,38.19,23.47,2.24,2.31,6.29,0,0,0,0,0.53,0,0,0
EG600057_small,19.59,9.67,32.66,22.12,8.02,0.61,3.45,1.52,1.18,0,0,0.15,0.93,0,0.10
EG600060_small,19.47,7.91,34.23,18.65,7.28,5.63,1.33,2.18,1.50,0,0.71,0,1.11,0,0
EG600061_small,22.25,10.44,28.03,17.67,8.02,10.20,1.00,0,0,0,0,0.24,0,1.14,1.01
EG600063_small,18.12,14.33,31.07,17.44,8.20,7.38,0,0.84,0.69,0.25,0,1.29,0.40,0,0
EG600065_small,25.42,8.08,31.17,18.99,8.60,1.52,1.34,0,2.81,0,0,0.34,0.72,0,1.01
EG600066_small,22.43,12.06,28.74,20.54,4.24,8.19,0,1.48,2.27,0,0.03,0.01,0,0,0
EG600067_small,23.05,12.93,32.35,21.73,2.74,1.00,0,0,2.63,0.95,1.37,0,0.03,1.23,0
EG600068_small,13.72,15.52,34.95,22.80,2.12,8.70,0,1.28,0,0,0,0,0.90,0,0
EG600069_small,23.57,11.29,29.76,21.05,8.25,3.93,0.15,0.67,0,0.08,0,1.25,0,0.01,0
EG600070_small,14.62,13.24,29.38,22.51,7.86,2.77,4.53,0.64,3.08,0,0,0,1.36,0,0
EG600071_small,18.57,9.52,28.40,23.11,6.57,8.62,1.98,0,0,0,1.57,1.36,0.28,0.03,0
EG600073_small,24.23,13.47,23.87,21.86,0.87,9.35,0,1.11,0,0.82,3.35,0.77,0,0.31,0
EG600074_small,22.79,19.29,32.05,8.77,7.98,2.44,0,0.76,2.70,0,2.55,0.41,0,0.26,0
EG600075_small,26.87,4.41,30.80,26.08,1.62,6.16,1.06,0.40,2.53,0,0,0,0,0.07,0
EG600076_small,22.47,10.41,21.82,12.40,9.80,11.41,6.82,3.29,0,0,0,0,1.57,0,0
EG600077_small,21.97,18.67,33.38,15.17,1.94,3.69,2.13,0.12,0,0.72,0,0.49,0.62,1.10,0
EG600078_small,19.18,16.97,29.34,16.03,6.66,0,2.76,3.97,0.49,0,2.63,0.25,1.55,0,0.19
EG600079_small,15.84,22.09,31.24,16.11,0.80,3.79,7.75,0.25,0.06,0,0,2.08,0,0,0
EG600081_small,24.70,14.70,27.21,15.77,4.86,1.90,3.45,0.43,5.42,0.04,0,0,1.09,0.43,0
EG600082_small,19.62,12.26,29.91,20.55,8.11,0,7.06,0,0,0,0,1.42,0.48,0.60,0
EG600084_small,17.18,14.85,33.88,18.90,2.69,6.87,1.85,1.87,0,0,0,0,1.34,0.38,0.20
EG600085_small,16.43,15.19,33.61,21.30,3.23,9.53,0,0,0.29,0.22,0,0,0.20,0,0
EG600087_small,14.56,15.69,29.61,23.61,3.24,4.07,5.01,2.05,1.63,0,0,0,0.53,0,0
EG600088_small,18.52,13.08,38.29,17.32,5.79,2.82,2.16,0,0,0.10,0.57,0,0,0,1.34
EG600089_small,24.08,18.00,23.64,12.27,5.60,6.93,5.97,0.70,0,0,1.92,0,0.88,0,0
EG600090_small,27.55,9.91,20.40,19.83,4.76,8.82,5.42,2.38,0,0,0,0.95,0,0,0
EG600091_small,17.15,10.96,27.23,24.08,8.54,7.05,0.63,0,0,0,1.76,0,1.88,0.32,0.38
EG600092_small,24.56,14.22,24.91,20.72,8.38,1.91,1.43,0,1.90,0,0.18,1.78,0,0,0
EG600093_small,10.81,18.65,16.61,14.36,7.33,15.16,5.77,2.84,5.94,0,0,1.16,1.24,0,0.14
EG600094_small,29.42,8.74,27.11,21.78,4.54,5.45,0,0,2.13,0,0.59,0,0,0,0.24
EG600095_small,22.57,13.54,24.59,18.87,6.30,2.95,6.48,2.67,0.21,0,1.84,0,0,0,0
EG600096_small,19.92,6.71,25.63,19.24,12.63,7.34,5.23,0,0,2.38,0,0.20,0.72,0,0
EG600097_small,21.36,8.41,22.68,17.39,13.89,6.04,5.58,1.27,2.44,0,0,0,0.95,0,0
EG600098_small,21.07,17.04,27.83,21.56,5.07,1.27,0.78,0.21,1.26,2.09,0,0.88,0.01,0,0.92
QC_sample(EUR)_small,33.64,35.50,14.63,6.79,0.60,5.25,0,0,2.13,0,0,0,0,1.47,0
yeah, they probably won't get proper matches either. could you upload EG600019 and EG600093 to gedmatch? or send them to me in the "gedmatch friendly" fromat.Quote:
Originally Posted by Peterski
Quote:
Originally Posted by Peterski
Can you also post Belarussians from Minsk in K-13?
I've been waiting on that for quite some time but I think he will :)Quote:
Originally Posted by smd555
Hmm, another similar one from that region...Quote:
Originally Posted by Ion Basescul
North_Atlantic 20.83 Pct Baltic 34.69 Pct West_Med 10.03 Pct West_Asian 14.24 Pct East_Med 13.21 Pct Red_Sea 3.81 Pct South_Asian 1.47 Pct East_Asian - Siberian 0.75 Pct Amerindian - Oceanian 0.94 Pct Northeast_African - Sub-Saharan -
M906143
GrandparentQuote:
Originally Posted by Ion Basescul
North_Atlantic 15.03 Pct Baltic 27.69 Pct West_Med 15.95 Pct West_Asian 10.28 Pct East_Med 23.58 Pct Red_Sea 5.16 Pct South_Asian - East_Asian 0.61 Pct Siberian 1.03 Pct Amerindian 0.06 Pct Oceanian 0.46 Pct Northeast_African 0.15 Pct Sub-Saharan -
M132650
I verified the matches and there is a founder effect that is typical of Jewish ancestry for the gandparent. So the grandparent looks half Jewish or more autosomally and the nephew 1/8 or more.
This means that for these guys from below that were discussed earlier in the thread, the situation could be the same and the distortion is due to Jewish admixture. The distinguishing factor uniting all 3 is low NA compared to Baltic, significantly lower West Med when compared to West Asian and East Med, and West Asian and East Med values that have similar percentages.
o_Ukraine_Luhansk:Lugansk_EG600093,21.22,30.61,10. 26,13.11,16.73,1.18,3.00,0.01,2.06,0.37,0.52,0.21, 0.73
o_Ukraine_Zaporizka:r1a2b,19.89,33.73,9.27,17.00,1 4.19,1.14,2.42,0.00,0.00,1.31,0.00,1.07,0.00
EG600093 is Jewish admixed for sure. His matches are still loading so I won't post them yet, but it's mostly Jews.Quote:
Originally Posted by Ion Basescul
There are just 2 Croats and 2 Serbs from 4.6-5.2 generations which means 200-300 years ago, so it would fit with that Serb settlement.
The more northern plotting Jews are identical to south Italians or Greeks, combine it with some Ukrainian, and you get a south Slavic-like mixture.
the one from Zaporozhie looks specifficaly Ukrainian + Caucasian or Anatolian. I don't think Jewish ancestry can be like that. Ashkenazi Jewish at least.
you can check his matches:
ZU7033837 Cossacks_Zaporozhie_r1a2b
There is a Goldberg in top 50 and they have Jewish matches in common. But I agree that if they have Jewish ancestry, then it is very distant, like 1/64+.Quote:
Originally Posted by vbnetkhio
https://i.ibb.co/hDRvcPj/image.png
Quote:
Originally Posted by Aspirin
They finished matching.Quote:
Originally Posted by Alenka
MW9108673 Lugansk - mostly matches Jews.
YT1935093 Chernivtsi - West/East Slavs, Balts, Hungarians, a couple of Spanish strong matches.
Spanish matches can mean Sephardic Jewish ancestryQuote:
Originally Posted by vbnetkhio
the Plink version got matches with decent overlap.Quote:
Originally Posted by Peterski
and your .vcf version got detected as less then 2000 snps and now doesn't work anymore :noidea:
That is weird. You downloaded the file so you can see that it has 0.971134 genotype rate with K13.
This Ukrainian is a very close match, so possibly also from ChernivtsiQuote:
Originally Posted by vbnetkhio
QM7862534
North_Atlantic 27.9 Pct Baltic 39.3 Pct West_Med 13.46 Pct West_Asian 6.2 Pct East_Med 8.22 Pct Red_Sea - South_Asian 1.76 Pct East_Asian - Siberian 2.05 Pct Amerindian 0.61 Pct Oceanian 0.47 Pct Northeast_African - Sub-Saharan -
M464439, this other Ukrainian matches closely the one from above
North_Atlantic 26.84 Pct Baltic 34.9 Pct West_Med 15.12 Pct West_Asian 5.03 Pct East_Med 15.08 Pct Red_Sea 0.34 Pct South_Asian - East_Asian 0.87 Pct Siberian 0.41 Pct Amerindian 0.52 Pct Oceanian 0.22 Pct Northeast_African 0.67 Pct Sub-Saharan -
I guess still nobody check this file and look on column which indicates mixed ancestry of some samples, which could be excluded from averages?
ftp://parrot.genomics.cn/gigadb/pub/...mples_list.csv
EG6000# Geographical coordinates Snigle source origin local ancestry Multiple sources of local ancestry - parents from different regions 1 48.011173, 24.114424 yes 2 48.353582, 22.901122 no 3 48.541686, 22.988396 yes 4 48.186729, 23.572066 no 5 48.560091, 22.479349 yes 6 49.108510, 23.641393 yes 7 48.391403, 22.902553 yes 8 48.710527, 22.595823 yes 9 48.654261, 22.811705 no 10 48.162638, 22.960819 11 48.069389, 23.738057 yes 12 49.528496, 24.776199 yes 13 46.752702, 36.837771 no 14 49.517270, 23.207126 no 15 49.082408, 33.431636 no 16 48.865431, 22.444547 no mixed 17 51.426284, 26.137811 yes 18 48.877627, 23.073250 yes 19 48.386021, 25.931838 no mixed 20 48.889200, 22.455021 no 21 51.203209, 24.716882 no 22 48.781277, 31.652828 no 23 50.006127, 36.302679 no 24 49.411124, 24.611856 no 25 48.851357, 37.585255 no mixed 26 48.313385, 38.076901 no 27 48.156197, 23.134983 no 28 51.328593, 28.812374 no 29 48.060289, 37.960431 no 30 49.133426, 25.201764 no 31 45.957438, 33.797891 no 32 48.426380, 23.700904 yes 33 49.520072, 23.201532 no 34 48.614810, 22.267959 no mixed 35 48.152747, 23.031586 no 36 48.624666, 22.294577 no mixed 37 50.975990, 26.715494 no 38 50.974947, 26.723256 no 39 51.340042, 26.611015 no 40 50.788551, 27.206422 yes 41 51.391456, 26.400927 yes 42 50.618438, 26.237382 no 43 50.621189, 26.231702 no 44 50.623217, 26.234406 no 45 50.858774, 28.560945 yes 46 50.267850, 28.662730 no 47 50.269016, 28.661282 no 48 50.261637, 28.677854 no mixed 49 50.336109, 28.767902 no 50 50.258950, 28.694822 no 51 51.501728, 31.290201 no mixed 52 51.463387, 30.928186 no 53 50.989994, 31.137039 yes 54 51.377750, 30.854611 yes 55 51.674263, 31.141482 yes 56 51.506650, 31.270636 no 57 51.802883, 31.087032 yes 58 51.460212, 31.563338 no 59 51.561099, 31.152163 no 60 51.442333, 31.688016 no 61 49.527191, 23.977288 no 62 49.839069, 24.022715 no 63 49.839069, 24.022715 no mixed 64 49.844511, 24.018296 no mixed 65 48.473548, 35.009659 no 66 48.474874, 35.006919 no 67 48.475498, 34.920716 no 68 48.479730, 34.915523 no mixed 69 48.511667, 35.061040 no 70 48.513494, 35.058948 no 71 48.576882, 35.097688 no 72 48.472600, 35.009137 no 73 48.474200, 35.007077 no 74 48.541139, 34.857161 no 75 50.265216, 28.674057 no 76 48.586074, 22.479541 no 77 50.458802, 34.291507 no 78 50.903916, 34.645784 no 79 50.908857, 34.805298 no 80 50.305129, 34.895146 no 81 50.864400, 35.260856 no 82 50.930733, 34.771132 no 83 50.557910, 35.370609 no 84 50.890445, 34.817631 no 85 50.902139, 34.814560 no 86 50.907566, 34.784693 no 87 48.788948, 30.027352 no 88 48.440321, 22.721470 no mixed 89 49.153394, 23.032793 no 90 49.473181, 24.129274 no 91 49.800393, 30.118547 no mixed 92 48.515526, 32.249134 no mixed 93 48.563362, 39.315403 no 94 48.609951, 22.287960 no mixed 95 48.612377, 22.287939 no mixed 96 48.612281, 22.285509 no mixed 97 48.737593, 22.472083 no 98 48.634126, 22.271575 no mixed
by this they mean from different regions of Ukraine?Quote:
Originally Posted by Lucas
It is obvious for me in case of 4th column.Quote:
Originally Posted by vbnetkhio
Also third column means for me if "no" for "Single source origin local ancestry" that parents are from the same region but different places,
"yes" means one place (village or city) for both parents.
Which one is this?:
o_Ukraine_Zaporizka:r1a2b
one of the "Cossacks" from The peopling of Eurasia datasetQuote:
Originally Posted by Peterski
Zhytomyr Oblast average is closest to Kiev average from the other dataset.
Which confirms the validity of Kiev average (23 samples, without outliers).
On the other hand, Lviv Oblast average is very Carpathian Rusyn-like.
Quote:
Originally Posted by Peterski
I forgot about one sample, here it is:Quote:
Originally Posted by Peterski
Eurogenes K13:
Dodecad K12b:Code:Kiev28,24.76,46.87,11.21,7.42,6.42,0.88,0.66,1.64,0,0,0.03,0.11,0
Code:Kiev28,3.18,0,0,1.79,22.31,55.61,0,0,1.34,0,15.78,0